Data search
Results for MligTC455_53329
| Cluster | Total UMI counts | Global CPM | Transcripts | Categories | Human homolog | Annotation |
|---|---|---|---|---|---|---|
| MligTC455_53329 | 299 | 6.23 | Mlig455_028603 | Neo: - Age: - Region-enriched R5: 3.183/0.00002 |
ST5 | Mlig455_028603 {REF} {Length: 7086} {Pfam: DENN (AEX-3) domain [PF02141.23, score=131.7]; uDENN domain [PF03456.20, score=38.2]} {Human: ENSG00000166444, ST5, suppression of tumorigenicity 5, [RH, Score=213, Expect=3e-56]} {Mouse: ENSMUSG00000031024, St5, suppression of tumorigenicity 5, [RH, Score=212, Expect=7e-56]} {Dmel: FBgn0027561, CG18659, [Score=90.1, Expect=5e-18]} {Celegans: WBGene00003477, mtm-5, Myotubularin-related protein 5, [Score=72.8, Expect=1e-12]} {Smed: dd_Smed_v6_7244_0_2, dd_Smed_v6_7244_0_2, [Score=78.2, Expect=2e-14]} {RNA1509_21610} {RNA1310_5403.1} {RNA815_496.1} |
Cumulative graph for MligTC455_53329
Region-enriched expression
| Region | logFC | logCPM | Pvalue | FDR | Specificity |
|---|---|---|---|---|---|
| RegionR1 | -4.701 | 3.175 | 0.99956 | 1.00000 | |
| RegionR2 | 1.69 | 3.175 | 0.11336 | 0.41630 | |
| RegionR3 | 2.086 | 3.175 | 0.01772 | 0.21965 | |
| RegionR4 | 1.415 | 3.175 | 0.16660 | 0.42821 | |
| RegionR5 | 3.183 | 3.175 | 0.00000 | 0.00002 | |
| RegionR6 | 1.382 | 3.175 | 0.17757 | 0.73991 | |
| RegionR7 | -0.503 | 3.175 | 0.87209 | 1.00000 | |
| RegionR8 | -4.551 | 3.175 | 0.99993 | 1.00000 |
Regeneration-enriched expression
| Region | logFC | logCPM | PValue | FDR | Specificity |
|---|---|---|---|---|---|
| RegenerationR1 | 7.029 | 3.175 | 0.06722 | 0.74503 | |
| RegenerationR2 | 0.007 | 3.175 | 0.98681 | 1.00000 | |
| RegenerationR3 | 0.065 | 3.175 | 0.90184 | 1.00000 | |
| RegenerationR4 | 0.947 | 3.175 | 0.06456 | 0.40573 | |
| RegenerationR5 | -0.234 | 3.175 | 0.55561 | 0.88873 | |
| RegenerationR6 | 0.444 | 3.175 | 0.42801 | 0.75693 | |
| RegenerationBL | 3.141 | 3.175 | 0.00701 | 0.08141 | |
| RegenerationTP | 4.101 | 3.175 | 0.01013 | 0.17103 |
Genes with expression patterns similar to MligTC455_53329
| Nr. | Cluster | Total UMI counts | Global CPM | Transcripts | Categories | Human homolog | Σ Spearman correlations | Int1 | Int2 | Int3 | Reg1 | Reg2 | Reg3 | Annotation |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1. | MligTC455_53329 | 299 | 6.23 | Mlig455_028603 | Neo: - Age: - Region-enriched R5: 3.183/0.00002 |
ST5 | 6 | 1.000 | 1.000 | 1.000 | 1.000 | 1.000 | 1.000 | Mlig455_028603 {REF} {Length: 7086} {Pfam: DENN (AEX-3) domain [PF02141.23, score=131.7]; uDENN domain [PF03456.20, score=38.2]} {Human: ENSG00000166444, ST5, suppression of tumorigenicity 5, [RH, Score=213, Expect=3e-56]} {Mouse: ENSMUSG00000031024, St5, suppression of tumorigenicity 5, [RH, Score=212, Expect=7e-56]} {Dmel: FBgn0027561, CG18659, [Score=90.1, Expect=5e-18]} {Celegans: WBGene00003477, mtm-5, Myotubularin-related protein 5, [Score=72.8, Expect=1e-12]} {Smed: dd_Smed_v6_7244_0_2, dd_Smed_v6_7244_0_2, [Score=78.2, Expect=2e-14]} {RNA1509_21610} {RNA1310_5403.1} {RNA815_496.1} |
