TomoSeq data search

Data search

Results for MligTC455_47354

Cluster

Total UMI counts

Global CPM

Transcripts

Categories

Human homolog

Annotation

MligTC455_47354

2675

55.74

Mlig455_008518

Neo: -

Age: logFC(26M/2M)=0.599

Region-enriched R8: 2.131/0.00004
Region-enriched R7: 2.041/0.00000

RCN3

Mlig455_008518 {REF} {Length: 2227} {Pfam: EF hand [PF00036.34, score=68.4]; EF-hand domain pair [PF13499.8, score=61.0]; EF-hand domain [PF13405.8, score=44.6]; EF hand [PF13202.8, score=43.1]; Secreted protein acidic and rich in cysteine Ca binding region [PF10591.11, score=26.0]; EF-hand domain pair [PF13833.8, score=25.2]} {Human: ENSG00000142552, RCN3, reticulocalbin 3, [Score=168, Expect=5e-49]; ENSG00000049449, RCN1, reticulocalbin 1, [Score=167, Expect=1e-48]; ENSG00000128595, CALU, calumenin, [Score=166, Expect=2e-48]} {Mouse: ENSMUSG00000019539, Rcn3, reticulocalbin 3, EF-hand calcium binding domain, [Score=168, Expect=4e-49]; ENSMUSG00000029767, Calu, calumenin, [Score=166, Expect=1e-48]; ENSMUSG00000005973, Rcn1, reticulocalbin 1, [Score=165, Expect=4e-48]} {Dmel: FBgn0025682, scf, supercoiling factor, [Score=169, Expect=1e-49]} {Celegans: WBGene00019760, calu-1, CALUmenin (Calcium-binding protein) homolog; Calumenin-like protein, [Score=166, Expect=6e-49]} {Smed: dd_Smed_v6_1417_0_1, dd_Smed_v6_1417_0_1, [Score=183, Expect=1e-55]} {RNA1509_12383} {RNA1310_2693.1} {RNA815_747.1}

Cumulative graph for MligTC455_47354

Region-enriched expression

Region	logFC	logCPM	Pvalue	FDR	Specificity
RegionR1	0.097	5.794	0.90808	1.00000
RegionR2	-1.765	5.794	0.00025	0.00779
RegionR3	0.622	5.794	0.08582	0.51773
RegionR4	-0.288	5.794	0.57671	0.89371
RegionR5	-1.474	5.794	0.00072	0.00787
RegionR6	-1.364	5.794	0.00238	0.06853
RegionR7	2.041	5.794	0.00000	0.00000
RegionR8	2.131	5.794	0.00000	0.00004

Regeneration-enriched expression

Region	logFC	logCPM	PValue	FDR	Specificity
RegenerationR1	-0.224	5.794	0.83435	1.00000
RegenerationR2	0.822	5.794	0.08947	0.47832
RegenerationR3	0.476	5.794	0.33034	0.75620
RegenerationR4	0.678	5.794	0.18995	0.63431
RegenerationR5	1.089	5.794	0.02902	0.28700
RegenerationR6	1.322	5.794	0.01102	0.12978
RegenerationBL	0.474	5.794	0.25516	0.61224
RegenerationTP	0.207	5.794	0.63759	0.98205

