Data search


search
Exact
Search

Results for MligTC455_47984

Cluster Total UMI counts Global CPM Transcripts Categories Human homolog Annotation
MligTC455_47984 3 0.07 Mlig455_069620, Mlig455_069621

Neo: -

Age: -

KREMEN1, WSCD2

Mlig455_069620 {REF} {Length: 778} {Pfam: WSC domain [PF01822.21, score=54.6]} {Human: ENSG00000183762, KREMEN1, kringle containing transmembrane protein 1, [Score=54.7, Expect=5e-09]} {Mouse: ENSMUSG00000020393, Kremen1, kringle containing transmembrane protein 1, [Score=55.8, Expect=1e-09]; ENSMUSG00000020811, Wscd1, WSC domain containing 1, [Score=53.1, Expect=1e-08]} {RNA1509_46267} {RNA1310_43993} {RNA815_32275.1}

Mlig455_069621 {REF} {Length: 878} {Pfam: WSC domain [PF01822.21, score=51.4]; PAN domain [PF00024.28, score=24.6]} {Human: ENSG00000075035, WSCD2, WSC domain containing 2, [Score=53.9, Expect=7e-08]} {Mouse: ENSMUSG00000063430, Wscd2, WSC domain containing 2, [Score=53.9, Expect=5e-08]; ENSMUSG00000020811, Wscd1, WSC domain containing 1, [Score=51.6, Expect=3e-07]} {Dmel: FBgn0015360, oxt, peptide O-xylosyltransferase, [Score=52.4, Expect=1e-07]} {Celegans: WBGene00005024, sqv-6, Xylosyltransferase sqv-6, [Score=49.7, Expect=8e-07]} {RNA1509_46267} {RNA1310_58556} {RNA815_42573}

Cumulative graph for MligTC455_47984

Region-enriched expression

Region logFC logCPM Pvalue FDR Specificity
RegionR1 - - - -
RegionR2 - - - -
RegionR3 - - - -
RegionR4 - - - -
RegionR5 - - - -
RegionR6 - - - -
RegionR7 - - - -
RegionR8 - - - -

Regeneration-enriched expression

Region logFC logCPM PValue FDR Specificity
RegenerationR1 - - - -
RegenerationR2 - - - -
RegenerationR3 - - - -
RegenerationR4 - - - -
RegenerationR5 - - - -
RegenerationR6 - - - -
RegenerationBL - - - -
RegenerationTP - - - -


Genes with expression patterns similar to MligTC455_47984

Nr. Cluster Total UMI counts Global CPM Transcripts Categories Human homolog Σ Spearman correlations Int1 Int2 Int3 Reg1 Reg2 Reg3 Annotation
1. MligTC455_12878 91 1.89 Mlig455_025598, Mlig455_052895

Neo: -

Age: -

1 - - - 1.000 - -

Mlig455_025598 {REF} {Length: 345} {NoTransDecoderORF} {RNA1310_75777}

Mlig455_052895 {REF} {Length: 467} {NoTransDecoderORF} {RNA1310_75777}
2. MligTC455_25408 35 0.72 Mlig455_026127

Neo: -

Age: Up-Down-Down

1 - - - 1.000 - - Mlig455_026127 {REF} {Length: 2873} {Pfam: Variant SH3 domain [PF07653.19, score=21.9]; RIM-binding protein of the cytomatrix active zone [PF10174.11, score=16.9]} {Mouse: ENSMUSG00000034156, Tspoap1, TSPO associated protein 1, [Score=55.1, Expect=4e-07]} {Smed: dd_Smed_v6_14584_0_1, dd_Smed_v6_14584_0_1, [Score=140, Expect=5e-35]} {RNA1509_45271} {RNA1310_5741} {RNA815_46868}
3. MligTC455_42044 14 0.28 Mlig455_036295

Neo: -

Age: -

1 - - - 1.000 - - Mlig455_036295 {REF} {Length: 1775} {Pfam: Glycosyltransferase sugar-binding region containing DXD motif [PF04488.17, score=32.8]} {Smed: dd_Smed_v6_9783_0_1, dd_Smed_v6_9783_0_1, [Score=62.8, Expect=8e-11]} {RNA1310_147392}
4. MligTC455_47984 3 0.07 Mlig455_069620, Mlig455_069621

