M. lignano Tomo-Seq
Mlig455 transcriptome Search Regeneration Regions Sections Download

Data search


search
Exact
Search

Results for MligTC455_47502

Cluster Total UMI counts Global CPM Transcripts Categories Human homolog Annotation
MligTC455_47502 210 4.37 Mlig455_066363

Neo: -

Age: -

 CHD1L Mlig455_066363 {REF} {Length: 2510} {Pfam: Helicase conserved C-terminal domain [PF00271.33, score=61.2]; DNA ligase 3 BRCT domain [PF16759.7, score=30.5]; Class II histone deacetylase complex subunits 2 and 3 [PF11496.10, score=22.6]; ERCC3/RAD25/XPB C-terminal helicase [PF16203.7, score=19.6]} {Human: ENSG00000131778, CHD1L, chromodomain helicase DNA binding protein 1 like, [Score=431, Expect=3e-142]} {Mouse: ENSMUSG00000028089, Chd1l, chromodomain helicase DNA binding protein 1-like, [Score=426, Expect=8e-137]} {Dmel: FBgn0266557, kis, kismet, [Score=189, Expect=2e-49]} {Celegans: WBGene00010369, chd-1, Chromodomain and Helicase Domain protein, [Score=182, Expect=9e-48]} {Smed: dd_Smed_v6_17704_0_1, dd_Smed_v6_17704_0_1, [Score=349, Expect=5e-108]} {RNA1509_30176} {RNA1310_21086.1} {RNA815_6355}

Cumulative graph for MligTC455_47502

Region-enriched expression

Region logFC logCPM Pvalue FDR Specificity
RegionR1 -6.285 2.814 0.13724 0.74202
RegionR2 2.011 2.814 0.06248 0.30151
RegionR3 0.48 2.814 0.63352 1.00000
RegionR4 0.381 2.814 0.69175 0.98294
RegionR5 0.927 2.814 0.30971 0.64819
RegionR6 0.333 2.814 0.71783 1.00000
RegionR7 0.883 2.814 0.47674 1.00000
RegionR8 1.269 2.814 0.37149 1.00000

Regeneration-enriched expression

Region logFC logCPM PValue FDR Specificity
RegenerationR1 0.762 2.814 0.99989 1.00000
RegenerationR2 0.758 2.814 0.24058 0.68819
RegenerationR3 1.446 2.814 0.06814 0.43858
RegenerationR4 0.619 2.814 0.42696 0.82913
RegenerationR5 0.408 2.814 0.55943 0.89074
RegenerationR6 1.737 2.814 0.02321 0.18917
RegenerationBL 1.191 2.814 0.17411 0.49994
RegenerationTP -0.909 2.814 0.44895 0.86633


Genes with expression patterns similar to MligTC455_47502

Nr. Cluster Total UMI counts Global CPM Transcripts Categories Human homolog Σ Spearman correlations Int1 Int2 Int3 Reg1 Reg2 Reg3 Annotation
1. MligTC455_47502 210 4.37 Mlig455_066363

Neo: -

Age: -

 CHD1L 6 1.000 1.000 1.000 1.000 1.000 1.000 Mlig455_066363 {REF} {Length: 2510} {Pfam: Helicase conserved C-terminal domain [PF00271.33, score=61.2]; DNA ligase 3 BRCT domain [PF16759.7, score=30.5]; Class II histone deacetylase complex subunits 2 and 3 [PF11496.10, score=22.6]; ERCC3/RAD25/XPB C-terminal helicase [PF16203.7, score=19.6]} {Human: ENSG00000131778, CHD1L, chromodomain helicase DNA binding protein 1 like, [Score=431, Expect=3e-142]} {Mouse: ENSMUSG00000028089, Chd1l, chromodomain helicase DNA binding protein 1-like, [Score=426, Expect=8e-137]} {Dmel: FBgn0266557, kis, kismet, [Score=189, Expect=2e-49]} {Celegans: WBGene00010369, chd-1, Chromodomain and Helicase Domain protein, [Score=182, Expect=9e-48]} {Smed: dd_Smed_v6_17704_0_1, dd_Smed_v6_17704_0_1, [Score=349, Expect=5e-108]} {RNA1509_30176} {RNA1310_21086.1} {RNA815_6355}
2. MligTC455_50416 236 4.91 Mlig455_020155