| 2. | MligTC455_53328 | 881 | 18.35 | Mlig455_028586, Mlig455_056916 | Neo: Irradiation Age: Down-Up-Up, logFC(26M/2M)=0.648 Region-enriched R5: 2.442/0.00005 |
VARS2 | 4.122 | - | 0.793 | 0.745 | 0.773 | 0.861 | 0.950 | Mlig455_028586 {REF} {Length: 2862} {TRANSSPLICED} {Pfam: tRNA synthetases class I (I, L, M and V) [PF00133.24, score=493.4]; tRNA synthetases class I (M) [PF09334.13, score=54.0]; Anticodon-binding domain of tRNA ligase [PF08264.15, score=44.5]} {Human: ENSG00000236178, VARS2, valyl-tRNA synthetase 2, mitochondrial, [Score=577, Expect=0.0]; ENSG00000223494, VARS2, valyl-tRNA synthetase 2, mitochondrial, [Score=576, Expect=0.0]; ENSG00000285224, VARS2, valyl-tRNA synthetase 2, mitochondrial, [Score=576, Expect=0.0]; ENSG00000137411, VARS2, valyl-tRNA synthetase 2, mitochondrial, [Score=576, Expect=0.0]; ENSG00000285089, VARS2, valyl-tRNA synthetase 2, mitochondrial, [Score=576, Expect=0.0]; ENSG00000206476, VARS2, valyl-tRNA synthetase 2, mitochondrial, [Score=575, Expect=0.0]; ENSG00000234032, VARS2, valyl-tRNA synthetase 2, mitochondrial, [Score=575, Expect=0.0]; ENSG00000285213, VARS2, valyl-tRNA synthetase 2, mitochondrial, [Score=575, Expect=0.0]; ENSG00000230985, VARS2, valyl-tRNA synthetase 2, mitochondrial, [Score=575, Expect=0.0]; ENSG00000285515, VARS2, valyl-tRNA synthetase 2, mitochondrial, [Score=575, Expect=0.0]; ENSG00000285192, VARS2, valyl-tRNA synthetase 2, mitochondrial, [Score=574, Expect=0.0]; ENSG00000231945, VARS, valyl-tRNA synthetase, [Score=560, Expect=0.0]; ENSG00000204394, VARS, valyl-tRNA synthetase, [Score=558, Expect=0.0]; ENSG00000224264, VARS, valyl-tRNA synthetase, [Score=558, Expect=0.0]; ENSG00000226589, VARS, valyl-tRNA synthetase, [Score=558, Expect=0.0]; ENSG00000096171, VARS, valyl-tRNA synthetase, [Score=558, Expect=0.0]; ENSG00000231116, VARS, valyl-tRNA synthetase, [Score=558, Expect=0.0]} {Mouse: ENSMUSG00000038838, Vars2, valyl-tRNA synthetase 2, mitochondrial, [Score=578, Expect=0.0]; ENSMUSG00000007029, Vars, valyl-tRNA synthetase, [Score=561, Expect=0.0]} {Dmel: FBgn0027079, ValRS, Valyl-tRNA synthetase, [Score=589, Expect=0.0]} {Celegans: WBGene00006936, glp-4, Valine--tRNA ligase, [Score=588, Expect=0.0]} {Smed: dd_Smed_v6_6873_0_1, dd_Smed_v6_6873_0_1, [Score=541, Expect=3e-177]} {RNA1509_32017} {RNA1310_2395.1} {RNA815_496.1} Mlig455_056916 {REF} {Length: 4706} {Pfam: tRNA synthetases class I (I, L, M and V) [PF00133.24, score=368.3]; tRNA synthetases class I (M) [PF09334.13, score=27.3]; Anticodon-binding domain of tRNA ligase [PF08264.15, score=18.7]} {Human: ENSG00000236178, VARS2, valyl-tRNA synthetase 