Data search
Results for MligTC455_47958
| Cluster | Total UMI counts | Global CPM | Transcripts | Categories | Human homolog | Annotation |
|---|---|---|---|---|---|---|
| MligTC455_47958 | 1557 | 32.44 | Mlig455_006488 | Neo: - Age: - |
TRPT1 | Mlig455_006488 {REF} {Length: 3354} {TRANSSPLICED} {Pfam: RNA 2'-phosphotransferase, Tpt1 / KptA family [PF01885.18, score=227.2]} {Human: ENSG00000149743, TRPT1, tRNA phosphotransferase 1, [RH, Score=187, Expect=9e-58]} {Mouse: ENSMUSG00000047656, Trpt1, tRNA phosphotransferase 1, [RH, Score=176, Expect=1e-53]} {Dmel: FBgn0053057, CG33057, [Score=139, Expect=4e-40]} {Smed: dd_Smed_v6_5292_0_1, dd_Smed_v6_5292_0_1, [RH, Score=179, Expect=8e-55]} {RNA1509_12721, RNA1509_49638} {RNA1310_22579, RNA1509_49638} {RNA1509_49638, RNA815_13471.1} |
Cumulative graph for MligTC455_47958
Region-enriched expression
| Region | logFC | logCPM | Pvalue | FDR | Specificity |
|---|---|---|---|---|---|
| RegionR1 | -1.335 | 5.159 | 0.12602 | 0.72094 | |
| RegionR2 | 0.234 | 5.159 | 0.48860 | 0.87094 | |
| RegionR3 | 0.388 | 5.159 | 0.16369 | 0.68391 | |
| RegionR4 | 0.443 | 5.159 | 0.18275 | 0.45425 | |
| RegionR5 | 0.353 | 5.159 | 0.18569 | 0.46589 | |
| RegionR6 | 0.088 | 5.159 | 0.76592 | 1.00000 | |
| RegionR7 | 0.014 | 5.159 | 0.96827 | 1.00000 | |
| RegionR8 | -0.185 | 5.159 | 0.68925 | 1.00000 |
Regeneration-enriched expression
| Region | logFC | logCPM | PValue | FDR | Specificity |
|---|---|---|---|---|---|
| RegenerationR1 | -0.292 | 5.159 | 0.83357 | 1.00000 | |
| RegenerationR2 | 0.523 | 5.159 | 0.05889 | 0.39947 | |
| RegenerationR3 | -0.136 | 5.159 | 0.66076 | 0.93337 | |
| RegenerationR4 | 0.157 | 5.159 | 0.62031 | 0.92088 | |
| RegenerationR5 | -0.1 | 5.159 | 0.73439 | 0.96552 | |
| RegenerationR6 | 0.003 | 5.159 | 0.99328 | 1.00000 | |
| RegenerationBL | -0.21 | 5.159 | 0.57690 | 0.92974 | |
| RegenerationTP | 0.726 | 5.159 | 0.05316 | 0.37690 |
Genes with expression patterns similar to MligTC455_47958
| Nr. | Cluster | Total UMI counts | Global CPM | Transcripts | Categories | Human homolog | Σ Spearman correlations | Int1 | Int2 | Int3 | Reg1 | Reg2 | Reg3 | Annotation |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1. | MligTC455_47958 | 1557 | 32.44 | Mlig455_006488 | Neo: - Age: - |
TRPT1 | 6 | 1.000 | 1.000 | 1.000 | 1.000 | 1.000 | 1.000 | Mlig455_006488 {REF} {Length: 3354} {TRANSSPLICED} {Pfam: RNA 2'-phosphotransferase, Tpt1 / KptA family [PF01885.18, score=227.2]} {Human: ENSG00000149743, TRPT1, tRNA phosphotransferase 1, [RH, Score=187, Expect=9e-58]} {Mouse: ENSMUSG00000047656, Trpt1, tRNA phosphotransferase 1, [RH, Score=176, Expect=1e-53]} {Dmel: FBgn0053057, CG33057, [Score=139, Expect=4e-40]} {Smed: dd_Smed_v6_5292_0_1, dd_Smed_v6_5292_0_1, [RH, Score=179, Expect=8e-55]} {RNA1509_12721, RNA1509_49638} {RNA1310_22579, RNA1509_49638} {RNA1509_49638, RNA815_13471.1} |
| 2. | MligTC455_48102 | 1320 | 27.5 | Mlig455_006219 | Neo: - Age: logFC(26M/2M)=-0.310 Region-enriched R8: 1.245/0.04204 |