Neo: -

Age: logFC(26M/2M)=-0.515

 ANK1 1.714 - - - 0.756 - 0.958 Mlig455_020155 {REF} {Length: 7072} {Pfam: Ankyrin repeats (3 copies) [PF12796.9, score=370.4]; Ankyrin repeat [PF00023.32, score=241.0]; Ankyrin repeat [PF13606.8, score=233.7]; Ankyrin repeats (many copies) [PF13637.8, score=228.4]; Ankyrin repeats (many copies) [PF13857.8, score=209.7]; Mab-21 protein [PF03281.16, score=35.8]} {Human: ENSG00000029534, ANK1, ankyrin 1, [Score=333, Expect=3e-92]} {Mouse: ENSMUSG00000031543, Ank1, ankyrin 1, erythroid, [Score=322, Expect=4e-89]} {Dmel: FBgn0261788, Ank2, Ankyrin 2, [Score=290, Expect=2e-78]} {Celegans: WBGene00006780, unc-44, AO66 ankyrin, [Score=288, Expect=5e-78]} {Smed: dd_Smed_v6_2072_0_29, dd_Smed_v6_2072_0_29, [Score=283, Expect=4e-80]} {RNA1509_34872} {RNA1310_938, RNA1509_34872} {RNA1509_34872, RNA815_1787.1}
3. MligTC455_33977 139 2.9 Mlig455_020667

Neo: -

Age: -

 GPATCH3 0.966 - - - - - 0.966 Mlig455_020667 {REF} {Length: 2485} {TRANSSPLICED} {Human: ENSG00000198746, GPATCH3, G-patch domain containing 3, [RH, Score=193, Expect=9e-55]} {Mouse: ENSMUSG00000028850, Gpatch3, G patch domain containing 3, [RH, Score=199, Expect=2e-57]} {Celegans: WBGene00019467, K07B1.7, [RH, Score=188, Expect=1e-53]} {Smed: dd_Smed_v6_10733_0_1, dd_Smed_v6_10733_0_1, [RH, Score=129, Expect=9e-33]} {RNA1509_39930} {RNA1310_28890.1} {RNA815_49191}
4. MligTC455_44045 161 3.36 Mlig455_064189

Neo: -

Age: -

 CCDC17 0.964 - - - - - 0.964 Mlig455_064189 {REF} {Length: 4760} {TRANSSPLICED} {Human: ENSG00000159588, CCDC17, coiled-coil domain containing 17, [RH, Score=109, Expect=8e-24]} {Mouse: ENSMUSG00000034035, Ccdc17, coiled-coil domain containing 17, [RH, Score=104, Expect=2e-22]} {Smed: dd_Smed_v6_14654_0_1, dd_Smed_v6_14654_0_1, [RH, Score=491, Expect=2e-150]} {RNA1509_21725, RNA1509_31781} {RNA1310_2813.2, RNA1509_21725} {RNA1509_21725, RNA815_3640}
5. MligTC455_52851 150 3.12 Mlig455_019167

Neo: -

Age: -

 IPP 0.963 - - - - - 0.963 Mlig455_019167 {REF} {Length: 4194} {Pfam: Kelch motif [PF13964.8, score=59.7]; BTB/POZ domain [PF00651.33, score=59.3]; Kelch motif [PF01344.27, score=43.5]; PB1 domain [PF00564.26, score=38.1]; BTB And C-terminal Kelch [PF07707.17, score=31.3]; Kelch motif [PF13854.8, score=29.1]; Galactose oxidase, central domain [PF13418.8, score=21.0]} {Human: ENSG00000197429, IPP, intracisternal A particle-promoted polypeptide, [Score=108, Expect=1e-23]} {Mouse: ENSMUSG00000028696, Ipp, IAP promoted placental gene, [Score=116, Expect=2e-26]} {Dmel: FBgn0034396, CG15097, [Score=101, Expect=1e-21]} {Celegans: WBGene00002184, kel-1, KELch-repeat containing protein; Kel-1 protein, [Score=94.0, Expect=2e-19]} {Smed: dd_Smed_v6_1751_0_1, dd_Smed_v6_1751_0_1, [Score=112, Expect=2e-25]} {RNA1509_34974} {RNA1310_11834, RNA1509_34974} {RNA1509_34974, RNA815_22708}
6. MligTC455_35283 351 7.32 Mlig455_008550

