Data search
Results for MligTC455_28576
| Cluster | Total UMI counts | Global CPM | Transcripts | Categories | Human homolog | Annotation |
|---|---|---|---|---|---|---|
| MligTC455_28576 | 165 | 3.44 | Mlig455_007893 | Neo: - Age: Down-Up-Down |
NFYC | Mlig455_007893 {REF} {Length: 3192} {Pfam: Histone-like transcription factor (CBF/NF-Y) and archaeal histone [PF00808.25, score=53.8]; Core histone H2A/H2B/H3/H4 [PF00125.26, score=45.4]} {Human: ENSG00000066136, NFYC, nuclear transcription factor Y subunit gamma, [RH, Score=147, Expect=8e-39]} {Mouse: ENSMUSG00000032897, Nfyc, nuclear transcription factor-Y gamma, [RH, Score=146, Expect=2e-39]} {Dmel: FBgn0029905, Nf-YC, Nuclear factor Y-box C, [RH, Score=135, Expect=4e-34]} {Celegans: WBGene00017742, nfyc-1, Nuclear transcription factor Y subunit gamma, [RH, Score=103, Expect=5e-25]} {Smed: dd_Smed_v6_5610_0_1, dd_Smed_v6_5610_0_1, [Score=166, Expect=4e-47]} {RNA1509_12703} {RNA1310_30593} {RNA815_29147} |
Cumulative graph for MligTC455_28576
Region-enriched expression
| Region | logFC | logCPM | Pvalue | FDR | Specificity |
|---|---|---|---|---|---|
| RegionR1 | 0.991 | 2.457 | 0.57864 | 1.00000 | |
| RegionR2 | 0.184 | 2.457 | 0.81478 | 1.00000 | |
| RegionR3 | -0.667 | 2.457 | 0.31739 | 0.85584 | |
| RegionR4 | -0.503 | 2.457 | 0.54162 | 0.86372 | |
| RegionR5 | 0.859 | 2.457 | 0.09744 | 0.29979 | |
| RegionR6 | 0.409 | 2.457 | 0.50944 | 1.00000 | |
| RegionR7 | -0.147 | 2.457 | 0.87453 | 1.00000 | |
| RegionR8 | -1.127 | 2.457 | 0.39283 | 1.00000 |
Regeneration-enriched expression
| Region | logFC | logCPM | PValue | FDR | Specificity |
|---|---|---|---|---|---|
| RegenerationR1 | -5.667 | 2.457 | 0.28568 | 0.98462 | |
| RegenerationR2 | 0.196 | 2.457 | 0.72757 | 0.96484 | |
| RegenerationR3 | 0.308 | 2.457 | 0.67744 | 0.93962 | |
| RegenerationR4 | 0.52 | 2.457 | 0.49244 | 0.86564 | |
| RegenerationR5 | 0.456 | 2.457 | 0.41273 | 0.80752 | |
| RegenerationR6 | 0.224 | 2.457 | 0.73630 | 0.94534 | |
| RegenerationBL | 0.996 | 2.457 | 0.26585 | 0.62459 | |
| RegenerationTP | 0.478 | 2.457 | 0.66814 | 0.99892 |
Genes with expression patterns similar to MligTC455_28576
| Nr. | Cluster | Total UMI counts | Global CPM | Transcripts | Categories | Human homolog | Σ Spearman correlations | Int1 | Int2 | Int3 | Reg1 | Reg2 | Reg3 | Annotation |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1. | MligTC455_28576 | 165 | 3.44 | Mlig455_007893 | Neo: - Age: Down-Up-Down |
