TomoSeq data search

Data search

Results for MligTC455_48075

Cluster	Total UMI counts	Global CPM	Transcripts	Categories	Human homolog	Annotation
MligTC455_48075	1238	25.79	Mlig455_022548, Mlig455_025481	Neo: - Age: Down-Up-Up, logFC(26M/2M)=0.762	RNF185	Mlig455_022548 {REF} {Length: 1606} {TRANSSPLICED} {Pfam: Zinc finger, C3HC4 type (RING finger) [PF13920.8, score=40.7]; Zinc finger, C3HC4 type (RING finger) [PF00097.27, score=40.4]; RING-type zinc-finger [PF13445.8, score=39.4]; Ring finger domain [PF13639.8, score=37.3]; Zinc finger, C3HC4 type (RING finger) [PF13923.8, score=34.5]; Prokaryotic RING finger family 4 [PF14447.8, score=32.0]; zinc-RING finger domain [PF14634.8, score=31.6]; zinc finger of C3HC4-type, RING [PF15227.8, score=30.8]; RING-H2 zinc finger domain [PF12678.9, score=23.5]; Baculovirus immediate-early protein (IE-0) [PF05290.13, score=21.5]; Anaphase-promoting complex subunit 11 RING-H2 finger [PF12861.9, score=21.4]} {Human: ENSG00000138942, RNF185, ring finger protein 185, [RH, Score=166, Expect=9e-52]; ENSG00000183574, RNF5, ring finger protein 5, [RH, Score=161, Expect=3e-50]; ENSG00000204308, RNF5, ring finger protein 5, [RH, Score=161, Expect=3e-50]; ENSG00000225452, RNF5, ring finger protein 5, [RH, Score=161, Expect=3e-50]; ENSG00000223767, RNF5, ring finger protein 5, [RH, Score=161, Expect=3e-50]; ENSG00000228405, RNF5, ring finger protein 5, [RH, Score=161, Expect=3e-50]; ENSG00000227277, RNF5, ring finger protein 5, [RH, Score=161, Expect=3e-50]; ENSG00000228907, RNF5, ring finger protein 5, [RH, Score=161, Expect=3e-50]} {Mouse: ENSMUSG00000020448, Rnf185, ring finger protein 185, [RH, Score=170, Expect=2e-53]; ENSMUSG00000015478, Rnf5, ring finger protein 5, [RH, Score=163, Expect=3e-51]} {Dmel: FBgn0030693, CG8974, [RH, Score=152, Expect=9e-46]} {Celegans: WBGene00004381, rnf-5, RING finger protein 5, [RH, Score=134, Expect=1e-39]} {Smed: dd_Smed_v6_5004_0_1, dd_Smed_v6_5004_0_1, [RH, Score=167, Expect=1e-52]} {RNA1509_12431} {RNA1310_12532.1} {RNA815_8137.1} Mlig455_025481 {REF} {Length: 1606} {TRANSSPLICED} {Pfam: Zinc finger, C3HC4 type (RING finger) [PF13920.8, score=40.7]; Zinc finger, C3HC4 type (RING finger) [PF00097.27, score=40.4]; RING-type zinc-finger [PF13445.8, score=39.4]; Ring finger domain [PF13639.8, score=37.3]; Zinc finger, C3HC4 type (RING finger) [PF13923.8, score=34.5]; Prokaryotic RING finger family 4 [PF14447.8, score=32.0]; zinc-RING finger domain [PF14634.8, score=31.6]; zinc finger of C3HC4-type, RING [PF15227.8, score=30.8]; RING-H2 zinc finger domain [PF12678.9, score=23.5]; Baculovirus immediate-early protein (IE-0) [PF05290.13, score=21.5]; Anaphase-promoting complex subunit 11 RING-H2 finger [PF12861.9, score=21.4]} {Human: ENSG00000138942, RNF185, ring finger protein 185, [RH, Score=166, Expect=9e-52]; ENSG00000183574, RNF5, ring finger protein 5, [RH, Score=161, Expect=3e-50]; ENSG00000204308, RNF5, ring finger protein 5, [RH, Score=161, Expect=3e-50]; ENSG00000225452, RNF5, ring finger protein 5, [RH, Score=161, Expect=3e-50]; ENSG00000223767, RNF5, ring finger protein 5, [RH, Score=161, Expect=3e-50]; ENSG00000228405, RNF5, ring finger protein 5, [RH, Score=161, Expect=3e-50]; ENSG00000227277, RNF5, ring finger protein 5, [RH, Score=161, Expect=3e-50]; ENSG00000228907, RNF5, ring finger protein 5, [RH, Score=161, Expect=3e-50]} {Mouse: ENSMUSG00000020448, Rnf185, ring finger protein 185, [RH, Score=170, Expect=2e-53]; ENSMUSG00000015478, Rnf5, ring finger protein 5, [RH, Score=163, Expect=3e-51]} {Dmel: FBgn0030693, CG8974, [RH, Score=152, Expect=9e-46]} {Celegans: WBGene00004381, rnf-5, RING finger protein 5, [RH, Score=134, Expect=1e-39]} {Smed: dd_Smed_v6_5004_0_1, dd_Smed_v6_5004_0_1, [RH, Score=167, Expect=1e-52]} {RNA1509_12431, RNA1509_35586, RNA1509_38566} {RNA1310_12532.1, RNA1509_35586, RNA1509_38566} {RNA1509_35586, RNA1509_38566, RNA815_8137.1}

