Data search
Results for MligTC455_48110
| Cluster | Total UMI counts | Global CPM | Transcripts | Categories | Human homolog | Annotation |
|---|---|---|---|---|---|---|
| MligTC455_48110 | 372 | 7.74 | Mlig455_056044, Mlig455_061610 | Neo: - Age: - Region-enriched R2: 2.405/0.02438 |
Mlig455_056044 {REF} {Length: 251} {TRANSSPLICED} {NoTransDecoderORF} {RNA1509_45490} {RNA1310_117372.1} {RNA815_2204} Mlig455_061610 {REF} {Length: 251} {TRANSSPLICED} {NoTransDecoderORF} {RNA1509_45490} {RNA1310_117372.1, RNA1509_45490} {RNA1509_45490, RNA815_2204} |
Cumulative graph for MligTC455_48110
Region-enriched expression
| Region | logFC | logCPM | Pvalue | FDR | Specificity |
|---|---|---|---|---|---|
| RegionR1 | -2.163 | 3.471 | 0.11744 | 0.70589 | |
| RegionR2 | 2.405 | 3.471 | 0.00116 | 0.02438 | |
| RegionR3 | 0.136 | 3.471 | 0.81371 | 1.00000 | |
| RegionR4 | -1.371 | 3.471 | 0.05834 | 0.21399 | |
| RegionR5 | -0.16 | 3.471 | 0.76531 | 1.00000 | |
| RegionR6 | 0.867 | 3.471 | 0.13936 | 0.67110 | |
| RegionR7 | 0.509 | 3.471 | 0.47210 | 1.00000 | |
| RegionR8 | -0.223 | 3.471 | 0.81213 | 1.00000 |
Regeneration-enriched expression
| Region | logFC | logCPM | PValue | FDR | Specificity |
|---|---|---|---|---|---|
| RegenerationR1 | -2.65 | 3.471 | 0.66955 | 1.00000 | |
| RegenerationR2 | -0.285 | 3.471 | 0.66733 | 0.94436 | |
| RegenerationR3 | 0.896 | 3.471 | 0.26637 | 0.70110 | |
| RegenerationR4 | 1.161 | 3.471 | 0.14457 | 0.57004 | |
| RegenerationR5 | 0.061 | 3.471 | 0.92202 | 1.00000 | |
| RegenerationR6 | 0.35 | 3.471 | 0.62731 | 0.88510 | |
| RegenerationBL | -0.589 | 3.471 | 0.60161 | 0.94818 | |
| RegenerationTP | 1.904 | 3.471 | 0.02557 | 0.27055 |
Genes with expression patterns similar to MligTC455_48110
| Nr. | Cluster | Total UMI counts | Global CPM | Transcripts | Categories | Human homolog | Σ Spearman correlations | Int1 | Int2 | Int3 | Reg1 | Reg2 | Reg3 | Annotation |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1. | MligTC455_48110 | 372 | 7.74 | Mlig455_056044, Mlig455_061610 | Neo: - Age: - Region-enriched R2: 2.405/0.02438 |
6 | 1.000 | 1.000 | 1.000 | 1.000 | 1.000 | 1.000 | Mlig455_056044 {REF} {Length: 251} {TRANSSPLICED} {NoTransDecoderORF} {RNA1509_45490} {RNA1310_117372.1} {RNA815_2204} Mlig455_061610 {REF} {Length: 251} {TRANSSPLICED} {NoTransDecoderORF} {RNA1509_45490} {RNA1310_117372.1, RNA1509_45490} {RNA1509_45490, RNA815_2204} |
|
| 2. | MligTC455_21609 | 576 | 12 | Mlig455_019995 | Neo: - Age: logFC(26M/2M)=-0.355 Region-enriched R5: 1.448/0.04285 |
PPEF1 | 1.823 | 0.861 | - | - | 0.962 | - | - | Mlig455_019995 {REF} {Length: 2672} {Pfam: Calcineurin-like phosphoesterase [PF00149.30, score=91.9]; EF-hand domain pair [PF13499.8, score=82.4]; EF hand [PF00036.34, score=69.9]; EF-hand domain pair [PF13833.8, score=61.5]; EF-hand domain [PF13405.8, score=50.4]; PPP5 TPR repeat region [PF08321.14, score=37.8]; EF hand [PF13202.8, score=34.3]; EF-hand domain [PF14658.8, score=21.5]; IQ calmodulin-binding motif [PF00612.29, score=19.3]} {Human: ENSG00000086717, PPEF1, protein phosphatase with EF-hand domain 1, [RH, Score=555, Expect=0.0]} {Mouse: ENSMUSG00000062168, Ppef1, protein phosphatase with EF hand calcium-binding domain 1, [RH, Score=541, Expect=0.0]} {Dmel: FBgn0265959, rdgC, retinal degeneration C, [RH, Score=553, Expect=0.0]} {Celegans: WBGene00003969, pef-1, Serine/threonine-protein phosphatase with EF-hands pef-1, [RH, Score=625, Expect=0.0]} {Smed: dd_Smed_v6_11874_0_1, dd_Smed_v6_11874_0_1, [RH, Score=719, Expect=0.0]} {RNA1509_5920} {RNA1310_6882.1, RNA1509_5920} {RNA1509_5920, RNA815_2260.1} |
| 3. | MligTC455_12503 | 81 | 1.69 | Mlig455_007611, Mlig455_007636, Mlig455_054199, Mlig455_061602, Mlig455_061615 | Neo: - Age: Down-Up-Up |
