TomoSeq data search

Data search

Results for MligTC455_48188

Cluster

Total UMI counts

Global CPM

Transcripts

Categories

Human homolog

Annotation

MligTC455_48188

920

19.17

Mlig455_007722, Mlig455_007798

Neo: -

Age: -

PPP1R2

Mlig455_007722 {REF} {Length: 1715} {TRANSSPLICED} {Pfam: Protein phosphatase inhibitor 2 (IPP-2) [PF04979.16, score=104.8]} {Human: ENSG00000184203, PPP1R2, protein phosphatase 1 regulatory inhibitor subunit 2, [RH, Score=100, Expect=2e-25]} {Mouse: ENSMUSG00000047714, Ppp1r2, protein phosphatase 1, regulatory inhibitor subunit 2, [Score=85.5, Expect=6e-20]} {Dmel: FBgn0028429, I-2, Inhibitor-2, [Score=65.5, Expect=4e-12]} {Celegans: WBGene00021312, szy-2, Suppressor of ZYg-1, [Score=72.4, Expect=2e-15]} {Smed: dd_Smed_v6_5135_0_1, dd_Smed_v6_5135_0_1, [Score=72.8, Expect=7e-16]} {RNA1509_46923} {RNA1310_36950} {RNA815_19047}

Mlig455_007798 {REF} {Length: 1599} {TRANSSPLICED} {Pfam: Protein phosphatase inhibitor 2 (IPP-2) [PF04979.16, score=104.8]} {Human: ENSG00000184203, PPP1R2, protein phosphatase 1 regulatory inhibitor subunit 2, [RH, Score=100, Expect=2e-25]} {Mouse: ENSMUSG00000047714, Ppp1r2, protein phosphatase 1, regulatory inhibitor subunit 2, [Score=85.5, Expect=6e-20]} {Dmel: FBgn0028429, I-2, Inhibitor-2, [Score=65.5, Expect=4e-12]} {Celegans: WBGene00021312, szy-2, Suppressor of ZYg-1, [Score=72.4, Expect=2e-15]} {Smed: dd_Smed_v6_5135_0_1, dd_Smed_v6_5135_0_1, [Score=72.8, Expect=7e-16]} {RNA1509_19470, RNA1509_27987, RNA1509_31387, RNA1509_46923} {RNA1310_36950, RNA1509_19470, RNA1509_27987, RNA1509_31387, RNA1509_46923} {RNA1509_19470, RNA1509_27987, RNA1509_31387, RNA1509_46923, RNA815_19047}

Cumulative graph for MligTC455_48188

Region-enriched expression

Region	logFC	logCPM	Pvalue	FDR	Specificity
RegionR1	-0.576	4.237	0.62213	1.00000
RegionR2	1.083	4.237	0.13317	0.45315
RegionR3	0.475	4.237	0.38051	0.91230
RegionR4	-0.663	4.237	0.29214	0.60323
RegionR5	0.686	4.237	0.17590	0.44952
RegionR6	-0.015	4.237	0.97744	1.00000
RegionR7	-1.048	4.237	0.14200	0.70376
RegionR8	0.058	4.237	0.93317	1.00000

Regeneration-enriched expression

Region	logFC	logCPM	PValue	FDR	Specificity
RegenerationR1	0.6	4.237	0.68999	1.00000
RegenerationR2	0.328	4.237	0.61195	0.92002
RegenerationR3	1.447	4.237	0.03941	0.34945
RegenerationR4	1.543	4.237	0.02500	0.25393
RegenerationR5	0.54	4.237	0.40751	0.80416
RegenerationR6	1.001	4.237	0.16157	0.49049
RegenerationBL	0.667	4.237	0.37115	0.73948
RegenerationTP	0.929	4.237	0.23649	0.68227