Neo: -

Age: -

 0.962 - - - - - 0.962 Mlig455_008550 {REF} {Length: 998} {NoTransDecoderORF} {RNA1310_50962}
7. MligTC455_39981 457 9.52 Mlig455_028079

Neo: Int S/G2/M

Age: -

 MRPL17 0.962 - - - - - 0.962 Mlig455_028079 {REF} {Length: 1342} {TRANSSPLICED} {Pfam: Ribosomal protein L17 [PF01196.21, score=29.7]} {Human: ENSG00000158042, MRPL17, mitochondrial ribosomal protein L17, [RH, Score=57.4, Expect=3e-10]} {Mouse: ENSMUSG00000030879, Mrpl17, mitochondrial ribosomal protein L17, [RH, Score=57.8, Expect=2e-10]} {Dmel: FBgn0035122, mRpL17, mitochondrial ribosomal protein L17, [RH, Score=67.0, Expect=4e-14]} {Smed: dd_Smed_v6_3289_0_1, dd_Smed_v6_3289_0_1, [RH, Score=105, Expect=1e-28]} {RNA1509_21955, RNA1509_25190} {RNA1310_25456, RNA1509_21955, RNA1509_25190} {RNA1509_21955, RNA1509_25190, RNA815_9956}
8. MligTC455_50891 492 10.25 Mlig455_062495

Neo: -

Age: Up-Down-Up, logFC(26M/2M)=0.898

Region-enriched R4: 1.209/0.04127

 0.961 - - - - - 0.961 Mlig455_062495 {REF} {Length: 25747} {TRANSSPLICED} {Mouse: ENSMUSG00000085925, Rtl1, retrotransposon Gaglike 1, [Score=62.4, Expect=2e-08]; ENSMUSG00000098639, Rtl1, retrotransposon Gaglike 1, [Score=62.4, Expect=2e-08]} {Dmel: FBgn0052656, Muc11A, Mucin 11A, [Score=162, Expect=5e-39]} {RNA1509_3715} {RNA1310_899} {RNA815_287}
9. MligTC455_29454 50 1.05 Mlig455_065107

Neo: -

Age: -

 CHRNA10 0.96 - - - - - 0.960 Mlig455_065107 {REF} {Length: 3864} {Pfam: Neurotransmitter-gated ion-channel ligand binding domain [PF02931.25, score=79.6]} {Human: ENSG00000129749, CHRNA10, cholinergic receptor nicotinic alpha 10 subunit, [Score=64.7, Expect=5e-11]; ENSG00000160716, CHRNB2, cholinergic receptor nicotinic beta 2 subunit, [Score=61.6, Expect=5e-10]} {Mouse: ENSMUSG00000032303, Chrna3, cholinergic receptor, nicotinic, alpha polypeptide 3, [Score=71.6, Expect=2e-13]} {Celegans: WBGene00000051, acr-12, AcetylCholine Receptor; Nicotinic acetylcholine receptor-like subunit ACR-12, [Score=56.2, Expect=1e-08]} {Smed: dd_Smed_v6_12146_0_1, dd_Smed_v6_12146_0_1, [Score=74.7, Expect=6e-15]} {RNA1509_57562} {RNA1310_27363} {RNA815_5685.1}
10. MligTC455_48560 57 1.18 Mlig455_046453

Neo: -

Age: -

Region-enriched R2: 5.673/0.03292

 0.959 - - - - - 0.959 Mlig455_046453 {REF} {Length: 1321} {TRANSSPLICED} {RNA1310_43065} {RNA815_11099}
11. MligTC455_37585 138 2.88 Mlig455_050977