0.978 | - | - | - | - | 0.978 | - | Mlig455_007611 {REF} {Length: 243} {TRANSSPLICED} {NoTransDecoderORF} {RNA1509_32550} {RNA1310_57270} {RNA815_14295} Mlig455_007636 {REF} {Length: 217} {TRANSSPLICED} {NoTransDecoderORF} {RNA1509_32550} {RNA1310_57270} {RNA815_14295} Mlig455_054199 {REF} {Length: 371} {NoTransDecoderORF} {RNA1509_38113} {RNA1310_56484.1} {RNA815_14295} Mlig455_061602 {REF} {Length: 247} {TRANSSPLICED} {NoTransDecoderORF} {RNA1509_38113} {RNA1310_57270} {RNA815_14295} Mlig455_061615 {REF} {Length: 234} {TRANSSPLICED} {NoTransDecoderORF} {RNA1509_38113} {RNA1310_57270} {RNA815_14295} |
|
| 4. | MligTC455_36516 | 495 | 10.32 | Mlig455_032048 | Neo: - Age: - Regeneration-downregulated BL: -4.315 Regeneration-depleted BL: -4.315 |
0.972 | - | - | - | - | - | 0.972 | Mlig455_032048 {REF} {Length: 2397} {TRANSSPLICED} {Smed: dd_Smed_v6_8694_0_1, dd_Smed_v6_8694_0_1, [RH, Score=74.7, Expect=7e-17]} {RNA1509_19681, RNA1509_42038} {RNA1310_1563, RNA1509_19681, RNA1509_42038} {RNA1509_19681, RNA1509_42038, RNA815_36419} | |
| 5. | MligTC455_36515 | 487 | 10.15 | Mlig455_024333 | Neo: - Age: - Regeneration-downregulated BL: -4.316 Regeneration-depleted BL: -4.316 |
0.971 | - | - | - | - | - | 0.971 | Mlig455_024333 {REF} {Length: 839} {RNA1509_48477} {RNA1310_73282, RNA1509_48477} {RNA1509_48477, RNA815_40394} | |
| 6. | MligTC455_20033 | 148 | 3.08 | Mlig455_003086 | Neo: Germline Age: logFC(26M/2M)=0.784 Region-specific R4: 6.443 Region-enriched R4: 4.415/0.00030 |
0.962 | - | - | - | - | 0.962 | - | Mlig455_003086 {REF} {Length: 1008} {RNA1509_40334} {RNA1310_37951} {RNA815_18858.1} | |
| 7. | MligTC455_48928 | 26 | 0.55 | Mlig455_055757 | Neo: - Age: - |
0.958 | - | - | - | - | 0.958 | - | Mlig455_055757 {REF} {Length: 666} {NoTransDecoderORF} {RNA1310_102252} {RNA815_45044} | |
| 8. | MligTC455_47346 | 144 | 3.01 | Mlig455_054231 | Neo: - Age: Up-Down-Up |
0.954 | - | - | 0.954 | - | - | - | Mlig455_054231 {REF} {Length: 1363} {NoTransDecoderORF} {RNA1509_53154} {RNA1310_30331, RNA1509_53154} {RNA1509_53154, RNA815_19620} | |
| 9. | MligTC455_54172 | 139 | 2.89 | Mlig455_010947 | Neo: Germline Age: Up-Down-Down Region-specific R4: 6.319 Region-enriched R4: 2.570/0.04231 |
0.953 | - | - | - | - | 0.953 | - | Mlig455_010947 {REF} {Length: 2780} {RNA1509_21301, RNA1509_27892, RNA1509_55865} {RNA1310_14403, RNA1509_21301, RNA1509_27892, RNA1509_55865} {RNA1509_21301, RNA1509_27892, RNA1509_55865, RNA815_5347} | |
| 10. | MligTC455_36310 | 356 | 7.42 | Mlig455_035589, Mlig455_051880 | Neo: - Age: - |
0.952 | - | - | 0.952 | - | - | - | Mlig455_035589 {REF} {Length: 2100} {Pfam: PH domain [PF00169.31, score=29.6]} {RNA1509_47709} {RNA1310_34455} {RNA815_4675.1} Mlig455_051880 {REF} {Length: 2495} {Pfam: PH domain [PF00169.31, score=28.5]} {RNA1509_47709} {RNA1310_30265.1} {RNA815_4675.1} |
|
| 11. | MligTC455_34430 | 109 | 2.26 | Mlig455_031496 | Neo: - Age: Up-Down-Down Region-enriched R7: 3.010/0.04401 |
TRPC4 | 0.951 | - | - | 0.951 | - | - | - | Mlig455_031496 {REF} {Length: 3366} {Pfam: Ion transport protein [PF00520.33, score=20.3]} {Human: ENSG00000133107, TRPC4, transient receptor potential cation channel subfamily C member 4, [Score=90.5, Expect=4e-18]} {Mouse: ENSMUSG00000027748, Trpc4, transient receptor potential cation channel, subfamily C, member 4, [Score=88.2, Expect=2e-17]} {Dmel: FBgn0005614, trpl, transient receptor potential-like, [Score=84.3, Expect=2e-16]} {Celegans: WBGene00006614, trp-1, Transient-receptor-potential-like protein, [Score=73.6, Expect=3e-13]} {Smed: dd_Smed_v6_13048_0_2, dd_Smed_v6_13048_0_2, [Score=74.3, Expect=1e-13]} {RNA1310_14297} {RNA815_5679} |