Genes with expression patterns similar to MligTC455_48188

Nr.	Cluster	Total UMI counts	Global CPM	Transcripts	Categories	Human homolog	Σ Spearman correlations	Int1	Int2	Int3	Reg1	Reg2	Reg3	Annotation
1.	MligTC455_48188	920	19.17	Mlig455_007722, Mlig455_007798	Neo: - Age: -	PPP1R2	6	1.000	1.000	1.000	1.000	1.000	1.000	Mlig455_007722 {REF} {Length: 1715} {TRANSSPLICED} {Pfam: Protein phosphatase inhibitor 2 (IPP-2) [PF04979.16, score=104.8]} {Human: ENSG00000184203, PPP1R2, protein phosphatase 1 regulatory inhibitor subunit 2, [RH, Score=100, Expect=2e-25]} {Mouse: ENSMUSG00000047714, Ppp1r2, protein phosphatase 1, regulatory inhibitor subunit 2, [Score=85.5, Expect=6e-20]} {Dmel: FBgn0028429, I-2, Inhibitor-2, [Score=65.5, Expect=4e-12]} {Celegans: WBGene00021312, szy-2, Suppressor of ZYg-1, [Score=72.4, Expect=2e-15]} {Smed: dd_Smed_v6_5135_0_1, dd_Smed_v6_5135_0_1, [Score=72.8, Expect=7e-16]} {RNA1509_46923} {RNA1310_36950} {RNA815_19047} Mlig455_007798 {REF} {Length: 1599} {TRANSSPLICED} {Pfam: Protein phosphatase inhibitor 2 (IPP-2) [PF04979.16, score=104.8]} {Human: ENSG00000184203, PPP1R2, protein phosphatase 1 regulatory inhibitor subunit 2, [RH, Score=100, Expect=2e-25]} {Mouse: ENSMUSG00000047714, Ppp1r2, protein phosphatase 1, regulatory inhibitor subunit 2, [Score=85.5, Expect=6e-20]} {Dmel: FBgn0028429, I-2, Inhibitor-2, [Score=65.5, Expect=4e-12]} {Celegans: WBGene00021312, szy-2, Suppressor of ZYg-1, [Score=72.4, Expect=2e-15]} {Smed: dd_Smed_v6_5135_0_1, dd_Smed_v6_5135_0_1, [Score=72.8, Expect=7e-16]} {RNA1509_19470, RNA1509_27987, RNA1509_31387, RNA1509_46923} {RNA1310_36950, RNA1509_19470, RNA1509_27987, RNA1509_31387, RNA1509_46923} {RNA1509_19470, RNA1509_27987, RNA1509_31387, RNA1509_46923, RNA815_19047}
2.	MligTC455_26595	154	3.21	Mlig455_025232	Neo: - Age: -	APEH	1.715	-	0.951	-	0.764	-	-	Mlig455_025232 {REF} {Length: 2791} {TRANSSPLICED} {Pfam: Prolyl oligopeptidase family [PF00326.23, score=163.9]; Dienelactone hydrolase family [PF01738.20, score=26.9]; X-Pro dipeptidyl-peptidase (S15 family) [PF02129.20, score=23.1]; Serine aminopeptidase, S33 [PF12146.10, score=19.1]} {Human: ENSG00000164062, APEH, acylaminoacyl-peptide hydrolase, [Score=81.3, Expect=3e-15]} {Mouse: ENSMUSG00000032590, Apeh, acylpeptide hydrolase, [Score=89.0, Expect=7e-18]} {Celegans: WBGene00001057, dpf-4, Dipeptidyl Peptidase Four (IV) family, [RH, Score=367, Expect=2e-118]} {Smed: dd_Smed_v6_3723_0_1, dd_Smed_v6_3723_0_1, [RH, Score=466, Expect=1e-156]} {RNA1509_3789} {RNA1310_6314.1} {RNA815_1799}
3.	MligTC455_22311	74	1.53	Mlig455_001822	Neo: - Age: -		1.665	-	0.952	-	-	0.713	-	Mlig455_001822 {REF} {Length: 1911} {RNA1310_30832} {RNA815_15518}