Neo: -

Age: -

KREMEN1, WSCD2 1 - - - 1.000 - -

Mlig455_069620 {REF} {Length: 778} {Pfam: WSC domain [PF01822.21, score=54.6]} {Human: ENSG00000183762, KREMEN1, kringle containing transmembrane protein 1, [Score=54.7, Expect=5e-09]} {Mouse: ENSMUSG00000020393, Kremen1, kringle containing transmembrane protein 1, [Score=55.8, Expect=1e-09]; ENSMUSG00000020811, Wscd1, WSC domain containing 1, [Score=53.1, Expect=1e-08]} {RNA1509_46267} {RNA1310_43993} {RNA815_32275.1}

Mlig455_069621 {REF} {Length: 878} {Pfam: WSC domain [PF01822.21, score=51.4]; PAN domain [PF00024.28, score=24.6]} {Human: ENSG00000075035, WSCD2, WSC domain containing 2, [Score=53.9, Expect=7e-08]} {Mouse: ENSMUSG00000063430, Wscd2, WSC domain containing 2, [Score=53.9, Expect=5e-08]; ENSMUSG00000020811, Wscd1, WSC domain containing 1, [Score=51.6, Expect=3e-07]} {Dmel: FBgn0015360, oxt, peptide O-xylosyltransferase, [Score=52.4, Expect=1e-07]} {Celegans: WBGene00005024, sqv-6, Xylosyltransferase sqv-6, [Score=49.7, Expect=8e-07]} {RNA1509_46267} {RNA1310_58556} {RNA815_42573}
5. MligTC455_39500 113 2.35 Mlig455_032931, Mlig455_032946

Neo: -

Age: -

Region-enriched R2: 4.858/0.03664

0.997 - - - 0.997 - -

Mlig455_032931 {REF} {Length: 1361} {Smed: dd_Smed_v6_10177_0_1, dd_Smed_v6_10177_0_1, [Score=60.5, Expect=4e-12]} {RNA1509_58254} {RNA1310_28096.1} {RNA815_22625}

Mlig455_032946 {REF} {Length: 1307} {Pfam: Domain of unknown function (DUF1330) [PF07045.13, score=19.0]} {Smed: dd_Smed_v6_10177_0_1, dd_Smed_v6_10177_0_1, [RH, Score=161, Expect=7e-50]} {RNA1509_58254} {RNA1310_28096.1, RNA1509_58254} {RNA1509_58254, RNA815_22625}
6. MligTC455_45910 20 0.42 Mlig455_068873

Neo: -

Age: -

ANGPT4 0.995 - - - 0.995 - - Mlig455_068873 {REF} {Length: 1013} {Pfam: Fibrinogen beta and gamma chains, C-terminal globular domain [PF00147.20, score=111.7]} {Human: ENSG00000101280, ANGPT4, angiopoietin 4, [Score=95.1, Expect=7e-22]; ENSG00000136859, ANGPTL2, angiopoietin like 2, [Score=91.3, Expect=2e-20]} {Mouse: ENSMUSG00000026835, Fcnb, ficolin B, [Score=93.6, Expect=3e-22]; ENSMUSG00000038742, Angptl6, angiopoietin-like 6, [Score=93.2, Expect=1e-21]; ENSMUSG00000004105, Angptl2, angiopoietin-like 2, [Score=90.9, Expect=1e-20]; ENSMUSG00000033544, Angptl1, angiopoietin-like 1, [Score=89.4, Expect=4e-20]} {Dmel: FBgn0087011, CG41520, [Score=87.0, Expect=2e-19]} {Smed: dd_Smed_v6_18326_0_1, dd_Smed_v6_18326_0_1, [Score=105, Expect=7e-26]} {RNA1310_32728} {RNA815_23388}
7. MligTC455_51872 25 0.51 Mlig455_002762, Mlig455_063364

