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Results for MligTC455_47682

Cluster Total UMI counts Global CPM Transcripts Categories Human homolog Annotation
MligTC455_47682 372 7.75 Mlig455_000868

Neo: -

Age: -

PGGT1B Mlig455_000868 {REF} {Length: 3564} {TRANSSPLICED} {Pfam: Prenyltransferase and squalene oxidase repeat [PF00432.23, score=89.5]} {Human: ENSG00000164219, PGGT1B, protein geranylgeranyltransferase type I subunit beta, [RH, Score=265, Expect=3e-82]} {Mouse: ENSMUSG00000024477, Pggt1b, protein geranylgeranyltransferase type I, beta subunit, [RH, Score=264, Expect=3e-82]} {Dmel: FBgn0015000, betaggt-I, beta subunit of type I geranylgeranyl transferase, [RH, Score=223, Expect=1e-66]} {Celegans: WBGene00013002, Y48E1B.3, [RH, Score=213, Expect=2e-63]} {Smed: dd_Smed_v6_4004_0_1, dd_Smed_v6_4004_0_1, [RH, Score=298, Expect=9e-96]} {RNA1509_27906, RNA1509_39302} {RNA1310_12509.1, RNA1509_27906, RNA1509_39302} {RNA1509_27906, RNA1509_39302, RNA815_10411}

Cumulative graph for MligTC455_47682

Region-enriched expression

Region logFC logCPM Pvalue FDR Specificity
RegionR1 -0.097 3.335 0.95076 1.00000
RegionR2 0.33 3.335 0.57467 0.93254
RegionR3 -0.393 3.335 0.41692 0.94183
RegionR4 0.41 3.335 0.46668 0.79462
RegionR5 0.97 3.335 0.01205 0.06613
RegionR6 -0.161 3.335 0.73970 1.00000
RegionR7 -0.254 3.335 0.70374 1.00000
RegionR8 -0.806 3.335 0.35326 0.98701

Regeneration-enriched expression

Region logFC logCPM PValue FDR Specificity
RegenerationR1 1.644 3.335 0.35813 1.00000
RegenerationR2 -0.05 3.335 0.90796 1.00000
RegenerationR3 0.381 3.335 0.47352 0.84608
RegenerationR4 -0.035 3.335 0.94592 1.00000
RegenerationR5 -0.15 3.335 0.73360 0.96530
RegenerationR6 0.696 3.335 0.19582 0.53554
RegenerationBL 0.36 3.335 0.63870 0.97773
RegenerationTP 0.982 3.335 0.17297 0.60562


Genes with expression patterns similar to MligTC455_47682

Nr. Cluster Total UMI counts Global CPM Transcripts Categories Human homolog Σ Spearman correlations Int1 Int2 Int3 Reg1 Reg2 Reg3 Annotation
1. MligTC455_47682 372 7.75 Mlig455_000868

Neo: -

Age: -

PGGT1B 6 1.000 1.000 1.000 1.000 1.000 1.000 Mlig455_000868 {REF} {Length: 3564} {TRANSSPLICED} {Pfam: Prenyltransferase and squalene oxidase repeat [PF00432.23, score=89.5]} {Human: ENSG00000164219, PGGT1B, protein geranylgeranyltransferase type I subunit beta, [RH, Score=265, Expect=3e-82]} {Mouse: ENSMUSG00000024477, Pggt1b, protein geranylgeranyltransferase type I, beta subunit, [RH, Score=264, Expect=3e-82]} {Dmel: FBgn0015000, betaggt-I, beta subunit of type I geranylgeranyl transferase, [RH, Score=223, Expect=1e-66]} {Celegans: WBGene00013002, Y48E1B.3, [RH, Score=213, Expect=2e-63]} {Smed: dd_Smed_v6_4004_0_1, dd_Smed_v6_4004_0_1, [RH, Score=298, Expect=9e-96]} {RNA1509_27906, RNA1509_39302} {RNA1310_12509.1, RNA1509_27906, RNA1509_39302} {RNA1509_27906, RNA1509_39302, RNA815_10411}
2. MligTC455_30336 3591 74.81 Mlig455_009403, Mlig455_036921

