Data search
Results for MligTC455_47707
| Cluster | Total UMI counts | Global CPM | Transcripts | Categories | Human homolog | Annotation |
|---|---|---|---|---|---|---|
| MligTC455_47707 | 325 | 6.78 | Mlig455_067545 | Neo: - Age: - |
VEPH1 | Mlig455_067545 {REF} {Length: 4743} {TRANSSPLICED} {Human: ENSG00000197415, VEPH1, ventricular zone expressed PH domain containing 1, [RH, Score=105, Expect=1e-22]} {Mouse: ENSMUSG00000027831, Veph1, ventricular zone expressed PH domain-containing 1, [RH, Score=98.2, Expect=2e-20]} {Dmel: FBgn0023001, melt, melted, [RH, Score=97.8, Expect=2e-20]} {Celegans: WBGene00019615, K10B4.3, Protein melted homolog, [RH, Score=101, Expect=9e-22]} {RNA1509_27116} {RNA1310_3335.2, RNA1509_27116} {RNA1509_27116, RNA815_7388} |
Cumulative graph for MligTC455_47707
Region-enriched expression
| Region | logFC | logCPM | Pvalue | FDR | Specificity |
|---|---|---|---|---|---|
| RegionR1 | 0.785 | 3.176 | 0.53070 | 1.00000 | |
| RegionR2 | -0.22 | 3.176 | 0.69959 | 1.00000 | |
| RegionR3 | -0.315 | 3.176 | 0.49543 | 0.99178 | |
| RegionR4 | -0.103 | 3.176 | 0.85707 | 1.00000 | |
| RegionR5 | -0.032 | 3.176 | 0.93529 | 1.00000 | |
| RegionR6 | -0.121 | 3.176 | 0.79752 | 1.00000 | |
| RegionR7 | -0.556 | 3.176 | 0.42389 | 1.00000 | |
| RegionR8 | 0.561 | 3.176 | 0.46051 | 1.00000 |
Regeneration-enriched expression
| Region | logFC | logCPM | PValue | FDR | Specificity |
|---|---|---|---|---|---|
| RegenerationR1 | -1.352 | 3.176 | 0.45260 | 1.00000 | |
| RegenerationR2 | 0.311 | 3.176 | 0.48942 | 0.86753 | |
| RegenerationR3 | -0.349 | 3.176 | 0.50695 | 0.85934 | |
| RegenerationR4 | -0.434 | 3.176 | 0.42215 | 0.82647 | |
| RegenerationR5 | -0.705 | 3.176 | 0.14070 | 0.55365 | |
| RegenerationR6 | -0.328 | 3.176 | 0.54233 | 0.83411 | |
| RegenerationBL | -0.883 | 3.176 | 0.22001 | 0.56712 | |
| RegenerationTP | -0.613 | 3.176 | 0.41898 | 0.84340 |
Genes with expression patterns similar to MligTC455_47707
| Nr. | Cluster | Total UMI counts | Global CPM | Transcripts | Categories | Human homolog | Σ Spearman correlations | Int1 | Int2 | Int3 | Reg1 | Reg2 | Reg3 | Annotation |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1. | MligTC455_47707 | 325 | 6.78 | Mlig455_067545 | Neo: - Age: - |
VEPH1 | 6 | 1.000 | 1.000 | 1.000 | 1.000 | 1.000 | 1.000 | Mlig455_067545 {REF} {Length: 4743} {TRANSSPLICED} {Human: ENSG00000197415, VEPH1, ventricular zone expressed PH domain containing 1, [RH, Score=105, Expect=1e-22]} {Mouse: ENSMUSG00000027831, Veph1, ventricular zone expressed PH domain-containing 1, [RH, Score=98.2, Expect=2e-20]} {Dmel: FBgn0023001, melt, melted, [RH, Score=97.8, Expect=2e-20]} {Celegans: WBGene00019615, K10B4.3, Protein melted homolog, [RH, Score=101, Expect=9e-22]} {RNA1509_27116} {RNA1310_3335.2, RNA1509_27116} {RNA1509_27116, RNA815_7388} |
