TomoSeq data search

Data search

Results for MligTC455_48238

Cluster

Total UMI counts

Global CPM

Transcripts

Categories

Human homolog

Annotation

MligTC455_48238

341

7.11

Mlig455_064342

Neo: -

Age: -

EXOC3

Mlig455_064342 {REF} {Length: 4793} {Pfam: Exocyst complex component Sec6 [PF06046.15, score=220.4]; Autophagy protein ATG17-like domain [PF04108.14, score=22.6]} {Human: ENSG00000180104, EXOC3, exocyst complex component 3, [RH, Score=269, Expect=1e-78]} {Mouse: ENSMUSG00000034152, Exoc3, exocyst complex component 3, [RH, Score=267, Expect=4e-78]} {Dmel: FBgn0266671, Sec6, Secretory 6, [RH, Score=243, Expect=3e-69]} {Celegans: WBGene00017284, sec-6, Exocyst complex component 3, [RH, Score=241, Expect=2e-68]} {Smed: dd_Smed_v6_3480_0_8, dd_Smed_v6_3480_0_8, [RH, Score=194, Expect=3e-52]} {RNA1509_8752} {RNA1310_3603} {RNA815_2515}

Cumulative graph for MligTC455_48238

Region-enriched expression

Region	logFC	logCPM	Pvalue	FDR	Specificity
RegionR1	-1.288	3.35	0.39604	1.00000
RegionR2	0.527	3.35	0.48909	0.87130
RegionR3	0.87	3.35	0.09858	0.55064
RegionR4	-0.223	3.35	0.73958	1.00000
RegionR5	1.098	3.35	0.02133	0.10155
RegionR6	0.763	3.35	0.18026	0.74396
RegionR7	-0.676	3.35	0.37675	1.00000
RegionR8	-1.072	3.35	0.24594	0.86321

Regeneration-enriched expression

Region	logFC	logCPM	PValue	FDR	Specificity
RegenerationR1	-4.569	3.35	0.42403	1.00000
RegenerationR2	0.082	3.35	0.90438	1.00000
RegenerationR3	0.389	3.35	0.55358	0.88567
RegenerationR4	0.13	3.35	0.85406	1.00000
RegenerationR5	-0.027	3.35	0.96818	1.00000
RegenerationR6	0.279	3.35	0.66508	0.90613
RegenerationBL	0.522	3.35	0.55881	0.91406
RegenerationTP	1.4	3.35	0.11986	0.52885