NFYC | 6 | 1.000 | 1.000 | 1.000 | 1.000 | 1.000 | 1.000 | Mlig455_007893 {REF} {Length: 3192} {Pfam: Histone-like transcription factor (CBF/NF-Y) and archaeal histone [PF00808.25, score=53.8]; Core histone H2A/H2B/H3/H4 [PF00125.26, score=45.4]} {Human: ENSG00000066136, NFYC, nuclear transcription factor Y subunit gamma, [RH, Score=147, Expect=8e-39]} {Mouse: ENSMUSG00000032897, Nfyc, nuclear transcription factor-Y gamma, [RH, Score=146, Expect=2e-39]} {Dmel: FBgn0029905, Nf-YC, Nuclear factor Y-box C, [RH, Score=135, Expect=4e-34]} {Celegans: WBGene00017742, nfyc-1, Nuclear transcription factor Y subunit gamma, [RH, Score=103, Expect=5e-25]} {Smed: dd_Smed_v6_5610_0_1, dd_Smed_v6_5610_0_1, [Score=166, Expect=4e-47]} {RNA1509_12703} {RNA1310_30593} {RNA815_29147} |
| 2. | MligTC455_42051 | 302 | 6.3 | Mlig455_044195 | Neo: - Age: - |
SLC12A8 | 1.801 | - | - | - | 0.847 | - | 0.954 | Mlig455_044195 {REF} {Length: 3369} {TRANSSPLICED} {Pfam: Amino acid permease [PF00324.23, score=139.8]} {Human: ENSG00000221955, SLC12A8, solute carrier family 12 member 8, [RH, Score=321, Expect=6e-100]} {Mouse: ENSMUSG00000035506, Slc12a8, solute carrier family 12 (potassium/chloride transporters), member 8, [RH, Score=315, Expect=6e-98]} {Dmel: FBgn0024365, CG12773, [Score=418, Expect=8e-138]} {Celegans: WBGene00017350, F10E7.9, [RH, Score=338, Expect=4e-108]} {Smed: dd_Smed_v6_8108_0_1, dd_Smed_v6_8108_0_1, [RH, Score=425, Expect=3e-141]} {RNA1509_48906, RNA1509_55676} {RNA1310_21016.1, RNA1509_55676} {RNA1509_55676, RNA815_8485} |
| 3. | MligTC455_53432 | 952 | 19.83 | Mlig455_047461 | Neo: - Age: Down-Up-Up, logFC(26M/2M)=0.306 Region-enriched R5: 1.698/0.00082 |
LMO4 | 1.719 | - | - | - | 0.766 | - | 0.953 | Mlig455_047461 {REF} {Length: 1824} {Pfam: LIM domain [PF00412.24, score=91.0]} {Human: ENSG00000143013, LMO4, LIM domain only 4, [Score=133, Expect=2e-38]} {Mouse: ENSMUSG00000028266, Lmo4, LIM domain only 4, [Score=133, Expect=2e-38]} {Dmel: FBgn0032196, CG5708, [Score=115, Expect=9e-31]} {Celegans: WBGene00006654, ttx-3, LIM/homeobox protein ttx-3, [Score=71.2, Expect=6e-14]} {Smed: dd_Smed_v6_27625_0_1, dd_Smed_v6_27625_0_1, [Score=99.4, Expect=5e-25]} {RNA1509_7368} {RNA1310_20349.1} {RNA815_4654.1} |
| 4. | MligTC455_50309 | 756 | 15.76 | Mlig455_009133 | Neo: Irradiation Age: logFC(26M/2M)=0.305 |
SLC26A5 | 1.677 | - | - | - | - | 0.727 | 0.950 | Mlig455_009133 {REF} {Length: 7468} {TRANSSPLICED} {Pfam: Sulfate permease family [PF00916.22, score=347.9]; STAS domain [PF01740.23, score=95.6]} {Human: ENSG00000170615, SLC26A5, solute carrier family 26 member 5, [RH, Score=433, Expect=1e-139]} {Mouse: ENSMUSG00000029015, Slc26a5, solute carrier family 26, member 5, [RH, Score=444, Expect=8e-144]} {Dmel: FBgn0036770, Prestin, [RH, Score=363, Expect=3e-113]} {Celegans: WBGene00020914, sulp-6, SULfate Permease family, [RH, Score=375, Expect=5e-117]} {Smed: dd_Smed_v6_4250_0_2, dd_Smed_v6_4250_0_2, [Score=470, Expect=3e-154]} {RNA1509_33426, RNA1509_33898, RNA1509_9370} {RNA1310_7265, RNA1509_33426, RNA1509_33898, RNA1509_9370} {RNA1509_33426, RNA1509_33898, RNA1509_9370, RNA815_2295} |
| 5. | MligTC455_42662 | 405 | 8.44 | Mlig455_046348 | Neo: - Age: - Region-enriched R5: 1.217/0.00287 |