Neo: -

Age: -

0.99 - - - 0.990 - -

Mlig455_002762 {REF} {Length: 1093} {RNA1310_80259} {RNA815_47710}

Mlig455_063364 {REF} {Length: 1091} {RNA1310_80259} {RNA815_47710}
8. MligTC455_12117 38 0.78 Mlig455_013500

Neo: -

Age: -

0.989 - - - 0.989 - - Mlig455_013500 {REF} {Length: 2103} {RNA1310_23237} {RNA815_45659}
9. MligTC455_14605 9 0.2 Mlig455_014306

Neo: -

Age: -

0.988 - - - 0.988 - - Mlig455_014306 {REF} {Length: 2195} {Pfam: Cyclic nucleotide-binding domain [PF00027.31, score=87.6]} {Dmel: FBgn0022382, Pka-R2, Protein kinase, cAMP-dependent, regulatory subunit type 2, [Score=52.8, Expect=3e-07]} {Smed: dd_Smed_v6_14355_0_1, dd_Smed_v6_14355_0_1, [Score=105, Expect=2e-24]} {RNA1310_19428.1} {RNA815_22602}
10. MligTC455_17978 27 0.56 Mlig455_036611

Neo: Germline

Age: -

0.975 - - - 0.975 - - Mlig455_036611 {REF} {Length: 722} {NoTransDecoderORF} {RNA1509_57957} {RNA1310_23575} {RNA815_9301.2}
11. MligTC455_45909 21 0.43 Mlig455_048634, Mlig455_068858

Neo: -

Age: -

ANGPT4 0.97 - - - 0.970 - -

Mlig455_048634 {REF} {Length: 490} {Pfam: Fibrinogen beta and gamma chains, C-terminal globular domain [PF00147.20, score=169.7]} {Human: ENSG00000101280, ANGPT4, angiopoietin 4, [Score=134, Expect=3e-35]} {Mouse: ENSMUSG00000026835, Fcnb, ficolin B, [Score=127, Expect=3e-34]; ENSMUSG00000004105, Angptl2, angiopoietin-like 2, [Score=126, Expect=1e-32]; ENSMUSG00000033544, Angptl1, angiopoietin-like 1, [Score=124, Expect=6e-32]; ENSMUSG00000038742, Angptl6, angiopoietin-like 6, [Score=123, Expect=8e-32]; ENSMUSG00000033327, Tnxb, tenascin XB, [Score=122, Expect=1e-30]; ENSMUSG00000031465, Angpt2, angiopoietin 2, [Score=122, Expect=3e-31]} {Dmel: FBgn0087011, CG41520, [Score=108, Expect=3e-26]} {Celegans: WBGene00020516, T15B7.1, [Score=66.2, Expect=3e-12]} {Smed: dd_Smed_v6_18326_0_1, dd_Smed_v6_18326_0_1, [Score=121, Expect=5e-31]} {RNA1310_35640.1}

Mlig455_068858 {REF} {Length: 1227} {Pfam: Fibrinogen beta and gamma chains, C-terminal globular domain [PF00147.20, score=169.7]} {Human: ENSG00000101280, ANGPT4, angiopoietin 4, [Score=134, Expect=3e-35]} {Mouse: ENSMUSG00000026835, Fcnb, ficolin B, [Score=127, Expect=3e-34]; ENSMUSG00000004105, Angptl2, angiopoietin-like 2, [Score=126, Expect=1e-32]; ENSMUSG00000033544, Angptl1, angiopoietin-like 1, [Score=124, Expect=6e-32]; ENSMUSG00000038742, Angptl6, angiopoietin-like 6, [Score=123, Expect=8e-32]; ENSMUSG00000033327, Tnxb, tenascin XB, [Score=122, Expect=1e-30]; ENSMUSG00000031465, Angpt2, angiopoietin 2, [Score=122, Expect=3e-31]} {Dmel: FBgn0087011, CG41520, [Score=108, Expect=3e-26]} {Celegans: WBGene00020516, T15B7.1, [Score=66.2, Expect=3e-12]} {Smed: dd_Smed_v6_18326_0_1, dd_Smed_v6_18326_0_1, [Score=121, Expect=5e-31]} {RNA1310_35640.1} {RNA815_23388}
12. MligTC455_32314 119 2.48 Mlig455_020133, Mlig455_045032