RGS22 | 2.613 | - | - | - | 0.955 | 0.882 | 0.776 | Mlig455_006219 {REF} {Length: 6168} {TRANSSPLICED} {Pfam: Regulator of G protein signaling domain [PF00615.21, score=73.0]} {Human: ENSG00000132554, RGS22, regulator of G protein signaling 22, [RH, Score=69.7, Expect=5e-11]} {Mouse: ENSMUSG00000037627, Rgs22, regulator of G-protein signalling 22, [RH, Score=59.3, Expect=4e-08]} {Smed: dd_Smed_v6_11778_0_1, dd_Smed_v6_11778_0_1, [Score=365, Expect=5e-105]} {RNA1509_2536} {RNA1310_2017.1} {RNA815_616.1} |
| 3. | MligTC455_45394 | 1156 | 24.08 | Mlig455_009723 | Neo: - Age: - |
DLC1 | 1.859 | - | - | 0.902 | - | 0.957 | - | Mlig455_009723 {REF} {Length: 4644} {Pfam: RhoGAP domain [PF00620.29, score=114.0]; START domain [PF01852.21, score=58.1]} {Human: ENSG00000285265, DLC1, DLC1 Rho GTPase activating protein, [Score=337, Expect=8e-99]; ENSG00000164741, DLC1, DLC1 Rho GTPase activating protein, [Score=337, Expect=1e-96]; ENSG00000133121, STARD13, StAR related lipid transfer domain containing 13, [Score=326, Expect=3e-95]} {Mouse: ENSMUSG00000016128, Stard13, StAR-related lipid transfer (START) domain containing 13, [Score=333, Expect=7e-98]; ENSMUSG00000031523, Dlc1, deleted in liver cancer 1, [Score=331, Expect=1e-94]} {Dmel: FBgn0285955, cv-c, crossveinless c, [Score=277, Expect=4e-78]} {Celegans: WBGene00001559, gei-1, GEX Interacting protein, [Score=196, Expect=6e-51]} {Smed: dd_Smed_v6_9530_0_2, dd_Smed_v6_9530_0_2, [Score=305, Expect=1e-88]} {RNA1509_22275, RNA1509_9216} {RNA1310_3779, RNA1509_22275} {RNA1509_22275, RNA815_16531} |
| 4. | MligTC455_32840 | 284 | 5.92 | Mlig455_048602 | Neo: - Age: - |
0.979 | - | - | - | - | 0.979 | - | Mlig455_048602 {REF} {Length: 983} {NoTransDecoderORF} {RNA1509_43402} {RNA1310_54655.2, RNA1509_43402} {RNA1509_43402, RNA815_32429.1} | |
| 5. | MligTC455_39984 | 512 | 10.67 | Mlig455_039849 | Neo: - Age: - |
0.976 | - | - | - | - | 0.976 | - | Mlig455_039849 {REF} {Length: 887} {RNA1509_47643} {RNA1310_53943, RNA1509_47643} {RNA1509_47643, RNA815_31128} | |
| 6. | MligTC455_45889 | 999 | 20.82 | Mlig455_016282 | Neo: - Age: Down-Up-Down Regeneration-downregulated BL: -1.820 Regeneration-depleted BL: -1.820 |
TMEM127 | 0.969 | - | - | - | - | 0.969 | - | Mlig455_016282 {REF} {Length: 2723} {TRANSSPLICED} {Human: ENSG00000135956, TMEM127, transmembrane protein 127, [RH, Score=79.0, Expect=3e-16]} {Mouse: ENSMUSG00000034850, Tmem127, transmembrane protein 127, [RH, Score=80.1, Expect=9e-17]} {RNA1509_11709, RNA1509_44690} {RNA1310_6373.1, RNA1509_11709, RNA1509_44690} {RNA1509_11709, RNA1509_44690, RNA815_4313.1} |
| 7. | MligTC455_49807 | 1833 | 38.18 | Mlig455_070163 | Neo: - Age: Down-Up-Up |
RAC1 | 0.964 | - | - | - | - | 0.964 | - | Mlig455_070163 {REF} {Length: 1370} {Pfam: Ras family [PF00071.24, score=145.4]; Ras of Complex, Roc, domain of DAPkinase [PF08477.15, score=77.9]; ADP-ribosylation factor family [PF00025.23, score=46.0]; Elongation factor Tu GTP binding domain [PF00009.29, score=27.8]} {Human: ENSG00000136238, RAC1, Rac family small GTPase 1, [Score=139, Expect=3e-41]; ENSG00000169750, RAC3, Rac family small GTPase 3, [Score=137, Expect=1e-40]; ENSG00000119729, RHOQ, ras