Neo: -

Age: logFC(26M/2M)=-0.353

 MFSD10 0.958 - - - - - 0.958 Mlig455_050977 {REF} {Length: 3495} {TRANSSPLICED} {Pfam: Major Facilitator Superfamily [PF07690.18, score=113.8]; MFS_1 like family [PF12832.9, score=36.9]; Sugar (and other) transporter [PF00083.26, score=30.5]} {Human: ENSG00000109736, MFSD10, major facilitator superfamily domain containing 10, [Score=55.1, Expect=1e-07]} {Mouse: ENSMUSG00000001082, Mfsd10, major facilitator superfamily domain containing 10, [Score=57.0, Expect=2e-08]} {Celegans: WBGene00017339, F10D7.2, [Score=59.3, Expect=4e-09]} {RNA1509_36151} {RNA1310_15615} {RNA815_31475}
12. MligTC455_20136 1475 30.72 Mlig455_002827

Neo: Neoblast

Age: logFC(26M/2M)=0.183

 HNRNPL 0.957 - - - - 0.957 - Mlig455_002827 {REF} {Length: 2567} {TRANSSPLICED} {Pfam: RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) [PF13893.8, score=115.7]; RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) [PF00076.24, score=64.8]; Occluded RNA-recognition motif [PF16842.7, score=37.4]; RRM-like domain [PF11835.10, score=32.5]; RNA binding motif [PF08777.13, score=25.9]; RL domain [PF17797.3, score=25.1]} {Human: ENSG00000282947, HNRNPL, heterogeneous nuclear ribonucleoprotein L, [Score=215, Expect=5e-62]; ENSG00000104824, HNRNPL, heterogeneous nuclear ribonucleoprotein L, [Score=215, Expect=5e-62]} {Mouse: ENSMUSG00000015165, Hnrnpl, heterogeneous nuclear ribonucleoprotein L, [Score=218, Expect=8e-63]} {Dmel: FBgn0003435, sm, smooth, [Score=171, Expect=2e-46]} {Celegans: WBGene00016624, C44B7.2, [Score=112, Expect=5e-26]} {Smed: dd_Smed_v6_1327_0_1, dd_Smed_v6_1327_0_1, [Score=132, Expect=1e-32]} {RNA1509_41629, RNA1509_55636, RNA1509_7039} {RNA1310_5812.1, RNA1509_55636, RNA1509_7039} {RNA1509_55636, RNA1509_7039, RNA815_1539.1}
13. MligTC455_37161 216 4.49 Mlig455_015360

Neo: -

Age: -

 TTC28 0.957 - - - - - 0.957 Mlig455_015360 {REF} {Length: 6317} {TRANSSPLICED} {Pfam: Tetratricopeptide repeat [PF13424.8, score=62.3]; Tetratricopeptide repeat [PF07719.19, score=48.6]; Tetratricopeptide repeat [PF13181.8, score=43.1]; Tetratricopeptide repeat [PF00515.30, score=38.7]; CHAT domain [PF12770.9, score=38.0]; Tetratricopeptide repeat [PF14559.8, score=21.8]; Tetratricopeptide repeat [PF13431.8, score=20.4]; Tetratricopeptide repeat [PF13176.8, score=19.4]} {Human: ENSG00000100154, TTC28, tetratricopeptide repeat domain 28, [Score=66.6, Expect=5e-10]} {Mouse: ENSMUSG00000033209, Ttc28, tetratricopeptide repeat domain 28, [Score=67.8, Expect=1e-10]} {RNA1509_5411} {RNA1310_761.2} {RNA815_600}
14. MligTC455_36661 127 2.66 Mlig455_013611