Neo: -

Age: -

SLCO1B3 0.969 - - - 0.969 - -

Mlig455_020133 {REF} {Length: 3561} {Pfam: Organic Anion Transporter Polypeptide (OATP) family [PF03137.22, score=297.1]} {Human: ENSG00000111700, SLCO1B3, solute carrier organic anion transporter family member 1B3, [Score=177, Expect=5e-46]; ENSG00000257046, AC011604.2, novel protein, [Score=176, Expect=1e-45]; ENSG00000134538, SLCO1B1, solute carrier organic anion transporter family member 1B1, [Score=170, Expect=7e-44]} {Mouse: ENSMUSG00000040693, Slco4c1, solute carrier organic anion transporter family, member 4C1, [Score=174, Expect=3e-45]; ENSMUSG00000030236, Slco1b2, solute carrier organic anion transporter family, member 1b2, [Score=169, Expect=8e-44]} {Dmel: FBgn0036732, Oatp74D, Organic anion transporting polypeptide 74D, [Score=166, Expect=2e-42]} {Celegans: WBGene00009023, F21G4.1, Solute carrier organic anion transporter family member, [Score=96.7, Expect=2e-20]} {Smed: dd_Smed_v6_3499_0_1, dd_Smed_v6_3499_0_1, [Score=226, Expect=5e-64]} {RNA1509_45076} {RNA1310_16147, RNA1509_45076} {RNA1509_45076, RNA815_14992}

Mlig455_045032 {REF} {Length: 3366} {Pfam: Organic Anion Transporter Polypeptide (OATP) family [PF03137.22, score=320.7]} {Human: ENSG00000111700, SLCO1B3, solute carrier organic anion transporter family member 1B3, [Score=189, Expect=4e-50]; ENSG00000134538, SLCO1B1, solute carrier organic anion transporter family member 1B1, [Score=184, Expect=9e-49]; ENSG00000257046, AC011604.2, novel protein, [Score=184, Expect=2e-48]} {Mouse: ENSMUSG00000030236, Slco1b2, solute carrier organic anion transporter family, member 1b2, [Score=185, Expect=4e-49]; ENSMUSG00000040693, Slco4c1, solute carrier organic anion transporter family, member 4C1, [Score=183, Expect=2e-48]} {Dmel: FBgn0036732, Oatp74D, Organic anion transporting polypeptide 74D, [Score=186, Expect=2e-49]} {Celegans: WBGene00009023, F21G4.1, Solute carrier organic anion transporter family member, [Score=109, Expect=1e-24]} {Smed: dd_Smed_v6_3499_0_1, dd_Smed_v6_3499_0_1, [Score=256, Expect=2e-75]} {RNA1509_45076} {RNA1310_16147} {RNA815_14992}
13. MligTC455_37724 781 16.28 Mlig455_065465

Neo: -

Age: Down-Down-Down, logFC(26M/2M)=-0.698

ROR1 0.969 - - - 0.969 - - Mlig455_065465 {REF} {Length: 4059} {Pfam: Protein tyrosine and serine/threonine kinase [PF07714.19, score=240.2]; Protein kinase domain [PF00069.27, score=101.6]; Immunoglobulin I-set domain [PF07679.18, score=45.2]; Immunoglobulin domain [PF13927.8, score=42.8]; Fz domain [PF01392.24, score=34.0]; Immunoglobulin domain [PF13895.8, score=32.3]; Immunoglobulin domain [PF00047.27, score=24.4]} {Human: ENSG00000185483, ROR1, receptor tyrosine kinase like orphan receptor 1, [Score=398, Expect=5e-123]} {Mouse: ENSMUSG00000035305, Ror1, receptor tyrosine kinase-like orphan receptor 1, [Score=402, Expect=6e-125]} {Dmel: FBgn0010407, Ror, [Score=276, Expect=1e-80]} {Celegans: WBGene00000289, cam-1, Tyrosine-protein kinase receptor cam-1, [RH, Score=220, Expect=1e-59]} {Smed: dd_Smed_v6_7911_0_1, dd_Smed_v6_7911_0_1, [RH, Score=398, Expect=3e-124]} {RNA1509_15729, RNA1509_49184} {RNA1310_2781.1, RNA1509_15729, RNA1509_49184} {RNA1509_15729, RNA1509_49184, RNA815_11745}
14. MligTC455_35894 23 0.48 Mlig455_029906