homolog family member Q, [Score=136, Expect=5e-40]; ENSG00000128340, RAC2, Rac family small GTPase 2, [Score=136, Expect=4e-40]; ENSG00000177105, RHOG, ras homolog family member G, [Score=135, Expect=1e-39]; ENSG00000070831, CDC42, cell division cycle 42, [Score=134, Expect=2e-39]; ENSG00000285721, AL031281.2, novel protein, identical to cell division cycle 42 (GTP binding protein, 25kDa) CDC42, [Score=134, Expect=2e-39]} {Mouse: ENSMUSG00000001847, Rac1, Rac family small GTPase 1, [Score=139, Expect=2e-41]; ENSMUSG00000018012, Rac3, Rac family small GTPase 3, [Score=137, Expect=7e-41]; ENSMUSG00000033220, Rac2, Rac family small GTPase 2, [Score=136, Expect=2e-40]; ENSMUSG00000024143, Rhoq, ras homolog family member Q, [Score=136, Expect=4e-40]; ENSMUSG00000073982, Rhog, ras homolog family member G, [Score=135, Expect=7e-40]; ENSMUSG00000006699, Cdc42, cell division cycle 42, [Score=134, Expect=1e-39]} {Dmel: FBgn0010333, Rac1, [Score=135, Expect=2e-40]} {Celegans: WBGene00003239, mig-2, Rac-like GTPase, [Score=144, Expect=1e-43]} {Smed: dd_Smed_v6_913_0_1, dd_Smed_v6_913_0_1, [Score=137, Expect=4e-41]} {RNA1509_14417} {RNA1310_34688.1} {RNA815_20638} |
| 8. | MligTC455_18127 | 401 | 8.35 | Mlig455_023755, Mlig455_023767, Mlig455_023780 | Neo: Irradiation Age: - Region-enriched R4: 2.984/0.01492 |
0.963 | - | - | - | - | 0.963 | - | Mlig455_023755 {REF} {Length: 1717} {RNA1509_40513} {RNA1310_43090} {RNA815_32441} Mlig455_023767 {REF} {Length: 2896} {RNA1509_40513} {RNA1310_43090, RNA1509_40513} {RNA1509_40513, RNA815_32441} Mlig455_023780 {REF} {Length: 2579} {RNA1509_40513} {RNA1310_43090} {RNA815_32441} |
|
| 9. | MligTC455_21813 | 524 | 10.92 | Mlig455_006857 | Neo: - Age: - |
QRICH2 | 0.963 | - | - | - | - | 0.963 | - | Mlig455_006857 {REF} {Length: 4774} {TRANSSPLICED} {Pfam: Domain of unknown function (DUF4795) [PF16043.7, score=162.6]} {Human: ENSG00000129646, QRICH2, glutamine rich 2, [Score=157, Expect=6e-39]} {Mouse: ENSMUSG00000070331, Qrich2, glutamine rich 2, [RH, Score=160, Expect=3e-41]} {Dmel: FBgn0031347, CG10869, [RH, Score=67.0, Expect=4e-11]} {Smed: dd_Smed_v6_6048_0_3, dd_Smed_v6_6048_0_3, [RH, Score=554, Expect=0.0]} {RNA1509_53937, RNA1509_56910} {RNA1310_3031.1, RNA1509_53937} {RNA1509_53937, RNA815_1272.1} |
| 10. | MligTC455_53853 | 563 | 11.74 | Mlig455_016298 | Neo: - Age: logFC(26M/2M)=-0.225 |
KIDINS220 | 0.961 | - | - | - | - | 0.961 | - | Mlig455_016298 {REF} {Length: 5886} {Pfam: Ankyrin repeats (3 copies) [PF12796.9, score=173.0]; Ankyrin repeats (many copies) [PF13857.8, score=78.1]; Ankyrin repeats (many copies) [PF13637.8, score=76.0]; Ankyrin repeat [PF13606.8, score=68.2]; Ankyrin repeat [PF00023.32, score=60.7]; Caspase domain [PF00656.24, score=55.9]; Mab-21 protein [PF03281.16, score=40.6]} {Human: ENSG00000134313, KIDINS220, kinase D interacting substrate 220, [Score=85.1, Expect=9e-16]} {Mouse: ENSMUSG00000036333, Kidins220, kinase D-interacting substrate 220, [Score=84.7, Expect=8e-16]} {Dmel: FBgn0039590, CG10011, [Score=74.7, Expect=6e-13]} {Celegans: WBGene00006490, kdin-1, KiDINs220 (Vertebrate scaffold protein) homolog, [Score=81.6, Expect=3e-15]} {Smed: dd_Smed_v6_7067_0_1, dd_Smed_v6_7067_0_1, [Score=68.9, Expect=2e-11]} {RNA1509_59871, RNA1509_7214} {RNA1310_1541, RNA1509_59871, RNA1509_7214} {RNA1509_59871, RNA1509_7214, RNA815_372} |