Neo: -

Age: -

 TUBGCP4 0.956 - - - - - 0.956 Mlig455_013611 {REF} {Length: 3343} {TRANSSPLICED} {Pfam: Gamma tubulin complex component N-terminal [PF17681.3, score=180.8]; Gamma tubulin complex component C-terminal [PF04130.15, score=175.2]} {Human: ENSG00000137822, TUBGCP4, tubulin gamma complex associated protein 4, [RH, Score=379, Expect=3e-122]} {Mouse: ENSMUSG00000027263, Tubgcp4, tubulin, gamma complex associated protein 4, [RH, Score=376, Expect=3e-121]} {Dmel: FBgn0026431, Grip75, [RH, Score=211, Expect=2e-59]} {Smed: dd_Smed_v6_11306_0_1, dd_Smed_v6_11306_0_1, [RH, Score=335, Expect=6e-106]} {RNA1509_20258, RNA1509_45019} {RNA1310_6475, RNA1509_45019} {RNA1509_45019, RNA815_4392}
15. MligTC455_39082 4841 100.84 Mlig455_014058, Mlig455_014065, Mlig455_014085, Mlig455_052552

Neo: -

Age: logFC(26M/2M)=0.524

Region-enriched R4: 1.100/0.01204

 RHOA, RHOC 0.954 - - - - 0.954 -

Mlig455_014058 {REF} {Length: 1981} {TRANSSPLICED} {Pfam: Ras family [PF00071.24, score=195.6]; Ras of Complex, Roc, domain of DAPkinase [PF08477.15, score=80.4]; ADP-ribosylation factor family [PF00025.23, score=43.2]; Elongation factor Tu GTP binding domain [PF00009.29, score=25.6]} {Human: ENSG00000155366, RHOC, ras homolog family member C, [RH, Score=344, Expect=4e-122]; ENSG00000067560, RHOA, ras homolog family member A, [RH, Score=344, Expect=3e-122]; ENSG00000143878, RHOB, ras homolog family member B, [RH, Score=332, Expect=3e-117]} {Mouse: ENSMUSG00000007815, Rhoa, ras homolog family member A, [RH, Score=345, Expect=1e-122]; ENSMUSG00000002233, Rhoc, ras homolog family member C, [RH, Score=344, Expect=3e-122]; ENSMUSG00000054364, Rhob, ras homolog family member B, [RH, Score=332, Expect=2e-117]} {Dmel: FBgn0014020, Rho1, [RH, Score=333, Expect=3e-118]} {Celegans: WBGene00004357, rho-1, Ras-like GTP-binding protein rhoA, [RH, Score=326, Expect=1e-115]} {Smed: dd_Smed_v6_813_0_1, dd_Smed_v6_813_0_1, [RH, Score=341, Expect=1e-121]} {RNA1509_24154, RNA1509_7828} {RNA1310_16035.2, RNA1509_7828} {RNA1509_7828, RNA815_11544.2}

Mlig455_014065 {REF} {Length: 1931} {TRANSSPLICED} {Pfam: Ras family [PF00071.24, score=195.6]; Ras of Complex, Roc, domain of DAPkinase [PF08477.15, score=80.4]; ADP-ribosylation factor family [PF00025.23, score=43.2]; Elongation factor Tu GTP binding domain [PF00009.29, score=25.6]} {Human: ENSG00000155366, RHOC, ras homolog family member C, [RH, Score=344, Expect=4e-122]; ENSG00000067560, RHOA, ras homolog family member A, [RH, Score=344, Expect=3e-122]; ENSG00000143878, RHOB, ras homolog family member B, [RH, Score=332, Expect=3e-117]} {Mouse: ENSMUSG00000007815, Rhoa, ras homolog family member A, [RH, Score=345, Expect=1e-122]; ENSMUSG00000002233, Rhoc, ras homolog family member C, [RH, Score=344, Expect=3e-122]; ENSMUSG00000054364, Rhob, ras homolog family member B, [RH, Score=332, Expect=2e-117]} {Dmel: FBgn0014020, Rho1, [RH, Score=333, Expect=3e-118]} {Celegans: WBGene00004357, rho-1, Ras-like GTP-binding protein rhoA, [RH, Score=326, Expect=1e-115]} {Smed: dd_Smed_v6_813_0_1, dd_Smed_v6_813_0_1, [RH, Score=341, Expect=1e-121]} {RNA1509_24154, RNA1509_54708} {RNA1310_16035.2, RNA1509_54708} {RNA1509_54708, RNA815_11544.2}

