TomoSeq data search

Data search

Results for MligTC455_24573

Cluster

Total UMI counts

Global CPM

Transcripts

Categories

Human homolog

Annotation

MligTC455_24573

258

5.38

Mlig455_026373

Neo: -

Age: Up-Down-Down

ZNFX1

Mlig455_026373 {REF} {Length: 6810} {Pfam: AAA domain [PF13087.8, score=127.1]; AAA domain [PF13086.8, score=91.1]; AAA domain [PF13245.8, score=33.7]; AAA domain [PF13604.8, score=27.0]} {Human: ENSG00000124201, ZNFX1, zinc finger NFX1-type containing 1, [RH, Score=672, Expect=0.0]} {Mouse: ENSMUSG00000039501, Znfx1, zinc finger, NFX1-type containing 1, [RH, Score=763, Expect=0.0]} {Dmel: FBgn0039165, CG6204, [RH, Score=186, Expect=1e-47]} {Celegans: WBGene00014208, ZK1067.2, [RH, Score=374, Expect=2e-104]} {Smed: dd_Smed_v6_2581_0_1, dd_Smed_v6_2581_0_1, [Score=1086, Expect=0.0]} {RNA1509_2240, RNA1509_30772} {RNA1310_697.1, RNA1509_30772} {RNA1509_30772, RNA815_202}

Cumulative graph for MligTC455_24573

Region-enriched expression

Region	logFC	logCPM	Pvalue	FDR	Specificity
RegionR1	-1.583	2.958	0.25860	0.90670
RegionR2	0.727	2.958	0.28634	0.67419
RegionR3	1.017	2.958	0.02943	0.29426
RegionR4	-0.249	2.958	0.67765	0.97280
RegionR5	-0.338	2.958	0.48777	0.85126
RegionR6	0.035	2.958	0.94402	1.00000
RegionR7	0.143	2.958	0.82861	1.00000
RegionR8	0.248	2.958	0.75184	1.00000

Regeneration-enriched expression

Region	logFC	logCPM	PValue	FDR	Specificity
RegenerationR1	-4.304	2.958	0.46054	1.00000
RegenerationR2	-0.088	2.958	0.87287	1.00000
RegenerationR3	-0.192	2.958	0.75180	0.96522
RegenerationR4	-0.157	2.958	0.81290	0.99046
RegenerationR5	0.437	2.958	0.44246	0.82622
RegenerationR6	-0.115	2.958	0.86562	1.00000
RegenerationBL	-0.426	2.958	0.64495	0.98296
RegenerationTP	0.181	2.958	0.82213	1.00000