4.	MligTC455_25986	145	3.01	Mlig455_045629	Neo: - Age: -	AGPAT4	0.984	-	-	-	0.984	-	-	Mlig455_045629 {REF} {Length: 4178} {TRANSSPLICED} {Pfam: Acyltransferase C-terminus [PF16076.7, score=72.0]; Acyltransferase [PF01553.23, score=65.1]} {Human: ENSG00000026652, AGPAT4, 1-acylglycerol-3-phosphate O-acyltransferase 4, [RH, Score=282, Expect=6e-92]; ENSG00000160216, AGPAT3, 1-acylglycerol-3-phosphate O-acyltransferase 3, [RH, Score=270, Expect=3e-87]} {Mouse: ENSMUSG00000001211, Agpat3, 1-acylglycerol-3-phosphate O-acyltransferase 3, [RH, Score=273, Expect=2e-88]; ENSMUSG00000023827, Agpat4, 1-acylglycerol-3-phosphate O-acyltransferase 4 (lysophosphatidic acid acyltransferase, delta), [RH, Score=266, Expect=9e-86]} {Dmel: FBgn0036623, CG4729, [RH, Score=231, Expect=2e-72]} {Celegans: WBGene00044631, bus-18, [Score=106, Expect=2e-25]} {Smed: dd_Smed_v6_5643_0_1, dd_Smed_v6_5643_0_1, [RH, Score=228, Expect=2e-71]} {RNA1509_56272} {RNA1310_17321.1, RNA1509_56272} {RNA1509_56272, RNA815_7698}
5.	MligTC455_51455	235	4.9	Mlig455_020896	Neo: - Age: - Region-enriched R2: 2.815/0.01995	INTS9	0.969	-	-	0.969	-	-	-	Mlig455_020896 {REF} {Length: 2141} {TRANSSPLICED} {Pfam: Metallo-beta-lactamase superfamily domain [PF16661.7, score=46.8]; Beta-Casp domain [PF10996.10, score=24.8]} {Human: ENSG00000104299, INTS9, integrator complex subunit 9, [RH, Score=350, Expect=6e-111]} {Mouse: ENSMUSG00000021975, Ints9, integrator complex subunit 9, [RH, Score=341, Expect=2e-107]} {Dmel: FBgn0036570, IntS9, Integrator 9, [RH, Score=308, Expect=2e-95]} {Celegans: WBGene00017608, F19F10.12, [RH, Score=206, Expect=9e-58]} {Smed: dd_Smed_v6_5262_0_1, dd_Smed_v6_5262_0_1, [RH, Score=317, Expect=5e-99]} {RNA1509_13901} {RNA1310_11245.1} {RNA815_21239}
6.	MligTC455_44203	530	11.04	Mlig455_025315	Neo: Int S/G2/M Age: Down-Up-Down	BCKDHA	0.966	-	-	-	-	-	0.966	Mlig455_025315 {REF} {Length: 2202} {TRANSSPLICED} {Pfam: Dehydrogenase E1 component [PF00676.22, score=304.4]; 1-deoxy-D-xylulose-5-phosphate synthase [PF13292.8, score=22.4]; Thiamine pyrophosphate enzyme, C-terminal TPP binding domain [PF02775.23, score=21.2]} {Human: ENSG00000248098, BCKDHA, branched chain keto acid dehydrogenase E1, alpha polypeptide, [RH, Score=500, Expect=6e-176]; ENSG00000255730, AC011462.1, novel protein, [RH, Score=498, Expect=2e-174]} {Mouse: ENSMUSG00000060376, Bckdha, branched chain ketoacid dehydrogenase E1, alpha polypeptide, [RH, Score=502, Expect=7e-177]} {Dmel: FBgn0037709, CG8199, [RH, Score=458, Expect=1e-159]} {Celegans: WBGene00012713, bckd-1A, 2-oxoisovalerate dehydrogenase subunit alpha, mitochondrial, [RH, Score=481, Expect=8e-169]} {Smed: dd_Smed_v6_3288_0_1, dd_Smed_v6_3288_0_1, [RH, Score=488, Expect=7e-172]} {RNA1509_21323} {RNA1310_8924.1} {RNA815_7812}