Mlig455_014085 {REF} {Length: 2200} {Pfam: Ras family [PF00071.24, score=130.2]; Ras of Complex, Roc, domain of DAPkinase [PF08477.15, score=50.3]; Elongation factor Tu GTP binding domain [PF00009.29, score=24.8]; ADP-ribosylation factor family [PF00025.23, score=20.7]; Cas9 alpha-helical lobe domain [PF18470.3, score=18.5]} {Human: ENSG00000067560, RHOA, ras homolog family member A, [Score=249, Expect=2e-83]; ENSG00000155366, RHOC, ras homolog family member C, [Score=248, Expect=1e-82]} {Mouse: ENSMUSG00000007815, Rhoa, ras homolog family member A, [Score=249, Expect=1e-83]; ENSMUSG00000002233, Rhoc, ras homolog family member C, [Score=248, Expect=7e-83]} {Dmel: FBgn0014020, Rho1, [Score=241, Expect=3e-80]} {Celegans: WBGene00004357, rho-1, Ras-like GTP-binding protein rhoA, [Score=232, Expect=8e-77]} {Smed: dd_Smed_v6_813_0_1, dd_Smed_v6_813_0_1, [Score=249, Expect=1e-83]} {RNA1509_24154} {RNA1310_16035.2} {RNA815_21490.1}

Mlig455_052552 {REF} {Length: 1978} {TRANSSPLICED} {Pfam: Ras family [PF00071.24, score=195.6]; Ras of Complex, Roc, domain of DAPkinase [PF08477.15, score=80.4]; ADP-ribosylation factor family [PF00025.23, score=43.2]; Elongation factor Tu GTP binding domain [PF00009.29, score=25.6]} {Human: ENSG00000155366, RHOC, ras homolog family member C, [RH, Score=344, Expect=4e-122]; ENSG00000067560, RHOA, ras homolog family member A, [RH, Score=344, Expect=3e-122]; ENSG00000143878, RHOB, ras homolog family member B, [RH, Score=332, Expect=3e-117]} {Mouse: ENSMUSG00000007815, Rhoa, ras homolog family member A, [RH, Score=345, Expect=1e-122]; ENSMUSG00000002233, Rhoc, ras homolog family member C, [RH, Score=344, Expect=3e-122]; ENSMUSG00000054364, Rhob, ras homolog family member B, [RH, Score=332, Expect=2e-117]} {Dmel: FBgn0014020, Rho1, [RH, Score=333, Expect=3e-118]} {Celegans: WBGene00004357, rho-1, Ras-like GTP-binding protein rhoA, [RH, Score=326, Expect=1e-115]} {Smed: dd_Smed_v6_813_0_1, dd_Smed_v6_813_0_1, [RH, Score=341, Expect=1e-121]} {RNA1509_24154, RNA1509_42059} {RNA1310_16035.2, RNA1509_42059} {RNA1509_42059, RNA815_11544.2}
16. MligTC455_17960 44 0.92 Mlig455_021047

Neo: -

Age: -

Region-enriched R2: 4.515/0.04131
Region-enriched R4: 3.266/0.03072

 0.953 - - - - - 0.953 Mlig455_021047 {REF} {Length: 2114} {Pfam: SH3 domain [PF17902.3, score=25.9]; Plectin repeat [PF00681.22, score=23.8]} {Smed: dd_Smed_v6_16329_0_1, dd_Smed_v6_16329_0_1, [Score=56.6, Expect=2e-08]} {RNA1509_53557} {RNA1310_11354} {RNA815_18566}
17. MligTC455_24566 136 2.84 Mlig455_035653

