TomoSeq data search

Data search

Results for MligTC455_47649

Cluster

Total UMI counts

Global CPM

Transcripts

Categories

Human homolog

Annotation

MligTC455_47649

165

3.43

Mlig455_001268, Mlig455_034622

Neo: -

Age: Up-Down-Down

PARD3, PARD3B

Mlig455_001268 {REF} {Length: 5544} {TRANSSPLICED} {Pfam: PDZ domain [PF00595.26, score=91.6]; PDZ domain [PF13180.8, score=46.7]; PDZ domain [PF17820.3, score=41.1]} {Human: ENSG00000148498, PARD3, par-3 family cell polarity regulator, [Score=163, Expect=2e-40]; ENSG00000116117, PARD3B, par-3 family cell polarity regulator beta, [Score=160, Expect=1e-39]} {Mouse: ENSMUSG00000052062, Pard3b, par-3 family cell polarity regulator beta, [Score=163, Expect=1e-40]; ENSMUSG00000025812, Pard3, par-3 family cell polarity regulator, [Score=160, Expect=9e-40]} {Dmel: FBgn0000163, baz, bazooka, [Score=99.4, Expect=9e-21]} {Celegans: WBGene00003918, par-3, Partitioning defective protein 3, [Score=113, Expect=3e-25]} {Smed: dd_Smed_v6_11296_0_2, dd_Smed_v6_11296_0_2, [Score=126, Expect=2e-29]} {RNA1509_14759} {RNA1310_8206.1} {RNA815_11041}

Mlig455_034622 {REF} {Length: 5575} {TRANSSPLICED} {Pfam: PDZ domain [PF00595.26, score=127.2]; N-terminal of Par3 and HAL proteins [PF12053.10, score=74.2]; PDZ domain [PF17820.3, score=71.0]; PDZ domain [PF13180.8, score=56.5]} {Human: ENSG00000116117, PARD3B, par-3 family cell polarity regulator beta, [Score=200, Expect=1e-51]} {Mouse: ENSMUSG00000052062, Pard3b, par-3 family cell polarity regulator beta, [Score=200, Expect=1e-51]} {Dmel: FBgn0000163, baz, bazooka, [Score=99.0, Expect=2e-20]} {Celegans: WBGene00003918, par-3, Partitioning defective protein 3, [Score=112, Expect=8e-25]} {Smed: dd_Smed_v6_11296_0_2, dd_Smed_v6_11296_0_2, [Score=155, Expect=7e-38]} {RNA1509_14759} {RNA1310_8206.1} {RNA815_11041}

Cumulative graph for MligTC455_47649

Region-enriched expression

Region	logFC	logCPM	Pvalue	FDR	Specificity
RegionR1	-0.647	2.434	0.69968	1.00000
RegionR2	1.408	2.434	0.07362	0.33125
RegionR3	-0.414	2.434	0.50342	0.99577
RegionR4	-1.511	2.434	0.06259	0.22453
RegionR5	-0.988	2.434	0.08324	0.26929
RegionR6	0.167	2.434	0.78230	1.00000
RegionR7	1.527	2.434	0.02296	0.28319
RegionR8	0.457	2.434	0.64689	1.00000

Regeneration-enriched expression

Region	logFC	logCPM	PValue	FDR	Specificity
RegenerationR1	-3.142	2.434	0.62509	1.00000
RegenerationR2	0.159	2.434	0.79083	0.98675
RegenerationR3	1.395	2.434	0.06887	0.44055
RegenerationR4	0.684	2.434	0.39669	0.81105
RegenerationR5	1.235	2.434	0.06871	0.41217
RegenerationR6	0.134	2.434	0.84939	1.00000
RegenerationBL	0.176	2.434	0.84324	1.00000
RegenerationTP	-2.502	2.434	0.06527	0.41179