Cluster

Total UMI counts

Global CPM

Transcripts

Categories

Human homolog

Annotation

MligTC455_48075

1238

25.79

Mlig455_022548, Mlig455_025481

Neo: -

Age: Down-Up-Up, logFC(26M/2M)=0.762

RNF185

Mlig455_022548 {REF} {Length: 1606} {TRANSSPLICED} {Pfam: Zinc finger, C3HC4 type (RING finger) [PF13920.8, score=40.7]; Zinc finger, C3HC4 type (RING finger) [PF00097.27, score=40.4]; RING-type zinc-finger [PF13445.8, score=39.4]; Ring finger domain [PF13639.8, score=37.3]; Zinc finger, C3HC4 type (RING finger) [PF13923.8, score=34.5]; Prokaryotic RING finger family 4 [PF14447.8, score=32.0]; zinc-RING finger domain [PF14634.8, score=31.6]; zinc finger of C3HC4-type, RING [PF15227.8, score=30.8]; RING-H2 zinc finger domain [PF12678.9, score=23.5]; Baculovirus immediate-early protein (IE-0) [PF05290.13, score=21.5]; Anaphase-promoting complex subunit 11 RING-H2 finger [PF12861.9, score=21.4]} {Human: ENSG00000138942, RNF185, ring finger protein 185, [RH, Score=166, Expect=9e-52]; ENSG00000183574, RNF5, ring finger protein 5, [RH, Score=161, Expect=3e-50]; ENSG00000204308, RNF5, ring finger protein 5, [RH, Score=161, Expect=3e-50]; ENSG00000225452, RNF5, ring finger protein 5, [RH, Score=161, Expect=3e-50]; ENSG00000223767, RNF5, ring finger protein 5, [RH, Score=161, Expect=3e-50]; ENSG00000228405, RNF5, ring finger protein 5, [RH, Score=161, Expect=3e-50]; ENSG00000227277, RNF5, ring finger protein 5, [RH, Score=161, Expect=3e-50]; ENSG00000228907, RNF5, ring finger protein 5, [RH, Score=161, Expect=3e-50]} {Mouse: ENSMUSG00000020448, Rnf185, ring finger protein 185, [RH, Score=170, Expect=2e-53]; ENSMUSG00000015478, Rnf5, ring finger protein 5, [RH, Score=163, Expect=3e-51]} {Dmel: FBgn0030693, CG8974, [RH, Score=152, Expect=9e-46]} {Celegans: WBGene00004381, rnf-5, RING finger protein 5, [RH, Score=134, Expect=1e-39]} {Smed: dd_Smed_v6_5004_0_1, dd_Smed_v6_5004_0_1, [RH, Score=167, Expect=1e-52]} {RNA1509_12431} {RNA1310_12532.1} {RNA815_8137.1}

