TomoSeq data search

Data search

Results for MligTC455_47990

Cluster	Total UMI counts	Global CPM	Transcripts	Categories	Human homolog	Annotation
MligTC455_47990	1350	28.12	Mlig455_025578, Mlig455_060620	Neo: - Age: Down-Up-Down	MEIS1	Mlig455_025578 {REF} {Length: 2543} {Pfam: N-terminal of Homeobox Meis and PKNOX1 [PF16493.7, score=132.7]; Homeobox KN domain [PF05920.13, score=71.2]; Homeodomain [PF00046.31, score=32.5]} {Human: ENSG00000143995, MEIS1, Meis homeobox 1, [RH, Score=203, Expect=5e-58]; ENSG00000134138, MEIS2, Meis homeobox 2, [RH, Score=199, Expect=2e-56]} {Mouse: ENSMUSG00000020160, Meis1, Meis homeobox 1, [RH, Score=204, Expect=2e-58]; ENSMUSG00000027210, Meis2, Meis homeobox 2, [RH, Score=199, Expect=2e-56]} {Dmel: FBgn0001235, hth, homothorax, [RH, Score=192, Expect=5e-54]} {Celegans: WBGene00006796, unc-62, Homeobox protein unc-62, [RH, Score=171, Expect=9e-46]} {Smed: dd_Smed_v6_6114_0_2, dd_Smed_v6_6114_0_2, [RH, Score=223, Expect=7e-65]} {RNA1509_4465} {RNA1310_4878.1} {RNA815_4367} Mlig455_060620 {REF} {Length: 3501} {Pfam: N-terminal of Homeobox Meis and PKNOX1 [PF16493.7, score=132.7]; Homeobox KN domain [PF05920.13, score=71.2]; Homeodomain [PF00046.31, score=32.5]} {Human: ENSG00000143995, MEIS1, Meis homeobox 1, [RH, Score=203, Expect=5e-58]; ENSG00000134138, MEIS2, Meis homeobox 2, [RH, Score=199, Expect=2e-56]} {Mouse: ENSMUSG00000020160, Meis1, Meis homeobox 1, [RH, Score=204, Expect=2e-58]; ENSMUSG00000027210, Meis2, Meis homeobox 2, [RH, Score=199, Expect=2e-56]} {Dmel: FBgn0001235, hth, homothorax, [RH, Score=192, Expect=5e-54]} {Celegans: WBGene00006796, unc-62, Homeobox protein unc-62, [RH, Score=171, Expect=9e-46]} {Smed: dd_Smed_v6_6114_0_2, dd_Smed_v6_6114_0_2, [RH, Score=223, Expect=7e-65]} {RNA1509_4465} {RNA1310_4878.1, RNA1509_4465} {RNA1509_4465, RNA815_4367}

Cluster

Total UMI counts

Global CPM

Transcripts

Categories

Human homolog

Annotation

MligTC455_47990

1350

28.12

Mlig455_025578, Mlig455_060620

Neo: -

Age: Down-Up-Down

MEIS1

Mlig455_025578 {REF} {Length: 2543} {Pfam: N-terminal of Homeobox Meis and PKNOX1 [PF16493.7, score=132.7]; Homeobox KN domain [PF05920.13, score=71.2]; Homeodomain [PF00046.31, score=32.5]} {Human: ENSG00000143995, MEIS1, Meis homeobox 1, [RH, Score=203, Expect=5e-58]; ENSG00000134138, MEIS2, Meis homeobox 2, [RH, Score=199, Expect=2e-56]} {Mouse: ENSMUSG00000020160, Meis1, Meis homeobox 1, [RH, Score=204, Expect=2e-58]; ENSMUSG00000027210, Meis2, Meis homeobox 2, [RH, Score=199, Expect=2e-56]} {Dmel: FBgn0001235, hth, homothorax, [RH, Score=192, Expect=5e-54]} {Celegans: WBGene00006796, unc-62, Homeobox protein unc-62, [RH, Score=171, Expect=9e-46]} {Smed: dd_Smed_v6_6114_0_2, dd_Smed_v6_6114_0_2, [RH, Score=223, Expect=7e-65]} {RNA1509_4465} {RNA1310_4878.1} {RNA815_4367}