| 11. | MligTC455_20880 | 444 | 9.25 | Mlig455_025461 | Neo: - Age: Up-Up-Down |
B4GALT1 | 0.959 | - | - | - | - | 0.959 | - | Mlig455_025461 {REF} {Length: 5145} {TRANSSPLICED} {Pfam: N-terminal region of glycosyl transferase group 7 [PF13733.8, score=155.9]; N-terminal domain of galactosyltransferase [PF02709.16, score=103.1]} {Human: ENSG00000086062, B4GALT1, beta-1,4-galactosyltransferase 1, [RH, Score=266, Expect=4e-85]; ENSG00000117411, B4GALT2, beta-1,4-galactosyltransferase 2, [RH, Score=265, Expect=6e-85]} {Mouse: ENSMUSG00000028413, B4galt1, UDP-Gal:betaGlcNAc beta 1,4- galactosyltransferase, polypeptide 1, [RH, Score=268, Expect=3e-86]; ENSMUSG00000028541, B4galt2, UDP-Gal:betaGlcNAc beta 1,4- galactosyltransferase, polypeptide 2, [RH, Score=265, Expect=5e-85]} {Dmel: FBgn0027538, beta4GalNAcTA, [RH, Score=259, Expect=1e-82]} {Celegans: WBGene00000269, bre-4, Beta-1,4-N-acetylgalactosaminyltransferase bre-4, [RH, Score=282, Expect=4e-92]} {Smed: dd_Smed_v6_12436_0_1, dd_Smed_v6_12436_0_1, [RH, Score=271, Expect=2e-88]} {RNA1509_19176} {RNA1310_18451, RNA1509_19176} {RNA1509_19176, RNA815_8932} |
| 12. | MligTC455_28121 | 122 | 2.54 | Mlig455_003280 | Neo: - Age: - |
0.956 | - | - | - | - | 0.956 | - | Mlig455_003280 {REF} {Length: 2786} {RNA1509_13222} {RNA1310_34828.2} {RNA815_11419.1} | |
| 13. | MligTC455_37691 | 84 | 1.76 | Mlig455_050364 | Neo: - Age: - |
0.954 | - | - | - | - | 0.954 | - | Mlig455_050364 {REF} {Length: 832} {NoTransDecoderORF} {RNA1509_44223} {RNA1310_54802} {RNA815_64986} | |
| 14. | MligTC455_32989 | 739 | 15.4 | Mlig455_006552, Mlig455_006714 | Neo: - Age: - |
SUN2 | 0.953 | - | - | - | - | 0.953 | - | Mlig455_006552 {REF} {Length: 7570} {Pfam: Sad1 / UNC-like C-terminal [PF07738.15, score=112.3]; FlxA-like protein [PF14282.8, score=18.8]} {Human: ENSG00000100242, SUN2, Sad1 and UNC84 domain containing 2, [RH, Score=161, Expect=7e-40]; ENSG00000164828, SUN1, Sad1 and UNC84 domain containing 1, [RH, Score=153, Expect=3e-37]} {Mouse: ENSMUSG00000042524, Sun2, Sad1 and UNC84 domain containing 2, [RH, Score=159, Expect=1e-39]; ENSMUSG00000036817, Sun1, Sad1 and UNC84 domain containing 1, [RH, Score=155, Expect=5e-38]} {Dmel: FBgn0265003, koi, klaroid, [RH, Score=164, Expect=1e-40]} {Celegans: WBGene00006816, unc-84, Nuclear migration and anchoring protein unc-84, [Score=94.7, Expect=4e-19]} {Smed: dd_Smed_v6_10787_0_1, dd_Smed_v6_10787_0_1, [RH, Score=156, Expect=2e-38]} {RNA1509_55860, RNA1509_8110} {RNA1310_366.1, RNA1509_55860} {RNA1509_55860, RNA815_216} Mlig455_006714 {REF} {Length: 7363} {TRANSSPLICED} {Pfam: Sad1 / UNC-like C-terminal [PF07738.15, score=110.8]} {Human: ENSG00000100242, SUN2, Sad1 and UNC84 domain containing 2, [RH, Score=163, Expect=1e-40]} {Mouse: ENSMUSG00000042524, Sun2, Sad1 