Mlig455_025481 {REF} {Length: 1606} {TRANSSPLICED} {Pfam: Zinc finger, C3HC4 type (RING finger) [PF13920.8, score=40.7]; Zinc finger, C3HC4 type (RING finger) [PF00097.27, score=40.4]; RING-type zinc-finger [PF13445.8, score=39.4]; Ring finger domain [PF13639.8, score=37.3]; Zinc finger, C3HC4 type (RING finger) [PF13923.8, score=34.5]; Prokaryotic RING finger family 4 [PF14447.8, score=32.0]; zinc-RING finger domain [PF14634.8, score=31.6]; zinc finger of C3HC4-type, RING [PF15227.8, score=30.8]; RING-H2 zinc finger domain [PF12678.9, score=23.5]; Baculovirus immediate-early protein (IE-0) [PF05290.13, score=21.5]; Anaphase-promoting complex subunit 11 RING-H2 finger [PF12861.9, score=21.4]} {Human: ENSG00000138942, RNF185, ring finger protein 185, [RH, Score=166, Expect=9e-52]; ENSG00000183574, RNF5, ring finger protein 5, [RH, Score=161, Expect=3e-50]; ENSG00000204308, RNF5, ring finger protein 5, [RH, Score=161, Expect=3e-50]; ENSG00000225452, RNF5, ring finger protein 5, [RH, Score=161, Expect=3e-50]; ENSG00000223767, RNF5, ring finger protein 5, [RH, Score=161, Expect=3e-50]; ENSG00000228405, RNF5, ring finger protein 5, [RH, Score=161, Expect=3e-50]; ENSG00000227277, RNF5, ring finger protein 5, [RH, Score=161, Expect=3e-50]; ENSG00000228907, RNF5, ring finger protein 5, [RH, Score=161, Expect=3e-50]} {Mouse: ENSMUSG00000020448, Rnf185, ring finger protein 185, [RH, Score=170, Expect=2e-53]; ENSMUSG00000015478, Rnf5, ring finger protein 5, [RH, Score=163, Expect=3e-51]} {Dmel: FBgn0030693, CG8974, [RH, Score=152, Expect=9e-46]} {Celegans: WBGene00004381, rnf-5, RING finger protein 5, [RH, Score=134, Expect=1e-39]} {Smed: dd_Smed_v6_5004_0_1, dd_Smed_v6_5004_0_1, [RH, Score=167, Expect=1e-52]} {RNA1509_12431, RNA1509_35586, RNA1509_38566} {RNA1310_12532.1, RNA1509_35586, RNA1509_38566} {RNA1509_35586, RNA1509_38566, RNA815_8137.1}

Cumulative graph for MligTC455_48075

Region-enriched expression

Region	logFC	logCPM	Pvalue	FDR
RegionR1	-2.364	4.908	0.04662	0.51580
RegionR2	-0.589	4.908	0.22439	0.59468
RegionR3	0.644	4.908	0.08092	0.50325
RegionR4	0.971	4.908	0.02512	0.11964
RegionR5	0.403	4.908	0.27405	0.59999
RegionR6	0.145	4.908	0.71568	1.00000
RegionR7	0.468	4.908	0.28318	0.91657
RegionR8	0.321	4.908	0.53206	1.00000

Regeneration-enriched expression

Region	logFC	logCPM	PValue	FDR
RegenerationR1	2.372	4.908	0.09490	0.80503
RegenerationR2	-0.21	4.908	0.61748	0.92274
RegenerationR3	-0.434	4.908	0.31392	0.74390
RegenerationR4	-0.196	4.908	0.65387	0.93496
RegenerationR5	0.032	4.908	0.93985	1.00000
RegenerationR6	-0.05	4.908	0.91057	1.00000
RegenerationBL	-0.448	4.908	0.32911	0.69528
RegenerationTP	0.373	4.908	0.42002	0.84424