Genes with expression patterns similar to MligTC455_47354

Nr.	Cluster	Total UMI counts	Global CPM	Transcripts	Categories	Human homolog	Σ Spearman correlations	Int1	Int2	Int3	Reg1	Reg2	Reg3	Annotation
1.	MligTC455_47354	2675	55.74	Mlig455_008518	Neo: - Age: logFC(26M/2M)=0.599 Region-enriched R8: 2.131/0.00004 Region-enriched R7: 2.041/0.00000	RCN3	6	1.000	1.000	1.000	1.000	1.000	1.000	Mlig455_008518 {REF} {Length: 2227} {Pfam: EF hand [PF00036.34, score=68.4]; EF-hand domain pair [PF13499.8, score=61.0]; EF-hand domain [PF13405.8, score=44.6]; EF hand [PF13202.8, score=43.1]; Secreted protein acidic and rich in cysteine Ca binding region [PF10591.11, score=26.0]; EF-hand domain pair [PF13833.8, score=25.2]} {Human: ENSG00000142552, RCN3, reticulocalbin 3, [Score=168, Expect=5e-49]; ENSG00000049449, RCN1, reticulocalbin 1, [Score=167, Expect=1e-48]; ENSG00000128595, CALU, calumenin, [Score=166, Expect=2e-48]} {Mouse: ENSMUSG00000019539, Rcn3, reticulocalbin 3, EF-hand calcium binding domain, [Score=168, Expect=4e-49]; ENSMUSG00000029767, Calu, calumenin, [Score=166, Expect=1e-48]; ENSMUSG00000005973, Rcn1, reticulocalbin 1, [Score=165, Expect=4e-48]} {Dmel: FBgn0025682, scf, supercoiling factor, [Score=169, Expect=1e-49]} {Celegans: WBGene00019760, calu-1, CALUmenin (Calcium-binding protein) homolog; Calumenin-like protein, [Score=166, Expect=6e-49]} {Smed: dd_Smed_v6_1417_0_1, dd_Smed_v6_1417_0_1, [Score=183, Expect=1e-55]} {RNA1509_12383} {RNA1310_2693.1} {RNA815_747.1}
2.	MligTC455_47355	4977	103.69	Mlig455_008548	Neo: - Age: - Region-enriched R8: 2.148/0.00000 Region-enriched R7: 2.100/0.00000	RCN3	5.274	0.972	0.861	0.790	0.762	0.969	0.920	Mlig455_008548 {REF} {Length: 1663} {Pfam: EF hand [PF00036.34, score=68.6]; EF-hand domain pair [PF13499.8, score=60.7]; EF hand [PF13202.8, score=45.1]; EF-hand domain [PF13405.8, score=44.6]; Secreted protein acidic and rich in cysteine Ca binding region [PF10591.11, score=27.7]; EF-hand domain pair [PF13833.8, score=26.1]} {Human: ENSG00000142552, RCN3, reticulocalbin 3, [Score=168, Expect=7e-49]; ENSG00000128595, CALU, calumenin, [Score=166, Expect=2e-48]; ENSG00000049449, RCN1, reticulocalbin 1, [Score=166, Expect=4e-48]} {Mouse: ENSMUSG00000019539, Rcn3, reticulocalbin 3, EF-hand calcium binding domain, [Score=168, Expect=5e-49]; ENSMUSG00000029767, Calu, calumenin, [Score=166, Expect=2e-48]; ENSMUSG00000005973, Rcn1, reticulocalbin 1, [Score=164, Expect=2e-47]} {Dmel: FBgn0025682, scf, supercoiling factor, [Score=171, Expect=3e-50]} {Celegans: WBGene00019760, calu-1, CALUmenin (Calcium-binding protein) homolog; Calumenin-like protein, [Score=166, Expect=7e-49]} {Smed: dd_Smed_v6_1417_0_1, dd_Smed_v6_1417_0_1, [Score=184, Expect=1e-55]} {RNA1509_12383} {RNA1310_2693.1, RNA1509_12383} {RNA1509_12383, RNA815_747.1}
3.	MligTC455_47356	1519	31.65	Mlig455_018207	Neo: - Age: Down-Up-Up, logFC(26M/2M)=0.601 Region-enriched R7: 1.519/0.03644	RCN1	3.587	-	0.766	0.915	0.933	0.973	-	Mlig455_018207 {REF} {Length: 2295} {TRANSSPLICED} {Pfam: EF hand [PF00036.34, score=68.7]; EF-hand domain pair [PF13499.8, score=60.6]; EF-hand domain [PF13405.8, score=45.6]; EF hand [PF13202.8, score=45.4]; Secreted protein acidic and rich in cysteine Ca binding region [PF10591.11, score=29.6]; EF-hand domain pair [PF13833.8, score=25.8]} {Human: ENSG00000049449, RCN1, reticulocalbin 1, [Score=168, Expect=4e-49]; ENSG00000142552, RCN3, reticulocalbin 3, [Score=167, Expect=9e-49]; ENSG00000128595, CALU, calumenin, [Score=166, Expect=3e-48]} {Mouse: ENSMUSG00000019539, Rcn3, reticulocalbin 3, EF-hand calcium binding domain, [Score=167, Expect=6e-49]; ENSMUSG00000005973, Rcn1, reticulocalbin 1, [Score=167, Expect=1e-48]; ENSMUSG00000029767, Calu, calumenin, [Score=166, Expect=2e-48]} {Dmel: FBgn0025682, scf, supercoiling factor, [Score=169, Expect=9e-50]} {Celegans: WBGene00019760, calu-1, CALUmenin (Calcium-binding protein) homolog; Calumenin-like protein, [Score=165, Expect=2e-48]} {Smed: dd_Smed_v6_1417_0_1, dd_Smed_v6_1417_0_1, [Score=182, Expect=3e-55]} {RNA1509_12383, RNA1509_43918, RNA1509_5096} {RNA1310_2693.1, RNA1509_43918, RNA1509_5096} {RNA1509_43918, RNA1509_5096, RNA815_747.1}