2, mitochondrial, [Score=450, Expect=2e-145]; ENSG00000285089, VARS2, valyl-tRNA synthetase 2, mitochondrial, [Score=450, Expect=5e-145]; ENSG00000285224, VARS2, valyl-tRNA synthetase 2, mitochondrial, [Score=450, Expect=6e-145]; ENSG00000137411, VARS2, valyl-tRNA synthetase 2, mitochondrial, [Score=450, Expect=5e-145]; ENSG00000285515, VARS2, valyl-tRNA synthetase 2, mitochondrial, [Score=449, Expect=8e-145]; ENSG00000223494, VARS2, valyl-tRNA synthetase 2, mitochondrial, [Score=449, Expect=4e-145]; ENSG00000285213, VARS2, valyl-tRNA synthetase 2, mitochondrial, [Score=449, Expect=8e-145]; ENSG00000230985, VARS2, valyl-tRNA synthetase 2, mitochondrial, [Score=449, Expect=3e-145]; ENSG00000234032, VARS2, valyl-tRNA synthetase 2, mitochondrial, [Score=449, Expect=5e-145]; ENSG00000285192, VARS2, valyl-tRNA synthetase 2, mitochondrial, [Score=449, Expect=7e-145]; ENSG00000206476, VARS2, valyl-tRNA synthetase 2, mitochondrial, [Score=449, Expect=5e-145]} {Mouse: ENSMUSG00000038838, Vars2, valyl-tRNA synthetase 2, mitochondrial, [Score=453, Expect=1e-146]} {Dmel: FBgn0027079, ValRS, Valyl-tRNA synthetase, [Score=464, Expect=3e-151]} {Celegans: WBGene00006936, glp-4, Valine--tRNA ligase, [Score=459, Expect=3e-149]} {Smed: dd_Smed_v6_6873_0_1, dd_Smed_v6_6873_0_1, [Score=416, Expect=7e-133]} {RNA1509_32017} {RNA1310_2395.1} {RNA815_496.1} |
| 3. | MligTC455_42888 | 324 | 6.74 | Mlig455_023771 | Neo: Irradiation Age: - Region-enriched R5: 1.824/0.00004 |
PTPMT1 | 3.297 | 0.739 | - | 0.834 | - | 0.773 | 0.951 | Mlig455_023771 {REF} {Length: 883} {TRANSSPLICED} {Pfam: Dual specificity phosphatase, catalytic domain [PF00782.22, score=55.4]; Protein-tyrosine phosphatase [PF00102.29, score=21.0]} {Human: ENSG00000110536, PTPMT1, protein tyrosine phosphatase, mitochondrial 1, [RH, Score=101, Expect=1e-26]; ENSG00000285206, PTPMT1, protein tyrosine phosphatase, mitochondrial 1, [RH, Score=101, Expect=1e-26]} {Mouse: ENSMUSG00000110860, Ptpmt1, protein tyrosine phosphatase, mitochondrial 1, [RH, Score=95.9, Expect=5e-24]} {Dmel: FBgn0039111, PTPMT1, Protein tyrosine phosphatase, mitochondrial 1, [RH, Score=114, Expect=5e-32]} {Celegans: WBGene00009207, F28C6.8, [RH, Score=103, Expect=8e-28]} {Smed: dd_Smed_v6_6276_0_2, dd_Smed_v6_6276_0_2, [RH, Score=99.4, Expect=2e-26]} {RNA1509_35905, RNA1509_45090} {RNA1310_38858, RNA1509_35905, RNA1509_45090} {RNA1509_35905, RNA1509_45090, RNA815_25279} |
| 4. | MligTC455_41782 | 372 | 7.76 | Mlig455_039685, Mlig455_039741 | Neo: - Age: Down-Up-Up |