Genes with expression patterns similar to MligTC455_48075

Nr.	Cluster	Total UMI counts	Global CPM	Transcripts	Categories	Human homolog	Σ Spearman correlations	Int1	Int2	Int3	Reg1	Reg2	Reg3	Annotation
1.	MligTC455_48075	1238	25.79	Mlig455_022548, Mlig455_025481	Neo: - Age: Down-Up-Up, logFC(26M/2M)=0.762	RNF185	6	1.000	1.000	1.000	1.000	1.000	1.000	Mlig455_022548 {REF} {Length: 1606} {TRANSSPLICED} {Pfam: Zinc finger, C3HC4 type (RING finger) [PF13920.8, score=40.7]; Zinc finger, C3HC4 type (RING finger) [PF00097.27, score=40.4]; RING-type zinc-finger [PF13445.8, score=39.4]; Ring finger domain [PF13639.8, score=37.3]; Zinc finger, C3HC4 type (RING finger) [PF13923.8, score=34.5]; Prokaryotic RING finger family 4 [PF14447.8, score=32.0]; zinc-RING finger domain [PF14634.8, score=31.6]; zinc finger of C3HC4-type, RING [PF15227.8, score=30.8]; RING-H2 zinc finger domain [PF12678.9, score=23.5]; Baculovirus immediate-early protein (IE-0) [PF05290.13, score=21.5]; Anaphase-promoting complex subunit 11 RING-H2 finger [PF12861.9, score=21.4]} {Human: ENSG00000138942, RNF185, ring finger protein 185, [RH, Score=166, Expect=9e-52]; ENSG00000183574, RNF5, ring finger protein 5, [RH, Score=161, Expect=3e-50]; ENSG00000204308, RNF5, ring finger protein 5, [RH, Score=161, Expect=3e-50]; ENSG00000225452, RNF5, ring finger protein 5, [RH, Score=161, Expect=3e-50]; ENSG00000223767, RNF5, ring finger protein 5, [RH, Score=161, Expect=3e-50]; ENSG00000228405, RNF5, ring finger protein 5, [RH, Score=161, Expect=3e-50]; ENSG00000227277, RNF5, ring finger protein 5, [RH, Score=161, Expect=3e-50]; ENSG00000228907, RNF5, ring finger protein 5, [RH, Score=161, Expect=3e-50]} {Mouse: ENSMUSG00000020448, Rnf185, ring finger protein 185, [RH, Score=170, Expect=2e-53]; ENSMUSG00000015478, Rnf5, ring finger protein 5, [RH, Score=163, Expect=3e-51]} {Dmel: FBgn0030693, CG8974, [RH, Score=152, Expect=9e-46]} {Celegans: WBGene00004381, rnf-5, RING finger protein 5, [RH, Score=134, Expect=1e-39]} {Smed: dd_Smed_v6_5004_0_1, dd_Smed_v6_5004_0_1, [RH, Score=167, Expect=1e-52]} {RNA1509_12431} {RNA1310_12532.1} {RNA815_8137.1} Mlig455_025481 {REF} {Length: 1606} {TRANSSPLICED} {Pfam: Zinc finger, C3HC4 type (RING finger) [PF13920.8, score=40.7]; Zinc finger, C3HC4 type (RING finger) [PF00097.27, score=40.4]; RING-type zinc-finger [PF13445.8, score=39.4]; Ring finger domain [PF13639.8, score=37.3]; Zinc finger, C3HC4 type (RING finger) [PF13923.8, score=34.5]; Prokaryotic RING finger family 4 [PF14447.8, score=32.0]; zinc-RING finger domain [PF14634.8, score=31.6]; zinc finger of C3HC4-type, RING [PF15227.8, score=30.8]; RING-H2 zinc finger domain [PF12678.9, score=23.5]; Baculovirus immediate-early protein (IE-0) [PF05290.13, score=21.5]; Anaphase-promoting complex subunit 11 RING-H2 finger [PF12861.9, score=21.4]} {Human: ENSG00000138942, RNF185, ring finger protein 185, [RH, Score=166, Expect=9e-52]; ENSG00000183574, RNF5, ring finger protein 5, [RH, Score=161, Expect=3e-50]; ENSG00000204308, RNF5, ring finger protein 5, [RH, Score=161, Expect=3e-50]; ENSG00000225452, RNF5, ring finger protein 5, [RH, Score=161, Expect=3e-50]; ENSG00000223767, RNF5, ring finger protein 5, [RH, Score=161, Expect=3e-50]; ENSG00000228405, RNF5, ring finger protein 5, [RH, Score=161, Expect=3e-50]; ENSG00000227277, RNF5, ring finger protein 5, [RH, Score=161, Expect=3e-50]; ENSG00000228907, RNF5, ring finger protein 5, [RH, Score=161, Expect=3e-50]} {Mouse: ENSMUSG00000020448, Rnf185, ring finger protein 185, [RH, Score=170, Expect=2e-53]; ENSMUSG00000015478, Rnf5, ring finger protein 5, [RH, Score=163, Expect=3e-51]} {Dmel: FBgn0030693, CG8974, [RH, Score=152, Expect=9e-46]} {Celegans: WBGene00004381, rnf-5, RING finger protein 5, [RH, Score=134, Expect=1e-39]} {Smed: dd_Smed_v6_5004_0_1, dd_Smed_v6_5004_0_1, [RH, Score=167, Expect=1e-52]} {RNA1509_12431, RNA1509_35586, RNA1509_38566} {RNA1310_12532.1, RNA1509_35586, RNA1509_38566} {RNA1509_35586, RNA1509_38566, RNA815_8137.1}