Genes with expression patterns similar to MligTC455_48238

Nr.	Cluster	Total UMI counts	Global CPM	Transcripts	Categories	Human homolog	Σ Spearman correlations	Int1	Int2	Int3	Reg1	Reg2	Reg3	Annotation
1.	MligTC455_48238	341	7.11	Mlig455_064342	Neo: - Age: -	EXOC3	6	1.000	1.000	1.000	1.000	1.000	1.000	Mlig455_064342 {REF} {Length: 4793} {Pfam: Exocyst complex component Sec6 [PF06046.15, score=220.4]; Autophagy protein ATG17-like domain [PF04108.14, score=22.6]} {Human: ENSG00000180104, EXOC3, exocyst complex component 3, [RH, Score=269, Expect=1e-78]} {Mouse: ENSMUSG00000034152, Exoc3, exocyst complex component 3, [RH, Score=267, Expect=4e-78]} {Dmel: FBgn0266671, Sec6, Secretory 6, [RH, Score=243, Expect=3e-69]} {Celegans: WBGene00017284, sec-6, Exocyst complex component 3, [RH, Score=241, Expect=2e-68]} {Smed: dd_Smed_v6_3480_0_8, dd_Smed_v6_3480_0_8, [RH, Score=194, Expect=3e-52]} {RNA1509_8752} {RNA1310_3603} {RNA815_2515}
2.	MligTC455_48236	337	7.02	Mlig455_019061	Neo: - Age: Up-Up-Down	EXOC3	5.881	0.998	0.992	1.000	0.992	0.906	0.993	Mlig455_019061 {REF} {Length: 3604} {Pfam: Exocyst complex component Sec6 [PF06046.15, score=215.1]; Autophagy protein ATG17-like domain [PF04108.14, score=20.6]} {Human: ENSG00000180104, EXOC3, exocyst complex component 3, [RH, Score=266, Expect=2e-77]} {Mouse: ENSMUSG00000034152, Exoc3, exocyst complex component 3, [RH, Score=265, Expect=3e-77]} {Dmel: FBgn0266671, Sec6, Secretory 6, [RH, Score=239, Expect=3e-68]} {Celegans: WBGene00017284, sec-6, Exocyst complex component 3, [RH, Score=239, Expect=5e-68]} {Smed: dd_Smed_v6_3480_0_8, dd_Smed_v6_3480_0_8, [RH, Score=192, Expect=8e-52]} {RNA1509_8752} {RNA1310_3603} {RNA815_2515}
3.	MligTC455_28576	165	3.44	Mlig455_007893	Neo: - Age: Down-Up-Down	NFYC	0.971	-	-	0.971	-	-	-	Mlig455_007893 {REF} {Length: 3192} {Pfam: Histone-like transcription factor (CBF/NF-Y) and archaeal histone [PF00808.25, score=53.8]; Core histone H2A/H2B/H3/H4 [PF00125.26, score=45.4]} {Human: ENSG00000066136, NFYC, nuclear transcription factor Y subunit gamma, [RH, Score=147, Expect=8e-39]} {Mouse: ENSMUSG00000032897, Nfyc, nuclear transcription factor-Y gamma, [RH, Score=146, Expect=2e-39]} {Dmel: FBgn0029905, Nf-YC, Nuclear factor Y-box C, [RH, Score=135, Expect=4e-34]} {Celegans: WBGene00017742, nfyc-1, Nuclear transcription factor Y subunit gamma, [RH, Score=103, Expect=5e-25]} {Smed: dd_Smed_v6_5610_0_1, dd_Smed_v6_5610_0_1, [Score=166, Expect=4e-47]} {RNA1509_12703} {RNA1310_30593} {RNA815_29147}
4.	MligTC455_22386	344	7.17	Mlig455_010779	Neo: - Age: -		0.967	-	-	-	-	-	0.967	Mlig455_010779 {REF} {Length: 3500} {Pfam: Leucine Rich repeat [PF13516.8, score=32.8]} {Mouse: ENSMUSG00000025226, Fbxl15, F-box and leucine-rich repeat protein 15, [Score=48.5, Expect=1e-05]} {RNA1509_55784} {RNA1310_6660.1} {RNA815_11523}
5.	MligTC455_14558	332	6.93	Mlig455_069112	Neo: - Age: Down-Up-Down	ETFRF1	0.956	-	-	-	0.956	-	-	Mlig455_069112 {REF} {Length: 2209} {TRANSSPLICED} {Pfam: Complex 1 protein (LYR family) [PF05347.17, score=40.9]; Complex1_LYR-like [PF13233.8, score=27.6]} {Human: ENSG00000205707, ETFRF1, electron transfer flavoprotein regulatory factor 1, [RH, Score=98.2, Expect=1e-27]} {Mouse: ENSMUSG00000040370, Etfrf1, electron transfer flavoprotein regulatory factor 1, [RH, Score=119, Expect=5e-36]} {Dmel: FBgn0040985, CG6115, [RH, Score=75.5, Expect=4e-19]} {Celegans: WBGene00012780, Y42A5A.5, [RH, Score=115, Expect=8e-35]} {RNA1509_29278, RNA1509_31931, RNA1509_36282, RNA1509_51380} {RNA1310_65323, RNA1509_29278, RNA1509_31931, RNA1509_36282, RNA1509_51380} {RNA1509_29278, RNA1509_31931, RNA1509_36282, RNA1509_51380, RNA815_18968.1}
6.	MligTC455_04366	654	13.63	Mlig455_052829	Neo: - Age: -	UPF2	0.95	-	-	-	-	-	0.950	Mlig455_052829 {REF} {Length: 4197} {TRANSSPLICED} {Pfam: MIF4G domain [PF02854.21, score=172.7]; Up-frameshift suppressor 2 [PF04050.16, score=29.1]} {Human: ENSG00000151461, UPF2, UPF2, regulator of nonsense mediated mRNA decay, [Score=651, Expect=0.0]} {Mouse: ENSMUSG00000043241, Upf2, UPF2 regulator of nonsense transcripts homolog (yeast), [Score=659, Expect=0.0]} {Dmel: FBgn0029992, Upf2, [Score=569, Expect=0.0]} {Celegans: WBGene00004881, smg-3, SMG-3; Suppressor with Morphological effect on Genitalia, [RH, Score=328, Expect=5e-94]} {Smed: dd_Smed_v6_7696_0_1, dd_Smed_v6_7696_0_1, [RH, Score=541, Expect=3e-172]} {RNA1509_10414} {RNA1310_2087} {RNA815_4700.1}

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