Neo: -

Age: -

 PEF1 0.953 - - - - - 0.953 Mlig455_035653 {REF} {Length: 2346} {TRANSSPLICED} {Pfam: EF-hand domain [PF13405.8, score=40.9]; EF hand [PF00036.34, score=40.4]; EF-hand domain pair [PF13499.8, score=34.8]; EF hand [PF13202.8, score=29.3]; EF-hand domain pair [PF13833.8, score=20.3]} {Human: ENSG00000162517, PEF1, penta-EF-hand domain containing 1, [Score=73.2, Expect=5e-15]} {Mouse: ENSMUSG00000028779, Pef1, penta-EF hand domain containing 1, [Score=75.5, Expect=5e-16]} {Smed: dd_Smed_v6_6190_0_1, dd_Smed_v6_6190_0_1, [Score=73.2, Expect=3e-16]} {RNA1509_33230} {RNA1310_37065} {RNA815_24745}
18. MligTC455_16131 92 1.91 Mlig455_067511

Neo: -

Age: Up-Down-Up

 KDM1B 0.952 - - - - - 0.952 Mlig455_067511 {REF} {Length: 3972} {TRANSSPLICED} {Pfam: Flavin containing amine oxidoreductase [PF01593.26, score=85.1]; CW-type Zinc Finger [PF07496.17, score=19.5]} {Human: ENSG00000165097, KDM1B, lysine demethylase 1B, [Score=154, Expect=1e-37]} {Mouse: ENSMUSG00000038080, Kdm1b, lysine (K)-specific demethylase 1B, [Score=145, Expect=4e-35]} {Dmel: FBgn0260397, Su(var)3-3, Suppressor of variegation 3-3, [Score=67.4, Expect=5e-11]} {Celegans: WBGene00000137, amx-1, Amine oxidase family member 1, [Score=62.0, Expect=2e-09]} {Smed: dd_Smed_v6_4269_0_4, dd_Smed_v6_4269_0_4, [RH, Score=112, Expect=1e-25]} {RNA1509_34924} {RNA1310_10646} {RNA815_4287}
19. MligTC455_24565 141 2.93 Mlig455_021782

Neo: -

Age: Down-Up-Up

 0.952 - - - - - 0.952 Mlig455_021782 {REF} {Length: 1366} {NoTransDecoderORF} {RNA1310_37065} {RNA815_50492}
20. MligTC455_49238 255 5.3 Mlig455_014004

Neo: -

Age: -

Region-enriched R5: 2.000/0.03005

 TAF6 0.952 - - - - - 0.952 Mlig455_014004 {REF} {Length: 2537} {TRANSSPLICED} {Pfam: TAF6 C-terminal HEAT repeat domain [PF07571.15, score=78.7]; TATA box binding protein associated factor (TAF) [PF02969.19, score=62.9]} {Human: ENSG00000106290, TAF6, TATA-box binding protein associated factor 6, [RH, Score=365, Expect=1e-118]} {Mouse: ENSMUSG00000036980, Taf6, TATA-box binding protein associated factor 6, [RH, Score=363, Expect=7e-119]} {Dmel: FBgn0010417, Taf6, TBP-associated factor 6, [RH, Score=345, Expect=3e-112]} {Celegans: WBGene00006387, taf-6.1, TAF (TBP-associated transcription factor) family, [RH, Score=122, Expect=7e-30]} {Smed: dd_Smed_v6_817_0_1, dd_Smed_v6_817_0_1, [RH, Score=183, Expect=2e-51]} {RNA1509_29190, RNA1509_34817} {RNA1310_15365, RNA1509_29190, RNA1509_34817} {RNA1509_29190, RNA1509_34817, RNA815_35920}
21. MligTC455_13855 1047 21.81 Mlig455_054846