Mlig455_060620 {REF} {Length: 3501} {Pfam: N-terminal of Homeobox Meis and PKNOX1 [PF16493.7, score=132.7]; Homeobox KN domain [PF05920.13, score=71.2]; Homeodomain [PF00046.31, score=32.5]} {Human: ENSG00000143995, MEIS1, Meis homeobox 1, [RH, Score=203, Expect=5e-58]; ENSG00000134138, MEIS2, Meis homeobox 2, [RH, Score=199, Expect=2e-56]} {Mouse: ENSMUSG00000020160, Meis1, Meis homeobox 1, [RH, Score=204, Expect=2e-58]; ENSMUSG00000027210, Meis2, Meis homeobox 2, [RH, Score=199, Expect=2e-56]} {Dmel: FBgn0001235, hth, homothorax, [RH, Score=192, Expect=5e-54]} {Celegans: WBGene00006796, unc-62, Homeobox protein unc-62, [RH, Score=171, Expect=9e-46]} {Smed: dd_Smed_v6_6114_0_2, dd_Smed_v6_6114_0_2, [RH, Score=223, Expect=7e-65]} {RNA1509_4465} {RNA1310_4878.1, RNA1509_4465} {RNA1509_4465, RNA815_4367}

Cumulative graph for MligTC455_47990

Region-enriched expression

Region	logFC	logCPM	Pvalue	FDR
RegionR1	-1.054	5.103	0.31555	0.96498
RegionR2	-0.048	5.103	0.91388	1.00000
RegionR3	0.35	5.103	0.30669	0.84641
RegionR4	0.473	5.103	0.27458	0.58123
RegionR5	-0.269	5.103	0.43438	0.79441
RegionR6	0.987	5.103	0.00306	0.07969
RegionR7	0.217	5.103	0.60248	1.00000
RegionR8	-0.657	5.103	0.25115	0.87046

Regeneration-enriched expression

Region	logFC	logCPM	PValue	FDR
RegenerationR1	1.474	5.103	0.22902	0.95946
RegenerationR2	-0.219	5.103	0.56488	0.90078
RegenerationR3	0.099	5.103	0.80729	0.98421
RegenerationR4	-0.479	5.103	0.26161	0.70939
RegenerationR5	0.175	5.103	0.65506	0.93397
RegenerationR6	-0.599	5.103	0.12995	0.44289
RegenerationBL	-1.02	5.103	0.04582	0.24508
RegenerationTP	-0.483	5.103	0.35639	0.79706