1.66 | - | - | - | - | 0.710 | 0.950 | Mlig455_046348 {REF} {Length: 1982} {TRANSSPLICED} {Smed: dd_Smed_v6_4953_0_1, dd_Smed_v6_4953_0_1, [Score=48.5, Expect=1e-07]} {RNA1509_20451} {RNA1310_21505, RNA1509_20451} {RNA1509_20451, RNA815_14868} | |
| 6. | MligTC455_46852 | 669 | 13.95 | Mlig455_000973 | Neo: - Age: logFC(26M/2M)=0.296 Region-enriched R5: 1.717/0.00000 |
0.975 | - | - | - | - | - | 0.975 | Mlig455_000973 {REF} {Length: 2358} {TRANSSPLICED} {Pfam: ATP synthase E chain [PF05680.14, score=51.6]} {Smed: dd_Smed_v6_943_0_1, dd_Smed_v6_943_0_1, [RH, Score=61.2, Expect=6e-12]} {RNA1509_48439} {RNA1310_23642, RNA1509_48439} {RNA1509_48439, RNA815_5620.1} | |
| 7. | MligTC455_49232 | 695 | 14.48 | Mlig455_047348 | Neo: Irradiation Age: Up-Down-Down |
PRKAG1 | 0.975 | - | - | - | - | - | 0.975 | Mlig455_047348 {REF} {Length: 6342} {Pfam: CBS domain [PF00571.30, score=99.7]} {Human: ENSG00000181929, PRKAG1, protein kinase AMP-activated non-catalytic subunit gamma 1, [RH, Score=379, Expect=5e-125]; ENSG00000106617, PRKAG2, protein kinase AMP-activated non-catalytic subunit gamma 2, [RH, Score=370, Expect=2e-118]} {Mouse: ENSMUSG00000067713, Prkag1, protein kinase, AMP-activated, gamma 1 non-catalytic subunit, [RH, Score=379, Expect=6e-125]; ENSMUSG00000028944, Prkag2, protein kinase, AMP-activated, gamma 2 non-catalytic subunit, [RH, Score=371, Expect=1e-118]} {Dmel: FBgn0264357, SNF4Agamma, SNF4/AMP-activated protein kinase gamma subunit, [RH, Score=402, Expect=6e-123]} {Celegans: WBGene00013732, aakg-1, AMP-Activated protein Kinase Gamma subunit, [RH, Score=345, Expect=1e-106]} {Smed: dd_Smed_v6_4877_0_1, dd_Smed_v6_4877_0_1, [RH, Score=317, Expect=4e-101]} {RNA1509_27693, RNA1509_35401, RNA1509_39318, RNA1509_47295, RNA1509_7168} {RNA1310_6732.1, RNA1509_27693, RNA1509_35401, RNA1509_39318, RNA1509_47295, RNA1509_7168} {RNA1509_27693, RNA1509_35401, RNA1509_39318, RNA1509_47295, RNA1509_7168, RNA815_8244.1} |
| 8. | MligTC455_49233 | 685 | 14.27 | Mlig455_069309 | Neo: Irradiation Age: Up-Up-Down |
PRKAG1 | 0.973 | - | - | - | - | - | 0.973 | Mlig455_069309 {REF} {Length: 4161} {Pfam: CBS domain [PF00571.30, score=40.6]} {Human: ENSG00000181929, PRKAG1, protein kinase AMP-activated non-catalytic subunit gamma 1, [Score=251, Expect=1e-76]; ENSG00000106617, PRKAG2, protein kinase AMP-activated non-catalytic subunit gamma 2, [Score=248, Expect=8e-73]} {Mouse: ENSMUSG00000067713, Prkag1, protein kinase, AMP-activated, gamma 1 non-catalytic subunit, [Score=251, Expect=1e-76]; ENSMUSG00000028944, Prkag2, protein kinase, AMP-activated, gamma 2 non-catalytic subunit, [Score=247, Expect=2e-72]} {Dmel: FBgn0264357, SNF4Agamma, SNF4/AMP-activated protein kinase gamma subunit, [Score=276, Expect=7e-83]} {Celegans: WBGene00013732, aakg-1, AMP-Activated protein Kinase Gamma subunit, [Score=220, Expect=1e-63]} {Smed: dd_Smed_v6_4877_0_1, dd_Smed_v6_4877_0_1, [Score=205, Expect=2e-59]} {RNA1509_13211} {RNA1310_6732.1, RNA1509_13211} {RNA1509_13211, RNA815_8244.1} |
