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Results for MligTC455_47475

Cluster Total UMI counts Global CPM Transcripts Categories Human homolog Annotation
MligTC455_47475 690 14.37 Mlig455_007958, Mlig455_008101, Mlig455_015589

Neo: Int S/G2/M

Age: -

POLR2G

Mlig455_007958 {REF} {Length: 2004} {Pfam: S1 RNA binding domain [PF00575.25, score=55.7]; SHS2 domain found in N terminus of Rpb7p/Rpc25p/MJ0397 [PF03876.19, score=44.0]} {Human: ENSG00000168002, POLR2G, RNA polymerase II subunit G, [RH, Score=267, Expect=2e-92]} {Mouse: ENSMUSG00000071662, Polr2g, polymerase (RNA) II (DNA directed) polypeptide G, [RH, Score=267, Expect=1e-92]} {Dmel: FBgn0051155, Rpb7, [RH, Score=249, Expect=1e-85]} {Celegans: WBGene00021845, rpb-7, RNA Polymerase II (B) subunit, [RH, Score=248, Expect=8e-85]} {Smed: dd_Smed_v6_6411_0_1, dd_Smed_v6_6411_0_1, [RH, Score=210, Expect=3e-70]} {RNA1509_27027} {RNA1310_22082} {RNA815_7998}

Mlig455_008101 {REF} {Length: 2059} {Pfam: S1 RNA binding domain [PF00575.25, score=55.7]; SHS2 domain found in N terminus of Rpb7p/Rpc25p/MJ0397 [PF03876.19, score=44.0]} {Human: ENSG00000168002, POLR2G, RNA polymerase II subunit G, [RH, Score=267, Expect=2e-92]} {Mouse: ENSMUSG00000071662, Polr2g, polymerase (RNA) II (DNA directed) polypeptide G, [RH, Score=267, Expect=1e-92]} {Dmel: FBgn0051155, Rpb7, [RH, Score=249, Expect=1e-85]} {Celegans: WBGene00021845, rpb-7, RNA Polymerase II (B) subunit, [RH, Score=248, Expect=8e-85]} {Smed: dd_Smed_v6_6411_0_1, dd_Smed_v6_6411_0_1, [RH, Score=210, Expect=3e-70]} {RNA1509_27027} {RNA1310_22082, RNA1509_27027} {RNA1509_27027, RNA815_7998}

Mlig455_015589 {REF} {Length: 1966} {Pfam: S1 RNA binding domain [PF00575.25, score=55.7]; SHS2 domain found in N terminus of Rpb7p/Rpc25p/MJ0397 [PF03876.19, score=44.0]} {Human: ENSG00000168002, POLR2G, RNA polymerase II subunit G, [RH, Score=267, Expect=2e-92]} {Mouse: ENSMUSG00000071662, Polr2g, polymerase (RNA) II (DNA directed) polypeptide G, [RH, Score=267, Expect=1e-92]} {Dmel: FBgn0051155, Rpb7, [RH, Score=249, Expect=1e-85]} {Celegans: WBGene00021845, rpb-7, RNA Polymerase II (B) subunit, [RH, Score=248, Expect=8e-85]} {Smed: dd_Smed_v6_6411_0_1, dd_Smed_v6_6411_0_1, [RH, Score=210, Expect=3e-70]} {RNA1509_27027} {RNA1310_22082} {RNA815_7998}

Cumulative graph for MligTC455_47475

Region-enriched expression

Region logFC logCPM Pvalue FDR Specificity
RegionR1 -1.677 4.292 0.16178 0.78384
RegionR2 1.074 4.292 0.13194 0.45086
RegionR3 0.192 4.292 0.73904 1.00000
RegionR4 -1.04 4.292 0.12511 0.35657
RegionR5 0.933 4.292 0.03888 0.15632
RegionR6 0.157 4.292 0.76293 1.00000
RegionR7 -0.02 4.292 0.98033 1.00000
RegionR8 0.38 4.292 0.59952 1.00000

