Data search
Results for MligTC455_47467
| Cluster | Total UMI counts | Global CPM | Transcripts | Categories | Human homolog | Annotation |
|---|---|---|---|---|---|---|
| MligTC455_47467 | 210 | 4.38 | Mlig455_005092 | Neo: Irradiation Age: - |
Mlig455_005092 {REF} {Length: 4355} {TRANSSPLICED} {RNA1509_20827, RNA1509_36445, RNA1509_49467} {RNA1310_3947, RNA1509_20827, RNA1509_49467} {RNA1509_20827, RNA1509_49467, RNA815_1458} |
Cumulative graph for MligTC455_47467
Region-enriched expression
| Region | logFC | logCPM | Pvalue | FDR | Specificity |
|---|---|---|---|---|---|
| RegionR1 | -1.897 | 2.756 | 0.41554 | 1.00000 | |
| RegionR2 | -0.745 | 2.756 | 0.38333 | 0.77821 | |
| RegionR3 | 0.08 | 2.756 | 0.88575 | 1.00000 | |
| RegionR4 | 1.02 | 2.756 | 0.14828 | 0.39680 | |
| RegionR5 | 0.953 | 2.756 | 0.06034 | 0.21409 | |
| RegionR6 | -0.26 | 2.756 | 0.71796 | 1.00000 | |
| RegionR7 | -0.374 | 2.756 | 0.67821 | 1.00000 | |
| RegionR8 | 1.222 | 2.756 | 0.11062 | 0.61761 |
Regeneration-enriched expression
| Region | logFC | logCPM | PValue | FDR | Specificity |
|---|---|---|---|---|---|
| RegenerationR1 | -3.66 | 2.756 | 0.59645 | 1.00000 | |
| RegenerationR2 | 0.29 | 2.756 | 0.61978 | 0.92329 | |
| RegenerationR3 | -0.204 | 2.756 | 0.74191 | 0.96149 | |
| RegenerationR4 | -0.286 | 2.756 | 0.65578 | 0.93574 | |
| RegenerationR5 | 0.231 | 2.756 | 0.65453 | 0.93389 | |
| RegenerationR6 | 0.909 | 2.756 | 0.15726 | 0.48503 | |
| RegenerationBL | -0.466 | 2.756 | 0.58509 | 0.93631 | |
| RegenerationTP | -0.611 | 2.756 | 0.46769 | 0.87913 |
Genes with expression patterns similar to MligTC455_47467
| Nr. | Cluster | Total UMI counts | Global CPM | Transcripts | Categories | Human homolog | Σ Spearman correlations | Int1 | Int2 | Int3 | Reg1 | Reg2 | Reg3 | Annotation |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1. | MligTC455_47467 | 210 | 4.38 | Mlig455_005092 | Neo: Irradiation Age: - |
6 | 1.000 | 1.000 | 1.000 | 1.000 | 1.000 | 1.000 | Mlig455_005092 {REF} {Length: 4355} {TRANSSPLICED} {RNA1509_20827, RNA1509_36445, RNA1509_49467} {RNA1310_3947, RNA1509_20827, RNA1509_49467} {RNA1509_20827, RNA1509_49467, RNA815_1458} | |
| 2. | MligTC455_23793 | 99 | 2.07 | Mlig455_033726 | Neo: - Age: - |
CDK6 | 0.967 | - | - | - | - | - | 0.967 | Mlig455_033726 {REF} {Length: 2878} {TRANSSPLICED} {Pfam: Protein kinase domain [PF00069.27, score=158.8]; Protein tyrosine and serine/threonine kinase [PF07714.19, score=91.8]} {Human: ENSG00000105810, CDK6, cyclin dependent kinase 6, [Score=140, Expect=3e-37]; ENSG00000135446, CDK4, cyclin dependent kinase 4, [Score=138, Expect=9e-37]} {Mouse: ENSMUSG00000006728, Cdk4, cyclin-dependent kinase 4, [Score=149, Expect=1e-41]} {Dmel: FBgn0016131, Cdk4, Cyclin-dependent kinase 4, [Score=137, Expect=2e-36]} {Celegans: WBGene00000405, cdk-1, Cyclin-dependent kinase 1, [Score=120, Expect=1e-30]} {Smed: dd_Smed_v6_6179_0_5, dd_Smed_v6_6179_0_5, [Score=135, Expect=3e-36]} {RNA1509_24860} {RNA1310_17562} {RNA815_8098} |
| 3. | MligTC455_24506 | 573 | 11.95 | Mlig455_003680 | Neo: - Age: - |
NR1I2 | 0.964 | - | - | - | - | - | 0.964 | Mlig455_003680 {REF} {Length: 3889} {TRANSSPLICED} {Pfam: Zinc finger, C4 type (two domains) [PF00105.20, score=76.0]} {Human: ENSG00000144852, NR1I2, nuclear receptor subfamily 1 group I member 2, [Score=84.0, Expect=1e-16]} {Mouse: ENSMUSG00000022809, Nr1i2, nuclear receptor subfamily 1, group I, member 2, [Score=80.9, Expect=8e-16]; ENSMUSG00000002393, Nr2f6, nuclear receptor subfamily 2, group F, member 6, [Score=79.7, Expect=1e-15]; ENSMUSG00000024955, Esrra, estrogen related receptor, alpha, [Score=77.4, Expect=1e-14]; ENSMUSG00000022479, Vdr, vitamin D (1,25-dihydroxyvitamin D3) receptor, [Score=77.4, Expect=1e-14]} {Dmel: FBgn0015240, Hr96, Hormone receptor-like in 96, [Score=75.9, Expect=5e-14]} {Celegans: WBGene00000908, daf-12, Nuclear hormone receptor family member daf-12, [Score=94.4, Expect=5e-20]} {Smed: dd_Smed_v6_5200_0_1, dd_Smed_v6_5200_0_1, [Score=106, Expect=2e-24]} {RNA1509_19887, RNA1509_4070} {RNA1310_895.1, RNA1509_19887} {RNA1509_19887, RNA815_1055} |
| 4. | MligTC455_53329 | 299 | 6.23 | Mlig455_028603 | Neo: - Age: - Region-enriched R5: 3.183/0.00002 |
ST5 | 0.956 | - | - | - | - | - | 0.956 | Mlig455_028603 {REF} {Length: 7086} {Pfam: DENN (AEX-3) domain [PF02141.23, score=131.7]; uDENN domain [PF03456.20, score=38.2]} {Human: ENSG00000166444, ST5, suppression of tumorigenicity 5, [RH, Score=213, Expect=3e-56]} {Mouse: ENSMUSG00000031024, St5, suppression of tumorigenicity 5, [RH, Score=212, Expect=7e-56]} {Dmel: FBgn0027561, CG18659, [Score=90.1, Expect=5e-18]} {Celegans: WBGene00003477, mtm-5, Myotubularin-related protein 5, [Score=72.8, Expect=1e-12]} {Smed: dd_Smed_v6_7244_0_2, dd_Smed_v6_7244_0_2, [Score=78.2, Expect=2e-14]} {RNA1509_21610} {RNA1310_5403.1} {RNA815_496.1} |
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