| 9. | MligTC455_46119 | 436 | 9.08 | Mlig455_049511 | Neo: - Age: - |
ARPC5 | 0.971 | - | - | - | - | - | 0.971 | Mlig455_049511 {REF} {Length: 3235} {TRANSSPLICED} {Pfam: ARP2/3 complex 16 kDa subunit (p16-Arc) [PF04699.16, score=101.7]} {Human: ENSG00000162704, ARPC5, actin related protein 2/3 complex subunit 5, [Score=100, Expect=3e-24]} {Mouse: ENSMUSG00000008475, Arpc5, actin related protein 2/3 complex, subunit 5, [Score=99.4, Expect=5e-24]} {Dmel: FBgn0031437, Arpc5, Actin-related protein 2/3 complex, subunit 5, [Score=103, Expect=1e-25]} {Smed: dd_Smed_v6_781_0_1, dd_Smed_v6_781_0_1, [Score=80.1, Expect=1e-17]} {RNA1509_17990} {RNA1310_17080} {RNA815_4362.1} |
| 10. | MligTC455_48236 | 337 | 7.02 | Mlig455_019061 | Neo: - Age: Up-Up-Down |
EXOC3 | 0.971 | - | - | 0.971 | - | - | - | Mlig455_019061 {REF} {Length: 3604} {Pfam: Exocyst complex component Sec6 [PF06046.15, score=215.1]; Autophagy protein ATG17-like domain [PF04108.14, score=20.6]} {Human: ENSG00000180104, EXOC3, exocyst complex component 3, [RH, Score=266, Expect=2e-77]} {Mouse: ENSMUSG00000034152, Exoc3, exocyst complex component 3, [RH, Score=265, Expect=3e-77]} {Dmel: FBgn0266671, Sec6, Secretory 6, [RH, Score=239, Expect=3e-68]} {Celegans: WBGene00017284, sec-6, Exocyst complex component 3, [RH, Score=239, Expect=5e-68]} {Smed: dd_Smed_v6_3480_0_8, dd_Smed_v6_3480_0_8, [RH, Score=192, Expect=8e-52]} {RNA1509_8752} {RNA1310_3603} {RNA815_2515} |
| 11. | MligTC455_48238 | 341 | 7.11 | Mlig455_064342 | Neo: - Age: - |
EXOC3 | 0.971 | - | - | 0.971 | - | - | - | Mlig455_064342 {REF} {Length: 4793} {Pfam: Exocyst complex component Sec6 [PF06046.15, score=220.4]; Autophagy protein ATG17-like domain [PF04108.14, score=22.6]} {Human: ENSG00000180104, EXOC3, exocyst complex component 3, [RH, Score=269, Expect=1e-78]} {Mouse: ENSMUSG00000034152, Exoc3, exocyst complex component 3, [RH, Score=267, Expect=4e-78]} {Dmel: FBgn0266671, Sec6, Secretory 6, [RH, Score=243, Expect=3e-69]} {Celegans: WBGene00017284, sec-6, Exocyst complex component 3, [RH, Score=241, Expect=2e-68]} {Smed: dd_Smed_v6_3480_0_8, dd_Smed_v6_3480_0_8, [RH, Score=194, Expect=3e-52]} {RNA1509_8752} {RNA1310_3603} {RNA815_2515} |
| 12. | MligTC455_24182 | 264 | 5.5 | Mlig455_017805 | Neo: - Age: - |