Regeneration-enriched expression

Region logFC logCPM PValue FDR Specificity
RegenerationR1 -4.337 4.292 0.45246 1.00000
RegenerationR2 -0.959 4.292 0.15653 0.59302
RegenerationR3 0.268 4.292 0.71538 0.95342
RegenerationR4 -0.127 4.292 0.87584 1.00000
RegenerationR5 -0.607 4.292 0.33784 0.75615
RegenerationR6 0.986 4.292 0.14395 0.46478
RegenerationBL 0.662 4.292 0.37591 0.74448
RegenerationTP 0.864 4.292 0.27962 0.72695


Genes with expression patterns similar to MligTC455_47475

Nr. Cluster Total UMI counts Global CPM Transcripts Categories Human homolog Σ Spearman correlations Int1 Int2 Int3 Reg1 Reg2 Reg3 Annotation
1. MligTC455_47475 690 14.37 Mlig455_007958, Mlig455_008101, Mlig455_015589

Neo: Int S/G2/M

Age: -

POLR2G 6 1.000 1.000 1.000 1.000 1.000 1.000

Mlig455_007958 {REF} {Length: 2004} {Pfam: S1 RNA binding domain [PF00575.25, score=55.7]; SHS2 domain found in N terminus of Rpb7p/Rpc25p/MJ0397 [PF03876.19, score=44.0]} {Human: ENSG00000168002, POLR2G, RNA polymerase II subunit G, [RH, Score=267, Expect=2e-92]} {Mouse: ENSMUSG00000071662, Polr2g, polymerase (RNA) II (DNA directed) polypeptide G, [RH, Score=267, Expect=1e-92]} {Dmel: FBgn0051155, Rpb7, [RH, Score=249, Expect=1e-85]} {Celegans: WBGene00021845, rpb-7, RNA Polymerase II (B) subunit, [RH, Score=248, Expect=8e-85]} {Smed: dd_Smed_v6_6411_0_1, dd_Smed_v6_6411_0_1, [RH, Score=210, Expect=3e-70]} {RNA1509_27027} {RNA1310_22082} {RNA815_7998}

Mlig455_008101 {REF} {Length: 2059} {Pfam: S1 RNA binding domain [PF00575.25, score=55.7]; SHS2 domain found in N terminus of Rpb7p/Rpc25p/MJ0397 [PF03876.19, score=44.0]} {Human: ENSG00000168002, POLR2G, RNA polymerase II subunit G, [RH, Score=267, Expect=2e-92]} {Mouse: ENSMUSG00000071662, Polr2g, polymerase (RNA) II (DNA directed) polypeptide G, [RH, Score=267, Expect=1e-92]} {Dmel: FBgn0051155, Rpb7, [RH, Score=249, Expect=1e-85]} {Celegans: WBGene00021845, rpb-7, RNA Polymerase II (B) subunit, [RH, Score=248, Expect=8e-85]} {Smed: dd_Smed_v6_6411_0_1, dd_Smed_v6_6411_0_1, [RH, Score=210, Expect=3e-70]} {RNA1509_27027} {RNA1310_22082, RNA1509_27027} {RNA1509_27027, RNA815_7998}

Mlig455_015589 {REF} {Length: 1966} {Pfam: S1 RNA binding domain [PF00575.25, score=55.7]; SHS2 domain found in N terminus of Rpb7p/Rpc25p/MJ0397 [PF03876.19, score=44.0]} {Human: ENSG00000168002, POLR2G, RNA polymerase II subunit G, [RH, Score=267, Expect=2e-92]} {Mouse: ENSMUSG00000071662, Polr2g, polymerase (RNA) II (DNA directed) polypeptide G, [RH, Score=267, Expect=1e-92]} {Dmel: FBgn0051155, Rpb7, [RH, Score=249, Expect=1e-85]} {Celegans: WBGene00021845, rpb-7, RNA Polymerase II (B) subunit, [RH, Score=248, Expect=8e-85]} {Smed: dd_Smed_v6_6411_0_1, dd_Smed_v6_6411_0_1, [RH, Score=210, Expect=3e-70]} {RNA1509_27027} {RNA1310_22082} {RNA815_7998}
2. MligTC455_40465 165 3.45 Mlig455_012477