Genes with expression patterns similar to MligTC455_47649

Nr.	Cluster	Total UMI counts	Global CPM	Transcripts	Categories	Human homolog	Σ Spearman correlations	Int1	Int2	Int3	Reg1	Reg2	Reg3	Annotation
1.	MligTC455_47649	165	3.43	Mlig455_001268, Mlig455_034622	Neo: - Age: Up-Down-Down	PARD3, PARD3B	6	1.000	1.000	1.000	1.000	1.000	1.000	Mlig455_001268 {REF} {Length: 5544} {TRANSSPLICED} {Pfam: PDZ domain [PF00595.26, score=91.6]; PDZ domain [PF13180.8, score=46.7]; PDZ domain [PF17820.3, score=41.1]} {Human: ENSG00000148498, PARD3, par-3 family cell polarity regulator, [Score=163, Expect=2e-40]; ENSG00000116117, PARD3B, par-3 family cell polarity regulator beta, [Score=160, Expect=1e-39]} {Mouse: ENSMUSG00000052062, Pard3b, par-3 family cell polarity regulator beta, [Score=163, Expect=1e-40]; ENSMUSG00000025812, Pard3, par-3 family cell polarity regulator, [Score=160, Expect=9e-40]} {Dmel: FBgn0000163, baz, bazooka, [Score=99.4, Expect=9e-21]} {Celegans: WBGene00003918, par-3, Partitioning defective protein 3, [Score=113, Expect=3e-25]} {Smed: dd_Smed_v6_11296_0_2, dd_Smed_v6_11296_0_2, [Score=126, Expect=2e-29]} {RNA1509_14759} {RNA1310_8206.1} {RNA815_11041} Mlig455_034622 {REF} {Length: 5575} {TRANSSPLICED} {Pfam: PDZ domain [PF00595.26, score=127.2]; N-terminal of Par3 and HAL proteins [PF12053.10, score=74.2]; PDZ domain [PF17820.3, score=71.0]; PDZ domain [PF13180.8, score=56.5]} {Human: ENSG00000116117, PARD3B, par-3 family cell polarity regulator beta, [Score=200, Expect=1e-51]} {Mouse: ENSMUSG00000052062, Pard3b, par-3 family cell polarity regulator beta, [Score=200, Expect=1e-51]} {Dmel: FBgn0000163, baz, bazooka, [Score=99.0, Expect=2e-20]} {Celegans: WBGene00003918, par-3, Partitioning defective protein 3, [Score=112, Expect=8e-25]} {Smed: dd_Smed_v6_11296_0_2, dd_Smed_v6_11296_0_2, [Score=155, Expect=7e-38]} {RNA1509_14759} {RNA1310_8206.1} {RNA815_11041}
2.	MligTC455_41166	13	0.27	Mlig455_032318	Neo: - Age: -		0.984	-	-	-	-	0.984	-	Mlig455_032318 {REF} {Length: 676} {NoTransDecoderORF} {RNA1310_106048} {RNA815_17657}
3.	MligTC455_42677	249	5.18	Mlig455_020476	Neo: - Age: -		0.984	-	-	-	-	0.984	-	Mlig455_020476 {REF} {Length: 1858} {TRANSSPLICED} {RNA1509_34250} {RNA1310_13323} {RNA815_20547}
4.	MligTC455_20968	103	2.14	Mlig455_027054	Neo: - Age: -	CDC42BPG	0.968	-	-	0.968	-	-	-	Mlig455_027054 {REF} {Length: 8447} {TRANSSPLICED} {Pfam: Protein kinase domain [PF00069.27, score=176.2]; CNH domain [PF00780.24, score=84.4]; Protein tyrosine and serine/threonine kinase [PF07714.19, score=77.6]; Phorbol esters/diacylglycerol binding domain (C1 domain) [PF00130.24, score=35.1]; PH domain [PF00169.31, score=24.0]} {Human: ENSG00000171219, CDC42BPG, CDC42 binding protein kinase gamma, [RH, Score=739, Expect=0.0]} {Mouse: ENSMUSG00000107268, Cdc42bpg, CDC42 binding protein kinase gamma (DMPK-like), [RH, Score=748, Expect=0.0]; ENSMUSG00000024769, Cdc42bpg, CDC42 binding protein kinase gamma (DMPK-like), [RH, Score=748, Expect=0.0]} {Dmel: FBgn0023081, gek, genghis khan, [RH, Score=795, Expect=0.0]} {Celegans: WBGene00006437, mrck-1, Serine/threonine-protein kinase mrck-1, [RH, Score=738, Expect=0.0]} {Smed: dd_Smed_v6_2586_0_1, dd_Smed_v6_2586_0_1, [RH, Score=392, Expect=6e-113]} {RNA1509_5323} {RNA1310_2421, RNA1509_5323} {RNA1509_5323, RNA815_2352}
5.	MligTC455_21756	20	0.42	Mlig455_057868	Neo: - Age: -		0.968	-	-	0.968	-	-	-	Mlig455_057868 {REF} {Length: 1746} {Pfam: F5/8 type C domain [PF00754.27, score=36.3]} {RNA1310_33166} {RNA815_14716}