CYB561 | 0.968 | - | - | - | - | - | 0.968 | Mlig455_017805 {REF} {Length: 2962} {TRANSSPLICED} {Pfam: Eukaryotic cytochrome b561 [PF03188.18, score=143.4]} {Human: ENSG00000008283, CYB561, cytochrome b561, [Score=167, Expect=1e-50]} {Mouse: ENSMUSG00000019590, Cyb561, cytochrome b-561, [Score=162, Expect=1e-48]} {Dmel: FBgn0035321, CG1275, [RH, Score=194, Expect=2e-60]} {Celegans: WBGene00010131, F55H2.5, Putative cytochrome b561, [RH, Score=169, Expect=1e-51]} {Smed: dd_Smed_v6_4017_0_1, dd_Smed_v6_4017_0_1, [RH, Score=194, Expect=6e-62]} {RNA1509_27008, RNA1509_34879, RNA1509_39869, RNA1509_47903} {RNA1310_22448.1, RNA1509_27008, RNA1509_34879, RNA1509_39869, RNA1509_47903} {RNA1509_27008, RNA1509_34879, RNA1509_39869, RNA1509_47903, RNA815_13718} |
| 13. | MligTC455_12864 | 499 | 10.4 | Mlig455_004368 | Neo: Irradiation Age: logFC(26M/2M)=0.334 Region-enriched R5: 1.078/0.02209 |
0.961 | - | - | - | - | - | 0.961 | Mlig455_004368 {REF} {Length: 1837} {TRANSSPLICED} {Pfam: Immunoglobulin domain [PF13927.8, score=26.6]; Immunoglobulin domain [PF13895.8, score=23.3]} {RNA1509_37987, RNA1509_39974} {RNA1310_51955, RNA1509_37987, RNA1509_39974} {RNA1509_37987, RNA1509_39974, RNA815_29559} | |
| 14. | MligTC455_43922 | 694 | 14.47 | Mlig455_059321, Mlig455_065180 | Neo: Int S/G2/M Age: - |
TAF3 | 0.957 | - | - | - | - | 0.957 | - | Mlig455_059321 {REF} {Length: 5566} {TRANSSPLICED} {Pfam: Bromodomain associated [PF07524.15, score=27.0]} {RNA1509_28109} {RNA1310_11721} {RNA815_37896} Mlig455_065180 {REF} {Length: 5621} {TRANSSPLICED} {Pfam: PHD-finger [PF00628.31, score=43.2]; Bromodomain associated [PF07524.15, score=25.6]; PHD-finger [PF13831.8, score=22.4]} {Human: ENSG00000165632, TAF3, TATA-box binding protein associated factor 3, [RH, Score=94.7, Expect=4e-19]} {Mouse: ENSMUSG00000025782, Taf3, TATA-box binding protein associated factor 3, [RH, Score=95.5, Expect=1e-19]} {Dmel: FBgn0026262, bip2, [RH, Score=90.9, Expect=3e-18]} {Smed: dd_Smed_v6_8419_0_1, dd_Smed_v6_8419_0_1, [RH, Score=95.1, Expect=1e-19]} {RNA1509_23746, RNA1509_28109, RNA1509_51079, RNA1509_58746} {RNA1310_11721, RNA1509_23746, RNA1509_28109, RNA1509_51079, RNA1509_58746} {RNA1509_23746, RNA1509_28109, RNA1509_51079, RNA1509_58746, RNA815_37896} |
| 15. | MligTC455_48833 | 702 | 14.62 | Mlig455_006923, Mlig455_017937 | Neo: - Age: - Region-enriched R5: 1.677/0.02053 |
RNF2 | 0.954 | - | - | - | - | - | 0.954 | Mlig455_006923 {REF} {Length: 2956} {TRANSSPLICED} {Pfam: Zinc finger, C3HC4 type (RING finger) [PF13923.8, score=53.5]; RAWUL domain RING finger- and WD40-associated ubiquitin-like [PF16207.7, score=40.8]; Zinc finger, C3HC4 type (RING finger) [PF00097.27, score=35.9]; Ring finger domain [PF13639.8, score=32.7]; Zinc finger, C3HC4 type (RING finger) [PF13920.8, score=27.2]; RING-type zinc-finger [PF13445.8, score=22.4]; zinc-RING finger domain [PF14634.8, score=20.2]; zinc finger of C3HC4-type, RING [PF15227.8, score=20.1]; Zinc-finger of the MIZ type in Nse subunit [PF11789.10, score=19.4]} {Human: ENSG00000121481, RNF2, ring finger protein 2, [RH, Score=252, Expect=1e-80]} {Mouse: ENSMUSG00000026484, Rnf2, ring finger protein 2, [RH, Score=252, Expect=9e-81]; ENSMUSG00000024325, Ring1, ring