2.	MligTC455_38007	1041	21.68	Mlig455_056971	Neo: Neoblast Age: Down-Down-Up	NOP2	0.969	-	-	-	-	-	0.969	Mlig455_056971 {REF} {Length: 2378} {TRANSSPLICED} {Pfam: 16S rRNA methyltransferase RsmB/F [PF01189.19, score=244.4]; N-terminal domain of 16S rRNA methyltransferase RsmF [PF17125.7, score=34.0]; Protein-L-isoaspartate(D-aspartate) O-methyltransferase (PCMT) [PF01135.21, score=25.8]; FtsJ-like methyltransferase [PF01728.21, score=23.3]; Methyltransferase domain [PF13847.8, score=20.9]; Met-10+ like-protein [PF02475.18, score=19.9]} {Human: ENSG00000111641, NOP2, NOP2 nucleolar protein, [RH, Score=469, Expect=4e-156]} {Mouse: ENSMUSG00000038279, Nop2, NOP2 nucleolar protein, [RH, Score=461, Expect=2e-153]} {Dmel: FBgn0033741, CG8545, [RH, Score=426, Expect=1e-138]} {Celegans: WBGene00021073, nol-1, NucleOLar protein, [RH, Score=392, Expect=2e-128]} {Smed: dd_Smed_v6_7417_0_1, dd_Smed_v6_7417_0_1, [RH, Score=397, Expect=4e-132]} {RNA1509_25023, RNA1509_31185} {RNA1310_9187.2, RNA1509_25023, RNA1509_31185} {RNA1509_25023, RNA1509_31185, RNA815_3009.1}
3.	MligTC455_41539	720	14.99	Mlig455_016675, Mlig455_056342	Neo: - Age: -	SNW1	0.959	-	-	-	-	-	0.959	Mlig455_016675 {REF} {Length: 2809} {Pfam: SKIP/SNW domain [PF02731.17, score=220.0]} {Human: ENSG00000100603, SNW1, SNW domain containing 1, [RH, Score=526, Expect=0.0]} {Mouse: ENSMUSG00000021039, Snw1, SNW domain containing 1, [RH, Score=526, Expect=0.0]} {Dmel: FBgn0004856, Bx42, [RH, Score=471, Expect=9e-162]} {Celegans: WBGene00004806, skp-1, mammalian SKIP (Ski interacting protein) homolog, [RH, Score=395, Expect=5e-132]} {Smed: dd_Smed_v6_2325_0_1, dd_Smed_v6_2325_0_1, [RH, Score=342, Expect=7e-113]} {RNA1509_6755} {RNA1310_12702} {RNA815_5214} Mlig455_056342 {REF} {Length: 3983} {Pfam: SKIP/SNW domain [PF02731.17, score=220.0]} {Human: ENSG00000100603, SNW1, SNW domain containing 1, [RH, Score=526, Expect=0.0]} {Mouse: ENSMUSG00000021039, Snw1, SNW domain containing 1, [RH, Score=526, Expect=0.0]} {Dmel: FBgn0004856, Bx42, [RH, Score=471, Expect=9e-162]} {Celegans: WBGene00004806, skp-1, mammalian SKIP (Ski interacting protein) homolog, [RH, Score=395, Expect=5e-132]} {Smed: dd_Smed_v6_2325_0_1, dd_Smed_v6_2325_0_1, [RH, Score=342, Expect=7e-113]} {RNA1509_29838, RNA1509_48695, RNA1509_6755} {RNA1310_12702, RNA1509_29838, RNA1509_48695, RNA1509_6755} {RNA1509_29838, RNA1509_48695, RNA1509_6755, RNA815_5214}
4.	MligTC455_40783	358	7.47	Mlig455_023953	Neo: - Age: -		0.95	-	-	-	-	-	0.950	Mlig455_023953 {REF} {Length: 2835} {TRANSSPLICED} {Pfam: Chondroitin N-acetylgalactosaminyltransferase [PF05679.18, score=130.0]} {Mouse: ENSMUSG00000032997, Chpf, chondroitin polymerizing factor, [RH, Score=48.9, Expect=1e-05]} {Smed: dd_Smed_v6_12496_0_1, dd_Smed_v6_12496_0_1, [RH, Score=136, Expect=4e-35]} {RNA1509_22811, RNA1509_50630, RNA1509_53600} {RNA1310_15267, RNA1509_22811, RNA1509_50630, RNA1509_53600} {RNA1509_22811, RNA1509_50630, RNA1509_53600, RNA815_7956}