6.	MligTC455_49976	325	6.78	Mlig455_070272	Neo: - Age: Up-Down-Down Region-enriched R5: 1.635/0.03810	PTK7	0.963	-	-	-	-	-	0.963	Mlig455_070272 {REF} {Length: 7388} {Pfam: Immunoglobulin domain [PF13927.8, score=137.1]; Protein tyrosine and serine/threonine kinase [PF07714.19, score=130.7]; Immunoglobulin I-set domain [PF07679.18, score=114.2]; Immunoglobulin V-set domain [PF07686.19, score=89.7]; Protein kinase domain [PF00069.27, score=85.3]; Immunoglobulin domain [PF13895.8, score=69.0]; Immunoglobulin domain [PF00047.27, score=60.7]; CD80-like C2-set immunoglobulin domain [PF08205.14, score=19.6]} {Human: ENSG00000112655, PTK7, protein tyrosine kinase 7 (inactive), [Score=110, Expect=7e-24]; ENSG00000148053, NTRK2, neurotrophic receptor tyrosine kinase 2, [Score=107, Expect=5e-23]; ENSG00000007264, MATK, megakaryocyte-associated tyrosine kinase, [Score=105, Expect=8e-23]; ENSG00000140538, NTRK3, neurotrophic receptor tyrosine kinase 3, [Score=105, Expect=4e-22]} {Mouse: ENSMUSG00000055254, Ntrk2, neurotrophic tyrosine kinase, receptor, type 2, [Score=107, Expect=4e-23]; ENSMUSG00000028072, Ntrk1, neurotrophic tyrosine kinase, receptor, type 1, [Score=107, Expect=5e-23]; ENSMUSG00000023972, Ptk7, PTK7 protein tyrosine kinase 7, [Score=107, Expect=7e-23]; ENSMUSG00000059146, Ntrk3, neurotrophic tyrosine kinase, receptor, type 3, [Score=105, Expect=2e-22]; ENSMUSG00000038751, Ptk6, PTK6 protein tyrosine kinase 6, [Score=102, Expect=3e-22]; ENSMUSG00000053158, Fes, feline sarcoma oncogene, [Score=102, Expect=1e-21]} {Dmel: FBgn0010389, htl, heartless, [Score=95.1, Expect=2e-19]} {Celegans: WBGene00017381, svh-4, Discoidin domain-containing receptor tyrosine kinase B, [Score=117, Expect=2e-26]} {Smed: dd_Smed_v6_6999_0_1, dd_Smed_v6_6999_0_1, [Score=259, Expect=1e-70]} {RNA1509_38212} {RNA1310_1389} {RNA815_9748}
7.	MligTC455_26546	67	1.4	Mlig455_017556	Neo: - Age: logFC(26M/2M)=1.225	CSPP1	0.958	-	-	-	-	0.958	-	Mlig455_017556 {REF} {Length: 3917} {TRANSSPLICED} {Human: ENSG00000104218, CSPP1, centrosome and spindle pole associated protein 1, [Score=82.8, Expect=3e-15]} {Mouse: ENSMUSG00000056763, Cspp1, centrosome and spindle pole associated protein 1, [Score=100, Expect=6e-21]} {Smed: dd_Smed_v6_13453_0_1, dd_Smed_v6_13453_0_1, [Score=86.7, Expect=4e-17]} {RNA1509_7480} {RNA1310_2740.1} {RNA815_13668}
8.	MligTC455_43914	455	9.48	Mlig455_029652	Neo: - Age: logFC(26M/2M)=-0.308	MAP3K19	0.953	-	-	-	-	0.953	-	Mlig455_029652 {REF} {Length: 3670} {Pfam: Protein kinase domain [PF00069.27, score=197.1]; Protein tyrosine and serine/threonine kinase [PF07714.19, score=156.1]; Ankyrin repeats (many copies) [PF13637.8, score=39.7]; Ankyrin repeats (3 copies) [PF12796.9, score=37.3]; ABC1 atypical kinase-like domain [PF03109.18, score=36.0]; Ankyrin repeat [PF13606.8, score=25.5]; Ankyrin repeats (many copies) [PF13857.8, score=22.9]; SDA1 [PF05285.14, score=21.7]; Presenilin [PF01080.19, score=18.1]; Topoisomerase II-associated protein PAT1 [PF09770.11, score=17.6]} {Human: ENSG00000176601, MAP3K19, mitogen-activated protein kinase kinase kinase 19, [Score=147, Expect=3e-36]; ENSG00000065613, SLK, STE20 like kinase, [Score=143, Expect=5e-35]; ENSG00000180815, MAP3K15, mitogen-activated protein kinase kinase kinase 15, [Score=140, Expect=3e-34]} {Mouse: ENSMUSG00000051590, Map3k19, mitogen-activated protein kinase kinase kinase 19, [Score=152, Expect=6e-38]} {Dmel: FBgn0266465, GckIII, Germinal centre kinase III, [Score=142, Expect=2e-35]} {Celegans: WBGene00003822, nsy-1, Mitogen-activated protein kinase kinase kinase nsy-1, [Score=122, Expect=9e-29]} {Smed: dd_Smed_v6_9041_0_1, dd_Smed_v6_9041_0_1, [Score=142, Expect=8e-38]} {RNA1509_6476} {RNA1310_7553.1} {RNA815_7535.1}
9.	MligTC455_33647	110	2.29	Mlig455_042597, Mlig455_042610, Mlig455_042641	Neo: - Age: -		0.95	-	-	0.950	-	-	-	Mlig455_042597 {REF} {Length: 3620} {Dmel: FBgn0263993, CG43736, [RH, Score=83.6, Expect=5e-16]} {RNA1509_3896} {RNA1310_1327} {RNA815_6275} Mlig455_042610 {REF} {Length: 3340} {Dmel: FBgn0263993, CG43736, [RH, Score=83.6, Expect=4e-16]} {RNA1509_57541} {RNA1310_1327} {RNA815_6275} Mlig455_042641 {REF} {Length: 5491} {Dmel: FBgn0263993, CG43736, [RH, Score=83.6, Expect=5e-16]} {RNA1509_3896} {RNA1310_1327} {RNA815_2293.1}

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