Genes with expression patterns similar to MligTC455_47990

Nr.	Cluster	Total UMI counts	Global CPM	Transcripts	Categories	Human homolog	Σ Spearman correlations	Int1	Int2	Int3	Reg1	Reg2	Reg3	Annotation
1.	MligTC455_47990	1350	28.12	Mlig455_025578, Mlig455_060620	Neo: - Age: Down-Up-Down	MEIS1	6	1.000	1.000	1.000	1.000	1.000	1.000	Mlig455_025578 {REF} {Length: 2543} {Pfam: N-terminal of Homeobox Meis and PKNOX1 [PF16493.7, score=132.7]; Homeobox KN domain [PF05920.13, score=71.2]; Homeodomain [PF00046.31, score=32.5]} {Human: ENSG00000143995, MEIS1, Meis homeobox 1, [RH, Score=203, Expect=5e-58]; ENSG00000134138, MEIS2, Meis homeobox 2, [RH, Score=199, Expect=2e-56]} {Mouse: ENSMUSG00000020160, Meis1, Meis homeobox 1, [RH, Score=204, Expect=2e-58]; ENSMUSG00000027210, Meis2, Meis homeobox 2, [RH, Score=199, Expect=2e-56]} {Dmel: FBgn0001235, hth, homothorax, [RH, Score=192, Expect=5e-54]} {Celegans: WBGene00006796, unc-62, Homeobox protein unc-62, [RH, Score=171, Expect=9e-46]} {Smed: dd_Smed_v6_6114_0_2, dd_Smed_v6_6114_0_2, [RH, Score=223, Expect=7e-65]} {RNA1509_4465} {RNA1310_4878.1} {RNA815_4367} Mlig455_060620 {REF} {Length: 3501} {Pfam: N-terminal of Homeobox Meis and PKNOX1 [PF16493.7, score=132.7]; Homeobox KN domain [PF05920.13, score=71.2]; Homeodomain [PF00046.31, score=32.5]} {Human: ENSG00000143995, MEIS1, Meis homeobox 1, [RH, Score=203, Expect=5e-58]; ENSG00000134138, MEIS2, Meis homeobox 2, [RH, Score=199, Expect=2e-56]} {Mouse: ENSMUSG00000020160, Meis1, Meis homeobox 1, [RH, Score=204, Expect=2e-58]; ENSMUSG00000027210, Meis2, Meis homeobox 2, [RH, Score=199, Expect=2e-56]} {Dmel: FBgn0001235, hth, homothorax, [RH, Score=192, Expect=5e-54]} {Celegans: WBGene00006796, unc-62, Homeobox protein unc-62, [RH, Score=171, Expect=9e-46]} {Smed: dd_Smed_v6_6114_0_2, dd_Smed_v6_6114_0_2, [RH, Score=223, Expect=7e-65]} {RNA1509_4465} {RNA1310_4878.1, RNA1509_4465} {RNA1509_4465, RNA815_4367}
2.	MligTC455_19355	1316	27.42	Mlig455_028094, Mlig455_045219	Neo: - Age: -	EEPD1	0.964	-	-	-	-	-	0.964	Mlig455_028094 {REF} {Length: 4146} {TRANSSPLICED} {Pfam: Helix-hairpin-helix motif [PF12836.9, score=91.0]; Helix-hairpin-helix motif [PF00633.25, score=45.7]; Endonuclease/Exonuclease/phosphatase family [PF03372.25, score=27.7]; Helix-hairpin-helix domain [PF14520.8, score=23.8]; Type II secretion system (T2SS), protein K [PF03934.15, score=21.9]; Helix-hairpin-helix motif [PF14579.8, score=20.4]; Transposase IS116/IS110/IS902 family [PF02371.18, score=19.1]} {Human: ENSG00000122547, EEPD1, endonuclease/exonuclease/phosphatase family domain containing 1, [RH, Score=338, Expect=4e-108]} {Mouse: ENSMUSG00000036611, Eepd1, endonuclease/exonuclease/phosphatase family domain containing 1, [RH, Score=327, Expect=4e-104]} {Smed: dd_Smed_v6_15723_0_1, dd_Smed_v6_15723_0_1, [RH, Score=214, Expect=9e-64]} {RNA1509_19761, RNA1509_28792, RNA1509_54509, RNA1509_7474} {RNA1310_12271.1, RNA1509_19761, RNA1509_28792, RNA1509_54509} {RNA1509_19761, RNA1509_28792, RNA1509_54509, RNA815_19714} Mlig455_045219 {REF} {Length: 3893} {TRANSSPLICED} {Pfam: Helix-hairpin-helix motif [PF12836.9, score=91.0]; Helix-hairpin-helix motif [PF00633.25, score=45.7]; Endonuclease/Exonuclease/phosphatase family [PF03372.25, score=26.6]; Helix-hairpin-helix domain [PF14520.8, score=23.9]; Type II secretion system (T2SS), protein K [PF03934.15, score=21.9]; Helix-hairpin-helix motif [PF14579.8, score=20.4]; Transposase IS116/IS110/IS902 family [PF02371.18, score=19.2]} {Human: ENSG00000122547, EEPD1, endonuclease/exonuclease/phosphatase family domain containing 1, [RH, Score=338, Expect=4e-108]} {Mouse: ENSMUSG00000036611, Eepd1, endonuclease/exonuclease/phosphatase family domain containing 1, [RH, Score=327, Expect=5e-104]} {Smed: dd_Smed_v6_15723_0_1, dd_Smed_v6_15723_0_1, [RH, Score=213, Expect=3e-63]} {RNA1509_7474} {RNA1310_12271.1, RNA1509_7474} {RNA1509_7474, RNA815_19714}
3.	MligTC455_47151	250	5.21	Mlig455_049463	Neo: Int S/G2/M Age: - Region-enriched R5: 1.486/0.01348	MFSD9	0.961	-	-	-	0.961	-	-	Mlig455_049463 {REF} {Length: 1654} {TRANSSPLICED} {Pfam: Major Facilitator Superfamily [PF07690.18, score=40.5]} {Human: ENSG00000135953, MFSD9, major facilitator superfamily domain containing 9, [Score=73.2, Expect=2e-13]} {Mouse: ENSMUSG00000041945, Mfsd9, major facilitator superfamily domain containing 9, [Score=87.4, Expect=2e-18]} {Smed: dd_Smed_v6_9599_0_1, dd_Smed_v6_9599_0_1, [Score=151, Expect=9e-42]} {RNA1509_53696} {RNA1310_20924} {RNA815_32582}
4.	MligTC455_22100	400	8.34	Mlig455_041706, Mlig455_042259	Neo: - Age: logFC(26M/2M)=0.258 Region-enriched R6: 2.129/0.03684	ECE2	0.95	-	-	0.950	-	-	-	Mlig455_041706 {REF} {Length: 2895} {Pfam: Peptidase family M13 [PF01431.23, score=57.4]} {Human: ENSG00000145194, ECE2, endothelin converting enzyme 2, [Score=72.4, Expect=2e-12]; ENSG00000284917, EEF1AKMT4-ECE2, EEF1AKMT4-ECE2 readthrough, [Score=71.6, Expect=3e-12]} {Mouse: ENSMUSG00000115293, Gm49333, predicted gene, 49333, [Score=69.7, Expect=9e-12]; ENSMUSG00000022842, Ece2, endothelin converting enzyme 2, [Score=69.7, Expect=9e-12]} {Dmel: FBgn0031081, Nep3, Neprilysin 3, [Score=62.4, Expect=1e-09]} {Celegans: WBGene00014171, nep-26, NEPrilysin metallopeptidase family, [Score=50.1, Expect=5e-06]} {RNA1509_20201} {RNA1310_6902} {RNA815_3882} Mlig455_042259 {REF} {Length: 2807} {Pfam: Peptidase family M13 [PF01431.23, score=57.4]} {Human: ENSG00000145194, ECE2, endothelin converting enzyme 2, [Score=76.3, Expect=1e-13]; ENSG00000284917, EEF1AKMT4-ECE2, EEF1AKMT4-ECE2 readthrough, [Score=75.5, Expect=2e-13]} {Mouse: ENSMUSG00000115293, Gm49333, predicted gene, 49333, [Score=73.6, Expect=6e-13]; ENSMUSG00000022842, Ece2, endothelin converting enzyme 2, [Score=73.6, Expect=5e-13]} {Dmel: FBgn0031081, Nep3, Neprilysin 3, [Score=63.2, Expect=7e-10]} {Celegans: WBGene00014171, nep-26, NEPrilysin metallopeptidase family, [Score=51.6, Expect=2e-06]} {RNA1509_20201} {RNA1310_6902, RNA1509_20201} {RNA1509_20201, RNA815_3882}