ANKRD29 | 1.794 | - | - | - | - | 0.823 | 0.971 | Mlig455_039685 {REF} {Length: 1909} {TRANSSPLICED} {Pfam: Ankyrin repeats (3 copies) [PF12796.9, score=100.5]; Ankyrin repeat [PF00023.32, score=84.2]; Ankyrin repeats (many copies) [PF13857.8, score=82.1]; Ankyrin repeat [PF13606.8, score=67.7]; Ankyrin repeats (many copies) [PF13637.8, score=66.2]} {Human: ENSG00000154065, ANKRD29, ankyrin repeat domain 29, [Score=112, Expect=2e-28]} {Mouse: ENSMUSG00000057766, Ankrd29, ankyrin repeat domain 29, [Score=107, Expect=7e-27]} {Dmel: FBgn0031473, CG3104, [Score=127, Expect=4e-34]} {Celegans: WBGene00011240, R11A8.7, Ankyrin repeat and KH domain-containing protein R11A8.7, [Score=96.7, Expect=8e-22]} {Smed: dd_Smed_v6_6779_0_1, dd_Smed_v6_6779_0_1, [Score=103, Expect=4e-24]} {RNA1509_42977} {RNA1310_20834} {RNA815_40833} Mlig455_039741 {REF} {Length: 2069} {TRANSSPLICED} {Pfam: Ankyrin repeats (3 copies) [PF12796.9, score=130.1]; Ankyrin repeats (many copies) [PF13857.8, score=97.5]; Ankyrin repeats (many copies) [PF13637.8, score=92.2]; Ankyrin repeat [PF00023.32, score=90.3]; Ankyrin repeat [PF13606.8, score=83.1]} {Human: ENSG00000154065, ANKRD29, ankyrin repeat domain 29, [Score=134, Expect=6e-36]} {Mouse: ENSMUSG00000057766, Ankrd29, ankyrin repeat domain 29, [Score=130, Expect=1e-34]} {Dmel: FBgn0031473, CG3104, [Score=146, Expect=8e-41]} {Celegans: WBGene00011240, R11A8.7, Ankyrin repeat and KH domain-containing protein R11A8.7, [Score=107, Expect=2e-25]} {Smed: dd_Smed_v6_9936_0_1, dd_Smed_v6_9936_0_1, [Score=131, Expect=5e-34]} {RNA1509_42977} {RNA1310_21408, RNA1509_42977} {RNA1509_42977, RNA815_40833} |
| 5. | MligTC455_52496 | 28 | 0.57 | Mlig455_013244 | Neo: - Age: - |
CACFD1 | 0.981 | - | - | - | - | - | 0.981 | Mlig455_013244 {REF} {Length: 5690} {Pfam: Uncharacterized conserved protein CG6151-P [PF10233.11, score=67.5]} {Human: ENSG00000160325, CACFD1, calcium channel flower domain containing 1, [Score=57.0, Expect=9e-10]; ENSG00000280479, CACFD1, calcium channel flower domain containing 1, [Score=57.0, Expect=9e-10]} {Mouse: ENSMUSG00000015488, Cacfd1, calcium channel flower domain containing 1, [Score=55.8, Expect=6e-10]} {RNA1509_42052} {RNA1310_29216} {RNA815_11121.1} |
| 6. | MligTC455_51030 | 415 | 8.66 | Mlig455_021019 | Neo: Germline Age: - |
RCC1 | 0.975 | - | - | - | - | - | 0.975 | Mlig455_021019 {REF} {Length: 2560} {TRANSSPLICED} {Pfam: Regulator of chromosome condensation (RCC1) repeat [PF00415.20, score=213.2]; Regulator of chromosome condensation (RCC1) repeat [PF13540.8, score=74.7]} {Human: ENSG00000180198, RCC1, regulator of chromosome condensation 1, [Score=324, Expect=6e-106]} {Mouse: ENSMUSG00000028896, Rcc1, regulator of chromosome condensation 1, [Score=328, Expect=1e-107]} {Dmel: FBgn0002638, Rcc1, Regulator of chromosome condensation 1, [Score=247, Expect=2e-75]} {Celegans: WBGene00004304, ran-3, Regulator of chromosome condensation, [RH, Score=150, Expect=3e-39]} {Smed: dd_Smed_v6_4136_0_1, dd_Smed_v6_4136_0_1, [Score=270, Expect=3e-83]} {RNA1509_23063, RNA1509_25016, RNA1509_25882, RNA1509_39295} {RNA1310_14393, RNA1509_23063, RNA1509_25016, RNA1509_25882, RNA1509_39295} {RNA1509_23063, RNA1509_25016, RNA1509_25882, RNA1509_39295, RNA815_11941} |
