Data search
Results for MligTC455_48042
| Cluster | Total UMI counts | Global CPM | Transcripts | Categories | Human homolog | Annotation |
|---|---|---|---|---|---|---|
| MligTC455_48042 | 265 | 5.52 | Mlig455_015290 | Neo: - Age: - |
SQSTM1 | Mlig455_015290 {REF} {Length: 2622} {Pfam: UBA domain [PF16577.7, score=30.0]; Zinc finger, ZZ type [PF00569.19, score=27.1]; PB1 domain [PF00564.26, score=25.6]} {Human: ENSG00000161011, SQSTM1, sequestosome 1, [RH, Score=98.6, Expect=9e-22]} {Mouse: ENSMUSG00000015837, Sqstm1, sequestosome 1, [RH, Score=107, Expect=7e-25]} {Dmel: FBgn0003231, ref(2)P, refractory to sigma P, [RH, Score=59.7, Expect=2e-09]} {Celegans: WBGene00011737, sqst-1, SeQueSTosome related, [Score=53.1, Expect=3e-07]} {RNA1509_49422, RNA1509_6156} {RNA1310_11564, RNA1509_49422, RNA1509_6156} {RNA1509_49422, RNA1509_6156, RNA815_6596} |
Cumulative graph for MligTC455_48042
Region-enriched expression
| Region | logFC | logCPM | Pvalue | FDR | Specificity |
|---|---|---|---|---|---|
| RegionR1 | -5.531 | 2.95 | 0.20511 | 0.84395 | |
| RegionR2 | 0.908 | 2.95 | 0.36451 | 0.75895 | |
| RegionR3 | 0.548 | 2.95 | 0.56271 | 1.00000 | |
| RegionR4 | 1.178 | 2.95 | 0.20977 | 0.49408 | |
| RegionR5 | 1.446 | 2.95 | 0.05729 | 0.20626 | |
| RegionR6 | 1.569 | 2.95 | 0.04660 | 0.40369 | |
| RegionR7 | 1.527 | 2.95 | 0.10830 | 0.62476 | |
| RegionR8 | -1.645 | 2.95 | 0.99778 | 1.00000 |
Regeneration-enriched expression
| Region | logFC | logCPM | PValue | FDR | Specificity |
|---|---|---|---|---|---|
| RegenerationR1 | 6.11 | 2.95 | 0.16527 | 0.90837 | |
| RegenerationR2 | -1.739 | 2.95 | 0.00233 | 0.07284 | |
| RegenerationR3 | -0.597 | 2.95 | 0.33488 | 0.76002 | |
| RegenerationR4 | -0.531 | 2.95 | 0.35503 | 0.78437 | |
| RegenerationR5 | -0.73 | 2.95 | 0.16902 | 0.59607 | |
| RegenerationR6 | -1.254 | 2.95 | 0.03450 | 0.23290 | |
| RegenerationBL | -1.789 | 2.95 | 0.18169 | 0.51073 | |
| RegenerationTP | 1.474 | 2.95 | 0.12903 | 0.54148 |
Genes with expression patterns similar to MligTC455_48042
| Nr. | Cluster | Total UMI counts | Global CPM | Transcripts | Categories | Human homolog | Σ Spearman correlations | Int1 | Int2 | Int3 | Reg1 | Reg2 | Reg3 | Annotation |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1. | MligTC455_48042 | 265 | 5.52 | Mlig455_015290 | Neo: - Age: - |
SQSTM1 | 6 | 1.000 | 1.000 | 1.000 | 1.000 | 1.000 | 1.000 | Mlig455_015290 {REF} {Length: 2622} {Pfam: UBA domain [PF16577.7, score=30.0]; Zinc finger, ZZ type [PF00569.19, score=27.1]; PB1 domain [PF00564.26, score=25.6]} {Human: ENSG00000161011, SQSTM1, sequestosome 1, [RH, Score=98.6, Expect=9e-22]} {Mouse: ENSMUSG00000015837, Sqstm1, sequestosome 1, [RH, Score=107, Expect=7e-25]} {Dmel: FBgn0003231, ref(2)P, refractory to sigma P, [RH, Score=59.7, Expect=2e-09]} {Celegans: WBGene00011737, sqst-1, SeQueSTosome related, [Score=53.1, Expect=3e-07]} {RNA1509_49422, RNA1509_6156} {RNA1310_11564, RNA1509_49422, RNA1509_6156} {RNA1509_49422, RNA1509_6156, RNA815_6596} |
| 2. | MligTC455_41248 | 1046 | 21.8 | Mlig455_044640 | Neo: - Age: logFC(26M/2M)=-0.313 |
0.97 | - | - | 0.970 | - | - | - | Mlig455_044640 {REF} {Length: 2461} {Smed: dd_Smed_v6_13819_0_1, dd_Smed_v6_13819_0_1, [RH, Score=81.6, Expect=3e-16]} {RNA1509_8335} {RNA1310_4833.1, RNA1509_8335} {RNA1509_8335, RNA815_1430.1} | |
| 3. | MligTC455_28004 | 446 | 9.28 | Mlig455_048494 | Neo: - Age: - |
0.956 | - | - | 0.956 | - | - | - | Mlig455_048494 {REF} {Length: 2408} {TRANSSPLICED} {Pfam: Dystroglycan (Dystrophin-associated glycoprotein 1) [PF05454.13, score=29.4]} {RNA1509_25059} {RNA1310_35177} {RNA815_7915.1} |
Berezikov Lab - 2020-2021 © ERIBA