Genes with expression patterns similar to MligTC455_24573

Nr.	Cluster	Total UMI counts	Global CPM	Transcripts	Categories	Human homolog	Σ Spearman correlations	Int1	Int2	Int3	Reg1	Reg2	Reg3	Annotation
1.	MligTC455_24573	258	5.38	Mlig455_026373	Neo: - Age: Up-Down-Down	ZNFX1	6	1.000	1.000	1.000	1.000	1.000	1.000	Mlig455_026373 {REF} {Length: 6810} {Pfam: AAA domain [PF13087.8, score=127.1]; AAA domain [PF13086.8, score=91.1]; AAA domain [PF13245.8, score=33.7]; AAA domain [PF13604.8, score=27.0]} {Human: ENSG00000124201, ZNFX1, zinc finger NFX1-type containing 1, [RH, Score=672, Expect=0.0]} {Mouse: ENSMUSG00000039501, Znfx1, zinc finger, NFX1-type containing 1, [RH, Score=763, Expect=0.0]} {Dmel: FBgn0039165, CG6204, [RH, Score=186, Expect=1e-47]} {Celegans: WBGene00014208, ZK1067.2, [RH, Score=374, Expect=2e-104]} {Smed: dd_Smed_v6_2581_0_1, dd_Smed_v6_2581_0_1, [Score=1086, Expect=0.0]} {RNA1509_2240, RNA1509_30772} {RNA1310_697.1, RNA1509_30772} {RNA1509_30772, RNA815_202}
2.	MligTC455_32863	188	3.91	Mlig455_028353	Neo: Int S/G2/M Age: Up-Up-Down		0.983	-	-	0.983	-	-	-	Mlig455_028353 {REF} {Length: 1978} {TRANSSPLICED} {RNA1509_40955} {RNA1310_60768} {RNA815_8954.1}
3.	MligTC455_51455	235	4.9	Mlig455_020896	Neo: - Age: - Region-enriched R2: 2.815/0.01995	INTS9	0.976	-	-	0.976	-	-	-	Mlig455_020896 {REF} {Length: 2141} {TRANSSPLICED} {Pfam: Metallo-beta-lactamase superfamily domain [PF16661.7, score=46.8]; Beta-Casp domain [PF10996.10, score=24.8]} {Human: ENSG00000104299, INTS9, integrator complex subunit 9, [RH, Score=350, Expect=6e-111]} {Mouse: ENSMUSG00000021975, Ints9, integrator complex subunit 9, [RH, Score=341, Expect=2e-107]} {Dmel: FBgn0036570, IntS9, Integrator 9, [RH, Score=308, Expect=2e-95]} {Celegans: WBGene00017608, F19F10.12, [RH, Score=206, Expect=9e-58]} {Smed: dd_Smed_v6_5262_0_1, dd_Smed_v6_5262_0_1, [RH, Score=317, Expect=5e-99]} {RNA1509_13901} {RNA1310_11245.1} {RNA815_21239}
4.	MligTC455_38572	208	4.33	Mlig455_060781	Neo: - Age: -	TTC30B	0.97	-	-	0.970	-	-	-	Mlig455_060781 {REF} {Length: 3017} {TRANSSPLICED} {Pfam: Tetratricopeptide repeat [PF14559.8, score=61.6]; Tetratricopeptide repeat [PF07719.19, score=57.2]; Tetratricopeptide repeat [PF13424.8, score=41.4]; Anaphase-promoting complex, cyclosome, subunit 3 [PF12895.9, score=40.1]; Tetratricopeptide repeat [PF00515.30, score=38.6]; Tetratricopeptide repeat [PF13432.8, score=35.4]; Tetratricopeptide repeat [PF13428.8, score=30.0]; TPR repeat [PF13414.8, score=26.7]; Tetratricopeptide repeat [PF13174.8, score=24.4]; Tetratricopeptide repeat [PF13176.8, score=22.7]; Tetratricopeptide repeat [PF13181.8, score=20.9]; Tetratricopeptide repeat [PF13371.8, score=19.0]; Tetratricopeptide repeat [PF13374.8, score=19.0]} {Human: ENSG00000196659, TTC30B, tetratricopeptide repeat domain 30B, [RH, Score=863, Expect=0.0]; ENSG00000197557, TTC30A, tetratricopeptide repeat domain 30A, [RH, Score=854, Expect=0.0]} {Mouse: ENSMUSG00000075271, Ttc30a1, tetratricopeptide repeat domain 30A1, [RH, Score=863, Expect=0.0]; ENSMUSG00000075273, Ttc30b, tetratricopeptide repeat domain 30B, [RH, Score=859, Expect=0.0]; ENSMUSG00000075272, Ttc30a2, tetratricopeptide repeat domain 30A2, [RH, Score=853, Expect=0.0]} {Dmel: FBgn0032470, CG5142, [RH, Score=532, Expect=0.0]} {Celegans: WBGene00001117, dyf-1, Tetratricopeptide repeat protein 30 homolog, [RH, Score=582, Expect=0.0]} {Smed: dd_Smed_v6_8798_0_1, dd_Smed_v6_8798_0_1, [RH, Score=971, Expect=0.0]} {RNA1509_15898} {RNA1310_10695, RNA1509_15898} {RNA1509_15898, RNA815_3646.1}
5.	MligTC455_31753	424	8.84	Mlig455_020445	Neo: Int S/G2/M Age: logFC(26M/2M)=-0.395	TRAPPC2L	0.964	-	-	0.964	-	-	-	Mlig455_020445 {REF} {Length: 1583} {TRANSSPLICED} {Pfam: Sedlin, N-terminal conserved region [PF04628.15, score=80.9]} {Human: ENSG00000167515, TRAPPC2L, trafficking protein particle complex 2 like, [RH, Score=140, Expect=3e-43]} {Mouse: ENSMUSG00000015013, Trappc2l, trafficking protein particle complex 2-like, [RH, Score=141, Expect=8e-44]} {Dmel: FBgn0033605, CG9067, [RH, Score=120, Expect=9e-36]} {Celegans: WBGene00044604, T10F2.5, [RH, Score=67.0, Expect=6e-15]} {Smed: dd_Smed_v6_1506_0_1, dd_Smed_v6_1506_0_1, [RH, Score=108, Expect=6e-31]} {RNA1509_16235} {RNA1310_27236} {RNA815_17508}