Neo: Int S/G2/M

Age: -

2.497 0.720 - - 0.798 0.979 -

Mlig455_009403 {REF} {Length: 1869} {TRANSSPLICED} {Pfam: C-terminal duplication domain of Friend of PRMT1 [PF13865.8, score=27.5]} {RNA1509_16417, RNA1509_20669} {RNA1310_14143, RNA1509_16417, RNA1509_20669} {RNA1509_16417, RNA1509_20669, RNA815_6550.1}

Mlig455_036921 {REF} {Length: 2321} {TRANSSPLICED} {Pfam: C-terminal duplication domain of Friend of PRMT1 [PF13865.8, score=28.4]} {RNA1509_15581, RNA1509_16417, RNA1509_29379, RNA1509_33502, RNA1509_50154} {RNA1310_14143, RNA1509_15581, RNA1509_29379, RNA1509_33502, RNA1509_50154} {RNA1509_15581, RNA1509_29379, RNA1509_33502, RNA1509_50154, RNA815_6550.1}
3. MligTC455_38081 291 6.07 Mlig455_033767

Neo: -

Age: -

Region-enriched R5: 2.060/0.00325

NOSTRIN 1.778 - - 0.826 - 0.952 - Mlig455_033767 {REF} {Length: 3179} {TRANSSPLICED} {Pfam: Variant SH3 domain [PF14604.8, score=60.2]; SH3 domain [PF00018.30, score=58.8]; Fes/CIP4, and EFC/F-BAR homology domain [PF00611.25, score=43.2]; Variant SH3 domain [PF07653.19, score=40.4]} {Human: ENSG00000163072, NOSTRIN, nitric oxide synthase trafficking, [RH, Score=153, Expect=3e-39]} {Mouse: ENSMUSG00000034738, Nostrin, nitric oxide synthase trafficker, [RH, Score=133, Expect=2e-32]} {Dmel: FBgn0259734, Nost, Nostrin, [RH, Score=239, Expect=2e-66]} {Celegans: WBGene00012891, sorb-1, SORBin homolog, [Score=65.5, Expect=7e-11]} {Smed: dd_Smed_v6_4715_0_3, dd_Smed_v6_4715_0_3, [RH, Score=244, Expect=5e-72]} {RNA1509_18969} {RNA1310_11383.1, RNA1509_18969} {RNA1509_18969, RNA815_7401}
4. MligTC455_44322 200 4.16 Mlig455_053564

Neo: Int S/G2/M

Age: -

UPF3A 1.686 - - 0.725 - 0.961 - Mlig455_053564 {REF} {Length: 2533} {Pfam: Smg-4/UPF3 family [PF03467.17, score=132.6]} {Human: ENSG00000169062, UPF3A, UPF3A, regulator of nonsense mediated mRNA decay, [RH, Score=106, Expect=2e-24]; ENSG00000125351, UPF3B, UPF3B, regulator of nonsense mediated mRNA decay, [RH, Score=106, Expect=3e-24]} {Mouse: ENSMUSG00000036572, Upf3b, UPF3 regulator of nonsense transcripts homolog B (yeast), [RH, Score=107, Expect=6e-25]} {Dmel: FBgn0034923, Upf3, [RH, Score=114, Expect=3e-27]} {Celegans: WBGene00004882, smg-4, Suppressor with Morphological effect on Genitalia, [RH, Score=73.9, Expect=3e-14]} {RNA1509_14867} {RNA1310_17638} {RNA815_32496}
5. MligTC455_43023 114 2.37 Mlig455_020279