4.	MligTC455_25792	1420	29.58	Mlig455_016342, Mlig455_020876, Mlig455_036482, Mlig455_060659, Mlig455_068395	Neo: - Age: - Region-enriched R7: 1.712/0.01745		2.491	0.822	-	0.718	0.951	-	-	Mlig455_016342 {REF} {Length: 850} {RNA1509_22707} {RNA1310_33596.1} {RNA815_24119.1} Mlig455_020876 {REF} {Length: 1066} {RNA1509_22707} {RNA1310_33252.1} {RNA815_24119.1} Mlig455_036482 {REF} {Length: 786} {RNA1509_22707} {RNA1310_15800} {RNA815_24119.1} Mlig455_060659 {REF} {Length: 1236} {RNA1509_22707} {RNA1310_33252.1} {RNA815_24119.1} Mlig455_068395 {REF} {Length: 354} {NoTransDecoderORF} {RNA1509_22707} {RNA1310_90313} {RNA815_24119.1}
5.	MligTC455_14375	163	3.4	Mlig455_056945	Neo: - Age: -		0.96	0.960	-	-	-	-	-	Mlig455_056945 {REF} {Length: 1764} {Pfam: Glycosyltransferase sugar-binding region containing DXD motif [PF04488.17, score=49.6]} {Smed: dd_Smed_v6_32358_0_1, dd_Smed_v6_32358_0_1, [Score=94.4, Expect=4e-22]} {RNA1509_48719} {RNA1310_16266.1} {RNA815_10544.2}
6.	MligTC455_40223	172	3.59	Mlig455_016264	Neo: - Age: - Region-enriched R8: 3.704/0.01076	CHRNA10	0.954	0.954	-	-	-	-	-	Mlig455_016264 {REF} {Length: 4782} {Pfam: Neurotransmitter-gated ion-channel ligand binding domain [PF02931.25, score=169.5]; Neurotransmitter-gated ion-channel transmembrane region [PF02932.18, score=109.0]} {Human: ENSG00000129749, CHRNA10, cholinergic receptor nicotinic alpha 10 subunit, [Score=230, Expect=2e-68]; ENSG00000147432, CHRNB3, cholinergic receptor nicotinic beta 3 subunit, [Score=225, Expect=1e-66]} {Mouse: ENSMUSG00000031492, Chrnb3, cholinergic receptor, nicotinic, beta polypeptide 3, [Score=233, Expect=9e-70]} {Dmel: FBgn0032151, nAChRalpha6, nicotinic Acetylcholine Receptor alpha6, [Score=236, Expect=2e-70]} {Celegans: WBGene00000060, acr-21, AcetylCholine Receptor, [Score=215, Expect=6e-63]} {Smed: dd_Smed_v6_31300_0_1, dd_Smed_v6_31300_0_1, [Score=280, Expect=9e-87]} {RNA1509_35668} {RNA1310_11720.1} {RNA815_6827}
7.	MligTC455_52348	196	4.08	Mlig455_050601	Neo: - Age: logFC(26M/2M)=-0.400		0.954	-	-	-	0.954	-	-	Mlig455_050601 {REF} {Length: 3282} {Pfam: Spt20 family [PF12090.10, score=19.8]} {RNA1509_7271} {RNA1310_26412} {RNA815_23572}
8.	MligTC455_04420	209	4.36	Mlig455_005696	Neo: - Age: - Region-enriched R7: 3.482/0.00030 Region-enriched R8: 3.068/0.04709 Region-enriched R3: 2.252/0.02328		0.952	0.952	-	-	-	-	-	Mlig455_005696 {REF} {Length: 2113} {Pfam: Major Facilitator Superfamily [PF07690.18, score=68.2]; PUCC protein [PF03209.17, score=38.1]; MFS/sugar transport protein [PF13347.8, score=25.9]; MFS_1 like family [PF12832.9, score=24.5]} {Smed: dd_Smed_v6_8550_0_1, dd_Smed_v6_8550_0_1, [Score=388, Expect=2e-131]} {RNA1509_18256} {RNA1310_12968} {RNA815_5192}
9.	MligTC455_46216	1117	23.28	Mlig455_057440	Neo: - Age: - Region-enriched R7: 2.350/0.00017 Region-enriched R8: 2.312/0.00270	RBPMS2	0.952	0.952	-	-	-	-	-	Mlig455_057440 {REF} {Length: 4543} {TRANSSPLICED} {Pfam: RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) [PF00076.24, score=53.4]} {Human: ENSG00000166831, RBPMS2, RNA binding protein, mRNA processing factor 2, [RH, Score=128, Expect=2e-35]} {Mouse: ENSMUSG00000031586, Rbpms, RNA binding protein gene with multiple splicing, [RH, Score=125, Expect=3e-35]} {Dmel: FBgn0263995, cpo, couch potato, [Score=164, Expect=7e-46]} {Celegans: WBGene00003172, mec-8, Mec-8 protein, [Score=124, Expect=4e-33]} {Smed: dd_Smed_v6_4296_0_4, dd_Smed_v6_4296_0_4, [Score=150, Expect=3e-43]} {RNA1509_30119} {RNA1310_16586.1} {RNA815_23894}

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