6.	MligTC455_46119	436	9.08	Mlig455_049511	Neo: - Age: -	ARPC5	0.959	-	-	0.959	-	-	-	Mlig455_049511 {REF} {Length: 3235} {TRANSSPLICED} {Pfam: ARP2/3 complex 16 kDa subunit (p16-Arc) [PF04699.16, score=101.7]} {Human: ENSG00000162704, ARPC5, actin related protein 2/3 complex subunit 5, [Score=100, Expect=3e-24]} {Mouse: ENSMUSG00000008475, Arpc5, actin related protein 2/3 complex, subunit 5, [Score=99.4, Expect=5e-24]} {Dmel: FBgn0031437, Arpc5, Actin-related protein 2/3 complex, subunit 5, [Score=103, Expect=1e-25]} {Smed: dd_Smed_v6_781_0_1, dd_Smed_v6_781_0_1, [Score=80.1, Expect=1e-17]} {RNA1509_17990} {RNA1310_17080} {RNA815_4362.1}
7.	MligTC455_12178	807	16.81	Mlig455_022827	Neo: - Age: Up-Down-Down		0.958	-	-	0.958	-	-	-	Mlig455_022827 {REF} {Length: 4286} {Pfam: PAN domain [PF00024.28, score=48.7]} {RNA1509_963} {RNA1310_1822} {RNA815_613.1}
8.	MligTC455_10320	13	0.27	Mlig455_031761	Neo: - Age: Up-Down-Down		0.954	-	-	-	-	0.954	-	Mlig455_031761 {REF} {Length: 1301} {TRANSSPLICED} {RNA1509_43937} {RNA1310_6592} {RNA815_1698.1}
9.	MligTC455_38195	432	9.01	Mlig455_063704	Neo: - Age: Down-Down-Down, logFC(26M/2M)=-0.492	TRPM1	0.95	-	-	0.950	-	-	-	Mlig455_063704 {REF} {Length: 5184} {Pfam: Ankyrin repeats (3 copies) [PF12796.9, score=94.9]; Ankyrin repeats (many copies) [PF13637.8, score=83.0]; Ankyrin repeats (many copies) [PF13857.8, score=63.8]; Ankyrin repeat [PF13606.8, score=61.6]; Ankyrin repeat [PF00023.32, score=55.8]; Ion transport protein [PF00520.33, score=53.8]} {Human: ENSG00000134160, TRPM1, transient receptor potential cation channel subfamily M member 1, [Score=132, Expect=2e-30]; ENSG00000274965, TRPM1, transient receptor potential cation channel subfamily M member 1, [Score=132, Expect=2e-30]; ENSG00000083067, TRPM3, transient receptor potential cation channel subfamily M member 3, [Score=129, Expect=1e-29]} {Mouse: ENSMUSG00000052387, Trpm3, transient receptor potential cation channel, subfamily M, member 3, [Score=131, Expect=3e-30]; ENSMUSG00000030523, Trpm1, transient receptor potential cation channel, subfamily M, member 1, [Score=129, Expect=9e-30]} {Dmel: FBgn0265194, Trpm, Transient receptor potential cation channel, subfamily M, [Score=118, Expect=2e-26]} {Celegans: WBGene00001796, gtl-2, Gon-Two Like (TRP subfamily), [Score=79.0, Expect=2e-14]} {Smed: dd_Smed_v6_10717_0_1, dd_Smed_v6_10717_0_1, [RH, Score=189, Expect=2e-49]} {RNA1509_33075, RNA1509_41062, RNA1509_48059, RNA1509_9269} {RNA1310_4916, RNA1509_33075, RNA1509_41062, RNA1509_48059, RNA1509_9269} {RNA1509_33075, RNA1509_41062, RNA1509_48059, RNA1509_9269, RNA815_3093}
10.	MligTC455_48188	920	19.17	Mlig455_007722, Mlig455_007798	Neo: - Age: -	PPP1R2	0.95	-	-	0.950	-	-	-	Mlig455_007722 {REF} {Length: 1715} {TRANSSPLICED} {Pfam: Protein phosphatase inhibitor 2 (IPP-2) [PF04979.16, score=104.8]} {Human: ENSG00000184203, PPP1R2, protein phosphatase 1 regulatory inhibitor subunit 2, [RH, Score=100, Expect=2e-25]} {Mouse: ENSMUSG00000047714, Ppp1r2, protein phosphatase 1, regulatory inhibitor subunit 2, [Score=85.5, Expect=6e-20]} {Dmel: FBgn0028429, I-2, Inhibitor-2, [Score=65.5, Expect=4e-12]} {Celegans: WBGene00021312, szy-2, Suppressor of ZYg-1, [Score=72.4, Expect=2e-15]} {Smed: dd_Smed_v6_5135_0_1, dd_Smed_v6_5135_0_1, [Score=72.8, Expect=7e-16]} {RNA1509_46923} {RNA1310_36950} {RNA815_19047} Mlig455_007798 {REF} {Length: 1599} {TRANSSPLICED} {Pfam: Protein phosphatase inhibitor 2 (IPP-2) [PF04979.16, score=104.8]} {Human: ENSG00000184203, PPP1R2, protein phosphatase 1 regulatory inhibitor subunit 2, [RH, Score=100, Expect=2e-25]} {Mouse: ENSMUSG00000047714, Ppp1r2, protein phosphatase 1, regulatory inhibitor subunit 2, [Score=85.5, Expect=6e-20]} {Dmel: FBgn0028429, I-2, Inhibitor-2, [Score=65.5, Expect=4e-12]} {Celegans: WBGene00021312, szy-2, Suppressor of ZYg-1, [Score=72.4, Expect=2e-15]} {Smed: dd_Smed_v6_5135_0_1, dd_Smed_v6_5135_0_1, [Score=72.8, Expect=7e-16]} {RNA1509_19470, RNA1509_27987, RNA1509_31387, RNA1509_46923} {RNA1310_36950, RNA1509_19470, RNA1509_27987, RNA1509_31387, RNA1509_46923} {RNA1509_19470, RNA1509_27987, RNA1509_31387, RNA1509_46923, RNA815_19047}

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