Neo: -

Age: -

Region-enriched R2: 3.934/0.02495

ZNF93 1.667 0.716 - - - 0.951 - Mlig455_020279 {REF} {Length: 2734} {TRANSSPLICED} {Pfam: C2H2-type zinc finger [PF13894.8, score=101.7]; Zinc finger, C2H2 type [PF00096.28, score=82.8]; Zinc-finger double domain [PF13465.8, score=74.4]; Zinc-finger double-stranded RNA-binding [PF12171.10, score=33.3]; C2HE / C2H2 / C2HC zinc-binding finger [PF16278.7, score=19.7]} {Human: ENSG00000184635, ZNF93, zinc finger protein 93, [Score=167, Expect=2e-44]; ENSG00000167232, ZNF91, zinc finger protein 91, [Score=162, Expect=1e-41]; ENSG00000263002, ZNF234, zinc finger protein 234, [Score=161, Expect=6e-42]} {Mouse: ENSMUSG00000074867, Zfp808, zinc finger protein 808, [Score=159, Expect=3e-41]; ENSMUSG00000090015, Gm15446, predicted gene 15446, [Score=156, Expect=5e-41]; ENSMUSG00000095432, Zfp748, zinc finger protein 748, [Score=154, Expect=3e-39]} {Dmel: FBgn0266450, Kr-h1, Kruppel homolog 1, [Score=116, Expect=4e-27]} {Celegans: WBGene00003847, blmp-1, B lymphocyte-induced maturation protein 1 homolog, [Score=110, Expect=2e-25]} {Smed: dd_Smed_v6_9867_0_1, dd_Smed_v6_9867_0_1, [Score=98.6, Expect=3e-22]} {RNA1509_58493} {RNA1310_22371} {RNA815_28539}
6. MligTC455_51800 518 10.79 Mlig455_041708

Neo: -

Age: Up-Down-Down

YME1L1 1.667 - - - 0.711 0.956 - Mlig455_041708 {REF} {Length: 5534} {TRANSSPLICED} {Pfam: Peptidase family M41 [PF01434.20, score=176.9]; ATPase family associated with various cellular activities (AAA) [PF00004.31, score=143.1]; AAA+ lid domain [PF17862.3, score=25.9]; AAA ATPase domain [PF13191.8, score=24.7]; AAA domain [PF13401.8, score=22.7]; Holliday junction DNA helicase RuvB P-loop domain [PF05496.14, score=21.7]; AAA domain (dynein-related subfamily) [PF07728.16, score=21.7]; TIP49 P-loop domain [PF06068.15, score=17.9]} {Human: ENSG00000136758, YME1L1, YME1 like 1 ATPase, [RH, Score=462, Expect=2e-152]} {Mouse: ENSMUSG00000026775, Yme1l1, YME1-like 1 (S. cerevisiae), [RH, Score=460, Expect=2e-151]} {Dmel: FBgn0034792, YME1L, YME1 like ATPase, [RH, Score=484, Expect=2e-160]} {Celegans: WBGene00010842, ymel-1, ATP-dependent zinc metalloprotease YME1 homolog, [RH, Score=471, Expect=9e-156]} {Smed: dd_Smed_v6_962_0_1, dd_Smed_v6_962_0_1, [RH, Score=446, Expect=9e-147]} {RNA1509_45054, RNA1509_7847} {RNA1310_2453.1, RNA1509_45054, RNA1509_7847} {RNA1509_45054, RNA1509_7847, RNA815_3285}
7. MligTC455_41161 1723 35.89 Mlig455_015003, Mlig455_038650

Neo: -

Age: -

Regeneration-upregulated R6: 1.721

Regeneration-enriched R6: 1.721

RBBP6 0.978 - - - - 0.978 -

Mlig455_015003 {REF} {Length: 3795} {TRANSSPLICED} {Pfam: DWNN domain [PF08783.13, score=49.8]; U-box domain [PF04564.17, score=27.2]; Zinc finger, C3HC4 type (RING finger) [PF13923.8, score=20.9]; Ring finger domain [PF13639.8, score=20.2]} {Human: ENSG00000122257, RBBP6, RB binding protein 6, ubiquitin ligase, [Score=78.2, Expect=7e-14]} {Mouse: ENSMUSG00000030779, Rbbp6, retinoblastoma binding protein 6, ubiquitin ligase, [Score=78.2, Expect=5e-14]} {Dmel: FBgn0086129, snama, something that sticks like glue, [Score=96.3, Expect=9e-20]} {Celegans: WBGene00009477, rbpl-1, Retinoblastoma Binding Protein Like, [Score=61.6, Expect=3e-09]} {Smed: dd_Smed_v6_6556_0_1, dd_Smed_v6_6556_0_1, [Score=80.1, Expect=3e-15]} {RNA1509_48313, RNA1509_5537} {RNA1310_2775, RNA1509_48313} {RNA1509_48313, RNA815_5708}