finger protein 1, [RH, Score=242, Expect=6e-76]} {Dmel: FBgn0003330, Sce, Sex combs extra, [RH, Score=226, Expect=9e-70]} {Celegans: WBGene00020496, spat-3, Suppressor of PAr-Two defect, [RH, Score=82.8, Expect=9e-17]} {Smed: dd_Smed_v6_8989_0_1, dd_Smed_v6_8989_0_1, [RH, Score=191, Expect=2e-56]} {RNA1509_26957} {RNA1310_17990, RNA1509_26957} {RNA1509_26957, RNA815_16348} Mlig455_017937 {REF} {Length: 2921} {TRANSSPLICED} {Pfam: Zinc finger, C3HC4 type (RING finger) [PF13923.8, score=53.5]; RAWUL domain RING finger- and WD40-associated ubiquitin-like [PF16207.7, score=40.8]; Zinc finger, C3HC4 type (RING finger) [PF00097.27, score=35.9]; Ring finger domain [PF13639.8, score=32.7]; Zinc finger, C3HC4 type (RING finger) [PF13920.8, score=27.2]; RING-type zinc-finger [PF13445.8, score=22.4]; zinc-RING finger domain [PF14634.8, score=20.2]; zinc finger of C3HC4-type, RING [PF15227.8, score=20.1]; Zinc-finger of the MIZ type in Nse subunit [PF11789.10, score=19.4]} {Human: ENSG00000121481, RNF2, ring finger protein 2, [RH, Score=252, Expect=1e-80]} {Mouse: ENSMUSG00000026484, Rnf2, ring finger protein 2, [RH, Score=252, Expect=9e-81]; ENSMUSG00000024325, Ring1, ring finger protein 1, [RH, Score=242, Expect=6e-76]} {Dmel: FBgn0003330, Sce, Sex combs extra, [RH, Score=226, Expect=9e-70]} {Celegans: WBGene00020496, spat-3, Suppressor of PAr-Two defect, [RH, Score=82.8, Expect=9e-17]} {Smed: dd_Smed_v6_8989_0_1, dd_Smed_v6_8989_0_1, [RH, Score=191, Expect=2e-56]} {RNA1509_26957} {RNA1310_17990} {RNA815_16348} |
| 16. | MligTC455_53077 | 1895 | 39.47 | Mlig455_009212, Mlig455_009635, Mlig455_037097 | Neo: - Age: - Region-enriched R5: 1.482/0.00047 |
0.953 | - | - | - | - | - | 0.953 | Mlig455_009212 {REF} {Length: 2731} {TRANSSPLICED} {Pfam: PH domain [PF00169.31, score=41.5]} {RNA1509_25209} {RNA1310_25730} {RNA815_12499} Mlig455_009635 {REF} {Length: 2536} {TRANSSPLICED} {Pfam: PH domain [PF00169.31, score=42.0]} {RNA1509_50862} {RNA1310_27448.1} {RNA815_12499} Mlig455_037097 {REF} {Length: 2843} {TRANSSPLICED} {Pfam: PH domain [PF00169.31, score=41.5]} {RNA1509_25209, RNA1509_50862} {RNA1310_25730, RNA1509_25209, RNA1509_50862} {RNA1509_25209, RNA1509_50862, RNA815_8626.1} |
|
| 17. | MligTC455_44569 | 311 | 6.48 | Mlig455_050289 | Neo: - Age: Down-Up-Down |
PARL | 0.952 | - | - | - | - | - | 0.952 | Mlig455_050289 {REF} {Length: 2352} {TRANSSPLICED} {Pfam: Rhomboid family [PF01694.24, score=30.8]} {Human: ENSG00000175193, PARL, presenilin associated rhomboid like, [Score=48.9, Expect=8e-06]} {Mouse: ENSMUSG00000033918, Parl, presenilin associated, rhomboid-like, [Score=49.7, Expect=4e-06]} {RNA1509_23398, RNA1509_32773, RNA1509_55819} {RNA1310_18994.1, RNA1509_23398, RNA1509_55819} {RNA1509_23398, RNA1509_55819, RNA815_19436} |
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