Neo: -

Age: -

 SACM1L 0.951 - - - - 0.951 - Mlig455_054846 {REF} {Length: 2878} {Pfam: SacI homology domain [PF02383.20, score=265.8]} {Human: ENSG00000211456, SACM1L, SAC1 like phosphatidylinositide phosphatase, [Score=458, Expect=3e-154]} {Mouse: ENSMUSG00000025240, Sacm1l, SAC1 suppressor of actin mutations 1-like (yeast), [Score=458, Expect=1e-154]} {Dmel: FBgn0283500, Sac1, Sac1 phosphatase, [RH, Score=433, Expect=9e-145]} {Celegans: WBGene00009264, sac-1, SAC1 PIP phosphatase (Yeast Suppressor of ACtin) homolog, [RH, Score=413, Expect=4e-137]} {Smed: dd_Smed_v6_3882_0_1, dd_Smed_v6_3882_0_1, [Score=421, Expect=3e-140]} {RNA1509_12946, RNA1509_25363} {RNA1310_6188.1, RNA1509_12946, RNA1509_25363} {RNA1509_12946, RNA1509_25363, RNA815_2277.1}
22. MligTC455_24352 968 20.17 Mlig455_024177, Mlig455_024195

Neo: -

Age: logFC(26M/2M)=-0.541

 RHBG 0.95 - - - - - 0.950

Mlig455_024177 {REF} {Length: 2334} {Pfam: Ammonium Transporter Family [PF00909.23, score=240.1]} {Human: ENSG00000132677, RHBG, Rh family B glycoprotein (gene/pseudogene), [RH, Score=384, Expect=5e-129]} {Mouse: ENSMUSG00000023926, Rhag, Rhesus blood group-associated A glycoprotein, [RH, Score=370, Expect=7e-124]; ENSMUSG00000104445, Rhbg, Rhesus blood group-associated B glycoprotein, [RH, Score=353, Expect=5e-117]} {Dmel: FBgn0028699, Rh50, [RH, Score=372, Expect=3e-124]} {Celegans: WBGene00004358, rhr-1, RH (Rhesus) antigen Related, [RH, Score=357, Expect=1e-118]} {Smed: dd_Smed_v6_1882_0_2, dd_Smed_v6_1882_0_2, [Score=400, Expect=1e-135]} {RNA1509_21244, RNA1509_31957, RNA1509_49768} {RNA1310_10990, RNA1509_21244, RNA1509_31957, RNA1509_49768} {RNA1509_21244, RNA1509_31957, RNA1509_49768, RNA815_4501.1}

Mlig455_024195 {REF} {Length: 3261} {Pfam: Ammonium Transporter Family [PF00909.23, score=236.6]} {Human: ENSG00000132677, RHBG, Rh family B glycoprotein (gene/pseudogene), [RH, Score=382, Expect=3e-128]} {Mouse: ENSMUSG00000104445, Rhbg, Rhesus blood group-associated B glycoprotein, [RH, Score=352, Expect=5e-117]} {Dmel: FBgn0028699, Rh50, [RH, Score=372, Expect=6e-125]} {Celegans: WBGene00004358, rhr-1, RH (Rhesus) antigen Related, [Score=354, Expect=8e-118]} {Smed: dd_Smed_v6_1882_0_2, dd_Smed_v6_1882_0_2, [Score=397, Expect=9e-135]} {RNA1509_21244} {RNA1310_10990} {RNA815_4501.1}
23. MligTC455_49013 277 5.78 Mlig455_006233

Neo: -

Age: Down-Up-Down

 UBL3 0.95 - - - - - 0.950 Mlig455_006233 {REF} {Length: 2378} {TRANSSPLICED} {Pfam: Ubiquitin-2 like Rad60 SUMO-like [PF13881.8, score=87.5]; Ubiquitin family [PF00240.25, score=19.0]} {Human: ENSG00000122042, UBL3, ubiquitin like 3, [RH, Score=150, Expect=2e-47]} {Mouse: ENSMUSG00000001687, Ubl3, ubiquitin-like 3, [RH, Score=149, Expect=3e-47]} {Dmel: FBgn0026076, UBL3, Ubiquitin like 3, [RH, Score=145, Expect=1e-42]} {Celegans: WBGene00008121, C46F11.6, Ubiquitin-like protein, [Score=114, Expect=2e-33]} {Smed: dd_Smed_v6_10574_0_1, dd_Smed_v6_10574_0_1, [Score=107, Expect=7e-31]} {RNA1509_29746} {RNA1310_56429} {RNA815_28925}

Refine r cutoff to:    Show

Berezikov Lab - 2020-2021 © ERIBA