Mlig455_038650 {REF} {Length: 3834} {TRANSSPLICED} {Pfam: DWNN domain [PF08783.13, score=49.8]; U-box domain [PF04564.17, score=28.5]; Zinc finger, C3HC4 type (RING finger) [PF13923.8, score=21.8]; Ring finger domain [PF13639.8, score=21.3]} {Human: ENSG00000122257, RBBP6, RB binding protein 6, ubiquitin ligase, [Score=80.9, Expect=1e-14]} {Mouse: ENSMUSG00000030779, Rbbp6, retinoblastoma binding protein 6, ubiquitin ligase, [Score=80.5, Expect=9e-15]} {Dmel: FBgn0086129, snama, something that sticks like glue, [Score=91.3, Expect=3e-18]} {Celegans: WBGene00009477, rbpl-1, Retinoblastoma Binding Protein Like, [Score=62.0, Expect=2e-09]} {Smed: dd_Smed_v6_6556_0_1, dd_Smed_v6_6556_0_1, [RH, Score=85.9, Expect=4e-17]} {RNA1509_5537} {RNA1310_2775} {RNA815_5708}
8. MligTC455_50548 651 13.56 Mlig455_039553, Mlig455_051358

Neo: -

Age: logFC(26M/2M)=0.261

MRI1 0.966 - - - - 0.966 -

Mlig455_039553 {REF} {Length: 2475} {TRANSSPLICED} {Pfam: Initiation factor 2 subunit family [PF01008.19, score=256.7]} {Human: ENSG00000037757, MRI1, methylthioribose-1-phosphate isomerase 1, [RH, Score=364, Expect=2e-124]} {Mouse: ENSMUSG00000004996, Mri1, methylthioribose-1-phosphate isomerase 1, [RH, Score=355, Expect=5e-121]} {Dmel: FBgn0039849, CG11334, [RH, Score=379, Expect=1e-130]} {Celegans: WBGene00007236, C01G10.9, Methylthioribose-1-phosphate isomerase, [RH, Score=268, Expect=3e-87]} {RNA1509_13437, RNA1509_22125} {RNA1310_17445.2, RNA1509_22125} {RNA1509_22125, RNA815_10627.1}

Mlig455_051358 {REF} {Length: 2101} {TRANSSPLICED} {Pfam: Initiation factor 2 subunit family [PF01008.19, score=257.4]} {Human: ENSG00000037757, MRI1, methylthioribose-1-phosphate isomerase 1, [RH, Score=367, Expect=1e-125]} {Mouse: ENSMUSG00000004996, Mri1, methylthioribose-1-phosphate isomerase 1, [RH, Score=358, Expect=4e-122]} {Dmel: FBgn0039849, CG11334, [RH, Score=380, Expect=3e-131]} {Celegans: WBGene00007236, C01G10.9, Methylthioribose-1-phosphate isomerase, [RH, Score=270, Expect=6e-88]} {RNA1509_13437} {RNA1310_17445.2, RNA1509_13437} {RNA1509_13437, RNA815_10627.1}
9. MligTC455_47142 2593 54.02 Mlig455_059877

Neo: Int S/G2/M

Age: logFC(26M/2M)=0.824

PDAP1 0.963 - - - - 0.963 - Mlig455_059877 {REF} {Length: 1959} {Pfam: Casein kinase substrate phosphoprotein PP28 [PF10252.11, score=83.4]} {Human: ENSG00000106244, PDAP1, PDGFA associated protein 1, [RH, Score=80.1, Expect=3e-18]} {Mouse: ENSMUSG00000029623, Pdap1, PDGFA associated protein 1, [RH, Score=79.7, Expect=3e-18]} {Dmel: FBgn0029715, CG11444, [RH, Score=79.3, Expect=5e-18]} {RNA1509_25576} {RNA1310_18665} {RNA815_8373.1}
10. MligTC455_44605 224 4.67 Mlig455_031237