and UNC84 domain containing 2, [RH, Score=162, Expect=2e-40]; ENSMUSG00000036817, Sun1, Sad1 and UNC84 domain containing 1, [RH, Score=155, Expect=3e-38]} {Dmel: FBgn0265003, koi, klaroid, [RH, Score=166, Expect=3e-41]} {Celegans: WBGene00006816, unc-84, Nuclear migration and anchoring protein unc-84, [Score=93.6, Expect=8e-19]} {Smed: dd_Smed_v6_10787_0_1, dd_Smed_v6_10787_0_1, [RH, Score=156, Expect=2e-38]} {RNA1509_25049, RNA1509_31487} {RNA1310_366.1, RNA1509_25049} {RNA1509_25049, RNA815_216} |
| 15. | MligTC455_22714 | 401 | 8.36 | Mlig455_023345 | Neo: - Age: Down-Up-Down |
0.952 | - | - | - | - | 0.952 | - | Mlig455_023345 {REF} {Length: 3876} {RNA1509_17376, RNA1509_31558} {RNA1310_6954, RNA1509_17376, RNA1509_31558} {RNA1509_17376, RNA1509_31558, RNA815_8376.1} | |
| 16. | MligTC455_26260 | 281 | 5.86 | Mlig455_033712 | Neo: - Age: Up-Down-Down |
0.952 | - | - | - | - | 0.952 | - | Mlig455_033712 {REF} {Length: 4818} {Pfam: Bacterial transferase hexapeptide (six repeats) [PF00132.26, score=21.8]} {RNA1509_26340} {RNA1310_17276.1} {RNA815_2054.1} | |
| 17. | MligTC455_47199 | 2226 | 46.38 | Mlig455_027640 | Neo: - |
CALML5 | 0.952 | - | - | - | - | 0.952 | - | Mlig455_027640 {REF} {Length: 1108} {Pfam: EF-hand domain pair [PF13499.8, score=87.5]; EF hand [PF00036.34, score=83.6]; EF-hand domain [PF13405.8, score=76.4]; EF hand [PF13202.8, score=70.4]; EF-hand domain pair [PF13833.8, score=44.4]; Secreted protein acidic and rich in cysteine Ca binding region [PF10591.11, score=30.0]; EF-hand domain [PF14658.8, score=21.6]; Dockerin type I domain [PF00404.20, score=21.2]} {Human: ENSG00000178372, CALML5, calmodulin like 5, [Score=63.2, Expect=7e-13]} {Mouse: ENSMUSG00000063130, Calml3, calmodulin-like 3, [Score=55.8, Expect=3e-10]} {Dmel: FBgn0000253, Cam, Calmodulin, [Score=57.4, Expect=5e-11]} {Celegans: WBGene00017394, cal-8, CALmodulin related genes, [Score=67.8, Expect=4e-15]} {Smed: dd_Smed_v6_5204_0_1, dd_Smed_v6_5204_0_1, [RH, Score=118, Expect=6e-35]} {RNA1509_5257} {RNA1310_35147} {RNA815_17506} |
| 18. | MligTC455_23866 | 384 | 8.01 | Mlig455_002342 | Neo: - Age: Down-Up-Up, logFC(26M/2M)=0.442 Region-enriched R5: 1.898/0.04942 |
MARS2 | 0.95 | - | - | - | - | 0.950 | - | Mlig455_002342 {REF} {Length: 2569} {TRANSSPLICED} {Pfam: tRNA synthetases class I (M) [PF09334.13, score=211.4]; tRNA synthetases class I (I, L, M and V) [PF00133.24, score=33.0]; Anticodon binding domain of methionyl tRNA ligase [PF19303.1, score=19.0]} {Human: ENSG00000247626, MARS2, methionyl-tRNA synthetase 2, mitochondrial, [Score=301, Expect=7e-95]} {Mouse: ENSMUSG00000046994, Mars2, methionine-tRNA synthetase 2 (mitochondrial), [Score=291, Expect=2e-91]} {Dmel: FBgn0027083, MetRS-m, Methionyl-tRNA synthetase, mitochondrial, [Score=310, Expect=6e-99]} {Celegans: WBGene00013678, Y105E8A.20, Methionyl-tRNA synthetase (Mitochondrial), [Score=291, Expect=3e-92]} {Smed: dd_Smed_v6_12525_0_2, dd_Smed_v6_12525_0_2, [Score=276, Expect=1e-86]} {RNA1509_34702} {RNA1310_17351} {RNA815_6878} |
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