Neo: -

Age: -

RYK 0.968 - - - 0.968 - - Mlig455_029906 {REF} {Length: 3571} {Pfam: Protein tyrosine and serine/threonine kinase [PF07714.19, score=210.1]; WIF domain [PF02019.20, score=110.2]; Protein kinase domain [PF00069.27, score=79.8]} {Human: ENSG00000163785, RYK, receptor-like tyrosine kinase, [Score=202, Expect=7e-57]} {Mouse: ENSMUSG00000032547, Ryk, receptor-like tyrosine kinase, [Score=202, Expect=9e-57]} {Dmel: FBgn0015380, drl, derailed, [RH, Score=241, Expect=7e-71]} {Celegans: WBGene00003007, lin-18, Inactive tyrosine-protein kinase RYK, [RH, Score=179, Expect=9e-49]} {Smed: dd_Smed_v6_12594_0_3, dd_Smed_v6_12594_0_3, [Score=201, Expect=2e-56]} {RNA1509_58811} {RNA1310_6671.2, RNA1509_58811} {RNA1509_58811, RNA815_41921}
15. MligTC455_02516 97 2.01 Mlig455_055457

Neo: -

Age: -

0.966 - - - 0.966 - - Mlig455_055457 {REF} {Length: 4031} {Pfam: Glycine-rich domain-containing protein-like [PF07173.14, score=151.1]} {Celegans: WBGene00017980, F32B5.7, [RH, Score=268, Expect=8e-78]} {Smed: dd_Smed_v6_5132_0_1, dd_Smed_v6_5132_0_1, [RH, Score=383, Expect=7e-121]} {RNA1509_5401} {RNA1310_7934.1, RNA1509_5401} {RNA1509_5401, RNA815_2330}
16. MligTC455_13376 101 2.1 Mlig455_040613

Neo: -

Age: -

Region-specific R2: 4.973

Region-enriched R2: 6.158/0.00016

0.966 - - - 0.966 - - Mlig455_040613 {REF} {Length: 2807} {RNA1310_27894} {RNA815_60961}
17. MligTC455_25184 563 11.72 Mlig455_005207

Neo: -

Age: Down-Down-Up, logFC(26M/2M)=-1.052

0.963 - - - 0.963 - - Mlig455_005207 {REF} {Length: 3047} {Pfam: Amiloride-sensitive sodium channel [PF00858.26, score=136.2]} {Celegans: WBGene00009073, delm-1, DEgenerin Linked to Mechanosensation, [Score=49.7, Expect=5e-06]} {Smed: dd_Smed_v6_20466_0_2, dd_Smed_v6_20466_0_2, [Score=84.3, Expect=5e-17]} {RNA1509_9013} {RNA1310_7298, RNA1509_9013} {RNA1509_9013, RNA815_2337}
18. MligTC455_37760 15 0.3 Mlig455_014788

Neo: -

Age: -

0.958 - - - 0.958 - - Mlig455_014788 {REF} {Length: 2694} {Pfam: CUB domain [PF00431.22, score=48.3]} {RNA1310_77188}
19. MligTC455_38065 47 0.98 Mlig455_054213

Neo: -

Age: -

KREMEN2 0.951 - - - 0.951 - - Mlig455_054213 {REF} {Length: 924} {Pfam: WSC domain [PF01822.21, score=68.9]} {Human: ENSG00000131650, KREMEN2, kringle containing transmembrane protein 2, [Score=52.4, Expect=1e-07]} {Mouse: ENSMUSG00000040680, Kremen2, kringle containing transmembrane protein 2, [Score=52.0, Expect=1e-07]} {RNA1509_53783} {RNA1310_43773} {RNA815_23638}

Refine r cutoff to:    Show

Berezikov Lab - 2020-2021 © ERIBA