Neo: -

Age: -

Region-enriched R5: 1.873/0.02978

CHRNA9 0.956 - - - - 0.956 - Mlig455_031237 {REF} {Length: 4257} {Pfam: Neurotransmitter-gated ion-channel ligand binding domain [PF02931.25, score=144.1]; Neurotransmitter-gated ion-channel transmembrane region [PF02932.18, score=113.8]} {Human: ENSG00000174343, CHRNA9, cholinergic receptor nicotinic alpha 9 subunit, [Score=211, Expect=8e-61]; ENSG00000120903, CHRNA2, cholinergic receptor nicotinic alpha 2 subunit, [Score=201, Expect=2e-56]; ENSG00000147432, CHRNB3, cholinergic receptor nicotinic beta 3 subunit, [Score=201, Expect=3e-57]} {Mouse: ENSMUSG00000029205, Chrna9, cholinergic receptor, nicotinic, alpha polypeptide 9, [Score=214, Expect=3e-62]} {Dmel: FBgn0000038, nAChRbeta1, nicotinic Acetylcholine Receptor beta1, [Score=196, Expect=2e-55]} {Celegans: WBGene00000050, acr-11, AcetylCholine Receptor, [Score=187, Expect=2e-52]} {Smed: dd_Smed_v6_10322_0_1, dd_Smed_v6_10322_0_1, [RH, Score=446, Expect=2e-150]} {RNA1509_46245} {RNA1310_16441} {RNA815_17572}
11. MligTC455_16286 1029 21.44 Mlig455_067405, Mlig455_069542

Neo: -

Age: -

CSRNP2 0.954 - - - - 0.954 -

Mlig455_067405 {REF} {Length: 1792} {TRANSSPLICED} {Pfam: Cysteine/serine-rich nuclear protein N-terminus [PF16019.7, score=168.5]} {Human: ENSG00000110925, CSRNP2, cysteine and serine rich nuclear protein 2, [RH, Score=139, Expect=1e-35]} {Mouse: ENSMUSG00000044636, Csrnp2, cysteine-serine-rich nuclear protein 2, [RH, Score=139, Expect=9e-36]} {Dmel: FBgn0261647, Axud1, AXIN1 up-regulated 1, [RH, Score=149, Expect=1e-38]} {Smed: dd_Smed_v6_9797_0_1, dd_Smed_v6_9797_0_1, [RH, Score=149, Expect=6e-39]} {RNA1509_21091} {RNA1310_24252} {RNA815_13620.1}

Mlig455_069542 {REF} {Length: 1793} {TRANSSPLICED} {Pfam: Cysteine/serine-rich nuclear protein N-terminus [PF16019.7, score=168.6]} {Human: ENSG00000110925, CSRNP2, cysteine and serine rich nuclear protein 2, [RH, Score=139, Expect=8e-36]} {Mouse: ENSMUSG00000044636, Csrnp2, cysteine-serine-rich nuclear protein 2, [RH, Score=139, Expect=5e-36]} {Dmel: FBgn0261647, Axud1, AXIN1 up-regulated 1, [RH, Score=149, Expect=6e-39]} {Smed: dd_Smed_v6_9797_0_1, dd_Smed_v6_9797_0_1, [RH, Score=149, Expect=3e-39]} {RNA1509_21091} {RNA1310_24252} {RNA815_13620.1}
12. MligTC455_19609 1426 29.71 Mlig455_060191

Neo: Int S/G2/M

Age: Down-Up-Up

FKBP2 0.954 - - - - 0.954 - Mlig455_060191 {REF} {Length: 884} {TRANSSPLICED} {Pfam: FKBP-type peptidyl-prolyl cis-trans isomerase [PF00254.30, score=114.1]} {Human: ENSG00000173486, FKBP2, FK506 binding protein 2, [Score=111, Expect=3e-31]} {Mouse: ENSMUSG00000003355, Fkbp11, FK506 binding protein 11, [RH, Score=107, Expect=3e-29]} {Dmel: FBgn0010470, Fkbp14, FK506-binding protein 14, [Score=122, Expect=6e-35]} {Celegans: WBGene00001426, fkb-1, Peptidylprolyl isomerase, [Score=110, Expect=3e-31]} {Smed: dd_Smed_v6_1536_0_1, dd_Smed_v6_1536_0_1, [Score=108, Expect=1e-30]} {RNA1509_12957, RNA1509_42438} {RNA1310_37809.1, RNA1509_12957, RNA1509_42438} {RNA1509_12957, RNA1509_42438, RNA815_19606}
13. MligTC455_50922 765 15.94 Mlig455_025280