7.	MligTC455_48554	732	15.25	Mlig455_034730	Neo: Neoblast, stringent Age: Up-Down-Up Region-enriched R4: 1.681/0.00369	VRK1	0.96	-	-	-	-	-	0.960	Mlig455_034730 {REF} {Length: 2086} {TRANSSPLICED} {Pfam: Protein kinase domain [PF00069.27, score=57.8]; Protein tyrosine and serine/threonine kinase [PF07714.19, score=31.9]} {Human: ENSG00000100749, VRK1, vaccinia related kinase 1, [RH, Score=263, Expect=8e-83]} {Mouse: ENSMUSG00000021115, Vrk1, vaccinia related kinase 1, [RH, Score=258, Expect=6e-81]; ENSMUSG00000064090, Vrk2, vaccinia related kinase 2, [RH, Score=250, Expect=8e-77]} {Dmel: FBgn0027889, ball, ballchen, [RH, Score=222, Expect=2e-65]} {Celegans: WBGene00017895, vrk-1, Serine/threonine-protein kinase VRK1, [RH, Score=173, Expect=2e-47]} {Smed: dd_Smed_v6_11627_0_1, dd_Smed_v6_11627_0_1, [RH, Score=207, Expect=7e-62]} {RNA1509_10330, RNA1509_56921} {RNA1310_12263, RNA1509_56921} {RNA1509_56921, RNA815_15053}
8.	MligTC455_20347	1156	24.08	Mlig455_045615	Neo: - Age: -		0.959	-	-	-	-	-	0.959	Mlig455_045615 {REF} {Length: 1254} {TRANSSPLICED} {RNA1509_12723, RNA1509_33256} {RNA1310_26083, RNA1509_12723, RNA1509_33256} {RNA1509_12723, RNA1509_33256, RNA815_11437}
9.	MligTC455_22808	1087	22.65	Mlig455_002437	Neo: - Age: Up-Down-Up, logFC(26M/2M)=0.422	DST	0.958	-	-	-	0.958	-	-	Mlig455_002437 {REF} {Length: 33069} {TRANSSPLICED} {Pfam: Plectin repeat [PF00681.22, score=164.4]; Spectrin repeat [PF00435.23, score=159.2]; Calponin homology (CH) domain [PF00307.33, score=130.6]; Growth-Arrest-Specific Protein 2 Domain [PF02187.19, score=101.1]; EF hand [PF00036.34, score=33.9]; EF-hand domain pair [PF13499.8, score=32.5]; EF-hand domain [PF13405.8, score=31.6]; EF hand [PF13202.8, score=26.2]; CAMSAP CH domain [PF11971.10, score=25.1]; EF-hand domain pair [PF13833.8, score=20.0]} {Human: ENSG00000151914, DST, dystonin, [RH, Score=961, Expect=0.0]; ENSG00000127603, MACF1, microtubule-actin crosslinking factor 1, [RH, Score=939, Expect=0.0]} {Mouse: ENSMUSG00000026131, Dst, dystonin, [RH, Score=962, Expect=0.0]; ENSMUSG00000028649, Macf1, microtubule-actin crosslinking factor 1, [RH, Score=954, Expect=0.0]} {Dmel: FBgn0013733, shot, short stop, [RH, Score=1176, Expect=0.0]} {Celegans: WBGene00006876, vab-10, VAB-10B protein, [Score=228, Expect=2e-58]} {Smed: dd_Smed_v6_1205_0_11, dd_Smed_v6_1205_0_11, [Score=852, Expect=0.0]} {RNA1509_37236, RNA1509_58374} {RNA1310_159, RNA1509_37236, RNA1509_58374} {RNA1509_37236, RNA1509_58374, RNA815_374}