| 2. | MligTC455_23747 | 911 | 18.99 | Mlig455_029661 | Neo: - Age: - Region-enriched R8: 1.483/0.03070 |
RYR2 | 1.653 | - | - | 0.702 | - | - | 0.951 | Mlig455_029661 {REF} {Length: 16009} {Pfam: RIH domain [PF01365.23, score=380.6]; RyR domain [PF02026.18, score=278.1]; Inositol 1,4,5-trisphosphate/ryanodine receptor [PF08709.13, score=160.6]; SPRY domain [PF00622.30, score=160.1]; MIR domain [PF02815.21, score=149.6]; Ryanodine Receptor TM 4-6 [PF06459.14, score=119.4]; RyR and IP3R Homology associated [PF08454.13, score=108.6]; Ion transport protein [PF00520.33, score=45.5]; EF hand [PF00036.34, score=43.1]; EF-hand domain pair [PF13499.8, score=39.4]; EF hand [PF13202.8, score=36.6]; EF-hand domain pair [PF13833.8, score=34.5]; EF-hand domain [PF13405.8, score=25.2]} {Human: ENSG00000198626, RYR2, ryanodine receptor 2, [RH, Score=3262, Expect=0.0]} {Mouse: ENSMUSG00000021313, Ryr2, ryanodine receptor 2, cardiac, [RH, Score=3244, Expect=0.0]} {Dmel: FBgn0011286, RyR, Ryanodine receptor, [RH, Score=2369, Expect=0.0]} {Celegans: WBGene00006801, unc-68, [RH, Score=1419, Expect=0.0]} {Smed: dd_Smed_v6_5582_0_1, dd_Smed_v6_5582_0_1, [RH, Score=4415, Expect=0.0]} {RNA1509_827} {RNA1310_30.1} {RNA815_76.1} |
| 3. | MligTC455_24026 | 610 | 12.71 | Mlig455_006439 | Neo: - |
DMBT1 | 0.967 | - | - | - | - | - | 0.967 | Mlig455_006439 {REF} {Length: 2543} {Pfam: Zona pellucida-like domain [PF00100.25, score=88.4]; Scavenger receptor cysteine-rich domain [PF00530.20, score=66.6]} {Human: ENSG00000187908, DMBT1, deleted in malignant brain tumors 1, [Score=62.0, Expect=3e-09]} {Smed: dd_Smed_v6_8185_0_1, dd_Smed_v6_8185_0_1, [RH, Score=78.6, Expect=3e-15]} {RNA1509_6352} {RNA1310_8273} {RNA815_2734} |
| 4. | MligTC455_37115 | 143 | 2.97 | Mlig455_020761 | Neo: - Age: - |
CA10 | 0.96 | 0.960 | - | - | - | - | - | Mlig455_020761 {REF} {Length: 2633} {Pfam: Eukaryotic-type carbonic anhydrase [PF00194.23, score=197.9]} {Human: ENSG00000154975, CA10, carbonic anhydrase 10, [RH, Score=193, Expect=1e-58]} {Mouse: ENSMUSG00000056158, Car10, carbonic anhydrase 10, [RH, Score=193, Expect=8e-59]} {Dmel: FBgn0029962, CG1402, [RH, Score=196, Expect=6e-60]} {Celegans: WBGene00000279, cah-1, Carbonic AnHydrase, [RH, Score=178, Expect=1e-53]} {Smed: dd_Smed_v6_15243_0_1, dd_Smed_v6_15243_0_1, [RH, Score=296, Expect=2e-99]} {RNA1509_19317} {RNA1310_15609, RNA1509_19317} {RNA1509_19317, RNA815_6866} |
| 5. | MligTC455_34364 | 572 | 11.92 | Mlig455_033652 | Neo: - Age: Up-Up-Down |