Neo: -

Age: Down-Down-Down, logFC(26M/2M)=-1.985

NELFE 0.954 - - - - 0.954 - Mlig455_025280 {REF} {Length: 1330} {TRANSSPLICED} {Pfam: RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) [PF00076.24, score=42.4]} {Human: ENSG00000206268, NELFE, negative elongation factor complex member E, [Score=60.1, Expect=2e-09]; ENSG00000204356, NELFE, negative elongation factor complex member E, [Score=60.1, Expect=2e-09]; ENSG00000231044, NELFE, negative elongation factor complex member E, [Score=60.1, Expect=2e-09]; ENSG00000206357, NELFE, negative elongation factor complex member E, [Score=60.1, Expect=2e-09]; ENSG00000229363, NELFE, negative elongation factor complex member E, [Score=60.1, Expect=2e-09]; ENSG00000233801, NELFE, negative elongation factor complex member E, [Score=60.1, Expect=2e-09]} {Mouse: ENSMUSG00000024369, Nelfe, negative elongation factor complex member E, Rdbp, [Score=60.5, Expect=1e-09]} {RNA1509_13692} {RNA1310_22114} {RNA815_11055}
14. MligTC455_50923 766 15.95 Mlig455_025309

Neo: -

Age: -

NELFE 0.954 - - - - 0.954 - Mlig455_025309 {REF} {Length: 1328} {TRANSSPLICED} {Pfam: RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) [PF00076.24, score=42.4]} {Human: ENSG00000206268, NELFE, negative elongation factor complex member E, [Score=60.1, Expect=2e-09]; ENSG00000229363, NELFE, negative elongation factor complex member E, [Score=60.1, Expect=2e-09]; ENSG00000204356, NELFE, negative elongation factor complex member E, [Score=60.1, Expect=2e-09]; ENSG00000231044, NELFE, negative elongation factor complex member E, [Score=60.1, Expect=2e-09]; ENSG00000206357, NELFE, negative elongation factor complex member E, [Score=60.1, Expect=2e-09]; ENSG00000233801, NELFE, negative elongation factor complex member E, [Score=60.1, Expect=2e-09]} {Mouse: ENSMUSG00000024369, Nelfe, negative elongation factor complex member E, Rdbp, [Score=60.5, Expect=1e-09]} {RNA1509_13692, RNA1509_30004} {RNA1310_22114, RNA1509_13692, RNA1509_30004} {RNA1509_13692, RNA1509_30004, RNA815_11055}
15. MligTC455_20704 143 2.98 Mlig455_053900

Neo: -

Age: Up-Up-Up, logFC(26M/2M)=0.878

Region-enriched R5: 1.814/0.00667

HYI 0.952 - - - - 0.952 - Mlig455_053900 {REF} {Length: 1615} {TRANSSPLICED} {Pfam: Xylose isomerase-like TIM barrel [PF01261.26, score=93.1]} {Human: ENSG00000178922, HYI, hydroxypyruvate isomerase (putative), [RH, Score=147, Expect=2e-43]} {Mouse: ENSMUSG00000006395, Hyi, hydroxypyruvate isomerase (putative), [Score=129, Expect=3e-36]} {Dmel: FBgn0011770, Gip, GIP-like, [Score=127, Expect=7e-36]} {Celegans: WBGene00015483, C05D11.5, Putative hydroxypyruvate isomerase, [Score=106, Expect=8e-28]} {RNA1509_30305} {RNA1310_19033} {RNA815_22792}
16. MligTC455_37707 171 3.57 Mlig455_044283

Neo: -

Age: Down-Down-Up

0.95 - - - - 0.950 - Mlig455_044283 {REF} {Length: 1689} {NoTransDecoderORF} {RNA1310_12774.2} {RNA815_37521}

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