Neo: Irradiation

Age: -

INTS6 0.959 - - - - - 0.959 Mlig455_012477 {REF} {Length: 4658} {TRANSSPLICED} {Pfam: von Willebrand factor type A domain [PF13519.8, score=61.6]} {Human: ENSG00000102786, INTS6, integrator complex subunit 6, [RH, Score=599, Expect=0.0]; ENSG00000165359, INTS6L, integrator complex subunit 6 like, [RH, Score=586, Expect=0.0]} {Mouse: ENSMUSG00000035161, Ints6, integrator complex subunit 6, [RH, Score=598, Expect=0.0]} {Dmel: FBgn0261383, IntS6, Integrator 6, [RH, Score=457, Expect=7e-143]} {Celegans: WBGene00000994, dic-1, DICE1 (Deleted In Cancer) homolog, [RH, Score=215, Expect=4e-58]} {Smed: dd_Smed_v6_11019_0_1, dd_Smed_v6_11019_0_1, [RH, Score=476, Expect=3e-155]} {RNA1509_16366} {RNA1310_4525} {RNA815_19797}
3. MligTC455_53384 379 7.9 Mlig455_016476

Neo: Irradiation

Age: -

Region-enriched R5: 1.852/0.00111

ZNF398 0.957 - - 0.957 - - - Mlig455_016476 {REF} {Length: 2622} {TRANSSPLICED} {Pfam: Zinc finger, C2H2 type [PF00096.28, score=34.7]; Zinc-finger double domain [PF13465.8, score=27.3]; C2H2-type zinc finger [PF13894.8, score=23.3]} {Human: ENSG00000197024, ZNF398, zinc finger protein 398, [Score=67.4, Expect=2e-11]; ENSG00000177125, ZBTB34, zinc finger and BTB domain containing 34, [Score=66.2, Expect=4e-11]; ENSG00000130856, ZNF236, zinc finger protein 236, [Score=65.1, Expect=2e-10]; ENSG00000160062, ZBTB8A, zinc finger and BTB domain containing 8A, [Score=64.3, Expect=2e-10]; ENSG00000170265, ZNF282, zinc finger protein 282, [Score=64.3, Expect=2e-10]; ENSG00000185278, ZBTB37, zinc finger and BTB domain containing 37, [Score=64.3, Expect=1e-10]} {Mouse: ENSMUSG00000062519, Zfp398, zinc finger protein 398, [Score=67.4, Expect=1e-11]; ENSMUSG00000068966, Zbtb34, zinc finger and BTB domain containing 34, [Score=66.2, Expect=3e-11]; ENSMUSG00000025821, Zfp282, zinc finger protein 282, [Score=64.7, Expect=1e-10]; ENSMUSG00000043467, Zbtb37, zinc finger and BTB domain containing 37, [Score=64.7, Expect=9e-11]; ENSMUSG00000041258, Zfp236, zinc finger protein 236, [Score=64.3, Expect=2e-10]} {Dmel: FBgn0261434, hkb, huckebein, [Score=69.7, Expect=6e-13]} {Celegans: WBGene00003033, lin-48, Putative zinc finger transcription factor, [Score=63.9, Expect=3e-11]} {Smed: dd_Smed_v6_15473_0_1, dd_Smed_v6_15473_0_1, [RH, Score=106, Expect=7e-26]} {RNA1509_16547} {RNA1310_10302, RNA1509_16547} {RNA1509_16547, RNA815_15237}
4. MligTC455_31745 269 5.6 Mlig455_020373

Neo: -

Age: -

0.954 - - - 0.954 - - Mlig455_020373 {REF} {Length: 890} {RNA1310_47339.1} {RNA815_12620.1}

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