0.954 | - | - | 0.954 | - | - | - | Mlig455_033652 {REF} {Length: 1805} {NoTransDecoderORF} {RNA1509_33860} {RNA1310_19318, RNA1509_33860} {RNA1509_33860, RNA815_15100} | |
| 6. | MligTC455_48340 | 430 | 8.96 | Mlig455_002900 | Neo: - Age: logFC(26M/2M)=-0.249 |
WDR35 | 0.954 | - | - | - | - | - | 0.954 | Mlig455_002900 {REF} {Length: 6606} {Pfam: Anaphase-promoting complex subunit 4 WD40 domain [PF12894.9, score=49.9]; Coatomer WD associated region [PF04053.16, score=34.9]; WD domain, G-beta repeat [PF00400.34, score=34.1]; Tetratricopeptide repeat [PF13432.8, score=25.9]; Region in Clathrin and VPS [PF00637.22, score=20.0]} {Human: ENSG00000118965, WDR35, WD repeat domain 35, [RH, Score=1335, Expect=0.0]} {Mouse: ENSMUSG00000066643, Wdr35, WD repeat domain 35, [RH, Score=1320, Expect=0.0]} {Dmel: FBgn0035264, Oseg4, Outer segment 4, [RH, Score=974, Expect=0.0]} {Celegans: WBGene00016935, ifta-1, IntraFlagellar Transport Associated, [RH, Score=429, Expect=3e-130]} {Smed: dd_Smed_v6_9653_0_1, dd_Smed_v6_9653_0_1, [RH, Score=1130, Expect=0.0]} {RNA1509_3921} {RNA1310_2649.1, RNA1509_3921} {RNA1509_3921, RNA815_761.1} |
| 7. | MligTC455_15349 | 404 | 8.41 | Mlig455_026642 | Neo: - Age: logFC(26M/2M)=-0.377 |
0.953 | - | - | - | - | - | 0.953 | Mlig455_026642 {REF} {Length: 3114} {Pfam: EF-hand domain [PF13405.8, score=70.7]; EF-hand domain pair [PF13499.8, score=54.9]; EF hand [PF00036.34, score=48.7]; EF-hand domain pair [PF13833.8, score=33.4]; EF-hand domain [PF08976.13, score=22.0]} {Dmel: FBgn0038163, CG10841, [RH, Score=209, Expect=1e-56]} {Smed: dd_Smed_v6_8441_0_1, dd_Smed_v6_8441_0_1, [RH, Score=828, Expect=0.0]} {RNA1509_4624} {RNA1310_4455} {RNA815_1290} | |
| 8. | MligTC455_49000 | 898 | 18.71 | Mlig455_028056 | Neo: - Age: - |
0.953 | - | - | 0.953 | - | - | - | Mlig455_028056 {REF} {Length: 2593} {TRANSSPLICED} {Pfam: Mannose-6-phosphate receptor [PF02157.17, score=103.6]} {Smed: dd_Smed_v6_1365_0_1, dd_Smed_v6_1365_0_1, [RH, Score=87.0, Expect=9e-20]} {RNA1509_15515, RNA1509_53336} {RNA1310_10995, RNA1509_15515, RNA1509_53336} {RNA1509_15515, RNA1509_53336, RNA815_12272} | |
| 9. | MligTC455_15267 | 527 | 10.97 | Mlig455_038934 | Neo: - Age: - |
0.95 | - | - | - | - | - | 0.950 | Mlig455_038934 {REF} {Length: 4442} {TRANSSPLICED} {Pfam: ALMS motif [PF15309.8, score=45.3]} {Smed: dd_Smed_v6_5064_0_1, dd_Smed_v6_5064_0_1, [Score=85.9, Expect=6e-17]} {RNA1509_20372, RNA1509_29169, RNA1509_51896, RNA1509_52383} {RNA1310_3943.1, RNA1509_20372, RNA1509_29169, RNA1509_51896, RNA1509_52383} {RNA1509_20372, RNA1509_29169, RNA1509_51896, RNA1509_52383, RNA815_11083} |
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