| 7. | MligTC455_24506 | 573 | 11.95 | Mlig455_003680 | Neo: - Age: - |
NR1I2 | 0.966 | - | - | - | - | - | 0.966 | Mlig455_003680 {REF} {Length: 3889} {TRANSSPLICED} {Pfam: Zinc finger, C4 type (two domains) [PF00105.20, score=76.0]} {Human: ENSG00000144852, NR1I2, nuclear receptor subfamily 1 group I member 2, [Score=84.0, Expect=1e-16]} {Mouse: ENSMUSG00000022809, Nr1i2, nuclear receptor subfamily 1, group I, member 2, [Score=80.9, Expect=8e-16]; ENSMUSG00000002393, Nr2f6, nuclear receptor subfamily 2, group F, member 6, [Score=79.7, Expect=1e-15]; ENSMUSG00000024955, Esrra, estrogen related receptor, alpha, [Score=77.4, Expect=1e-14]; ENSMUSG00000022479, Vdr, vitamin D (1,25-dihydroxyvitamin D3) receptor, [Score=77.4, Expect=1e-14]} {Dmel: FBgn0015240, Hr96, Hormone receptor-like in 96, [Score=75.9, Expect=5e-14]} {Celegans: WBGene00000908, daf-12, Nuclear hormone receptor family member daf-12, [Score=94.4, Expect=5e-20]} {Smed: dd_Smed_v6_5200_0_1, dd_Smed_v6_5200_0_1, [Score=106, Expect=2e-24]} {RNA1509_19887, RNA1509_4070} {RNA1310_895.1, RNA1509_19887} {RNA1509_19887, RNA815_1055} |
| 8. | MligTC455_19635 | 282 | 5.87 | Mlig455_015139 | Neo: - Age: - Region-enriched R5: 1.680/0.00004 |
0.96 | - | - | - | - | - | 0.960 | Mlig455_015139 {REF} {Length: 1530} {TRANSSPLICED} {RNA1509_26653} {RNA1310_16656.1} {RNA815_20935.2} | |
| 9. | MligTC455_35677 | 126 | 2.64 | Mlig455_023817 | Neo: - Age: - |
0.956 | - | - | - | - | - | 0.956 | Mlig455_023817 {REF} {Length: 2975} {TRANSSPLICED} {RNA1509_23775} {RNA1310_16952} {RNA815_5748.3} | |
| 10. | MligTC455_47467 | 210 | 4.38 | Mlig455_005092 | Neo: Irradiation Age: - |
0.956 | - | - | - | - | - | 0.956 | Mlig455_005092 {REF} {Length: 4355} {TRANSSPLICED} {RNA1509_20827, RNA1509_36445, RNA1509_49467} {RNA1310_3947, RNA1509_20827, RNA1509_49467} {RNA1509_20827, RNA1509_49467, RNA815_1458} | |
| 11. | MligTC455_44358 | 43 | 0.9 | Mlig455_070427 | Neo: Germline Age: - |
0.951 | - | - | - | - | 0.951 | - | Mlig455_070427 {REF} {Length: 1483} {TRANSSPLICED} {RNA1509_8535} {RNA1310_21622} {RNA815_8801} | |
| 12. | MligTC455_42531 | 336 | 7 | Mlig455_030594 | Neo: Int S/G2/M Age: Down-Up-Up |
ABT1 | 0.95 | - | - | - | - | - | 0.950 | Mlig455_030594 {REF} {Length: 1307} {TRANSSPLICED} {Pfam: RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) [PF00076.24, score=19.4]} {Human: ENSG00000146109, ABT1, activator of basal transcription 1, [RH, Score=99.8, Expect=1e-24]} {Mouse: ENSMUSG00000036376, Abt1, activator of basal transcription 1, [RH, Score=102, Expect=8e-26]} {Dmel: FBgn0052708, CG32708, [RH, Score=97.4, Expect=2e-24]} {Celegans: WBGene00019005, F57B10.8, [RH, Score=87.4, Expect=2e-20]} {Smed: dd_Smed_v6_1929_0_1, dd_Smed_v6_1929_0_1, [RH, Score=101, Expect=2e-26]} {RNA1509_15723} {RNA1310_48173.1} {RNA815_22694} |