10.	MligTC455_32872	223	4.64	Mlig455_028341	Neo: - Age: -		0.952	-	0.952	-	-	-	-	Mlig455_028341 {REF} {Length: 2114} {Pfam: Carboxysome shell peptide mid-region [PF12288.10, score=20.7]} {RNA1509_29488} {RNA1310_45860.1} {RNA815_25627}
11.	MligTC455_08580	1176	24.5	Mlig455_051980	Neo: Germline Age: - Region-enriched R4: 3.238/0.00000		0.95	-	-	-	-	-	0.950	Mlig455_051980 {REF} {Length: 951} {TRANSSPLICED} {Pfam: Pyridoxamine 5'-phosphate oxidase [PF01243.22, score=43.5]; Pyridoxamine 5'-phosphate oxidase like [PF16242.7, score=30.2]} {Dmel: FBgn0051472, sgll, sugarlethal, [Score=67.8, Expect=2e-13]} {Celegans: WBGene00018996, F57B9.1, Putative pyridoxamine 5'-phosphate oxidase, [Score=62.0, Expect=1e-11]} {RNA1509_12538, RNA1509_20426, RNA1509_20530, RNA1509_28190, RNA1509_36599} {RNA1310_40414, RNA1509_12538, RNA1509_20426, RNA1509_20530, RNA1509_28190, RNA1509_36599} {RNA1509_12538, RNA1509_20426, RNA1509_20530, RNA1509_28190, RNA1509_36599, RNA815_11238.1}
12.	MligTC455_24573	258	5.38	Mlig455_026373	Neo: - Age: Up-Down-Down	ZNFX1	0.95	-	-	0.950	-	-	-	Mlig455_026373 {REF} {Length: 6810} {Pfam: AAA domain [PF13087.8, score=127.1]; AAA domain [PF13086.8, score=91.1]; AAA domain [PF13245.8, score=33.7]; AAA domain [PF13604.8, score=27.0]} {Human: ENSG00000124201, ZNFX1, zinc finger NFX1-type containing 1, [RH, Score=672, Expect=0.0]} {Mouse: ENSMUSG00000039501, Znfx1, zinc finger, NFX1-type containing 1, [RH, Score=763, Expect=0.0]} {Dmel: FBgn0039165, CG6204, [RH, Score=186, Expect=1e-47]} {Celegans: WBGene00014208, ZK1067.2, [RH, Score=374, Expect=2e-104]} {Smed: dd_Smed_v6_2581_0_1, dd_Smed_v6_2581_0_1, [Score=1086, Expect=0.0]} {RNA1509_2240, RNA1509_30772} {RNA1310_697.1, RNA1509_30772} {RNA1509_30772, RNA815_202}
13.	MligTC455_38244	734	15.29	Mlig455_022877	Neo: - Age: Down-Up-Down	TRAPPC3	0.95	-	-	-	-	-	0.950	Mlig455_022877 {REF} {Length: 1976} {TRANSSPLICED} {Pfam: Transport protein particle (TRAPP) component [PF04051.18, score=107.6]} {Human: ENSG00000054116, TRAPPC3, trafficking protein particle complex 3, [RH, Score=234, Expect=6e-79]} {Mouse: ENSMUSG00000028847, Trappc3, trafficking protein particle complex 3, [RH, Score=235, Expect=3e-79]} {Dmel: FBgn0260859, Bet3, Blocked early in transport 3, [RH, Score=207, Expect=3e-68]} {Celegans: WBGene00014222, trpp-3, Trafficking protein particle complex subunit 3 homolog, [Score=143, Expect=2e-43]} {Smed: dd_Smed_v6_4848_0_1, dd_Smed_v6_4848_0_1, [RH, Score=219, Expect=4e-73]} {RNA1509_14723} {RNA1310_13044} {RNA815_24609}

Berezikov Lab - 2020-2021 © ERIBA