TomoSeq data search

Data search

Results for MligTC455_48321

Cluster	Total UMI counts	Global CPM	Transcripts	Categories	Human homolog	Annotation
MligTC455_48321	205	4.28	Mlig455_008933	Neo: - Age: - Region-enriched R3: 4.378/0.00001	TOB1	Mlig455_008933 {REF} {Length: 777} {Pfam: BTG family [PF07742.14, score=60.8]} {Human: ENSG00000141232, TOB1, transducer of ERBB2, 1, [Score=62.8, Expect=2e-11]} {Mouse: ENSMUSG00000037573, Tob1, transducer of ErbB-2.1, [Score=61.2, Expect=3e-11]} {Dmel: FBgn0028397, Tob, [Score=65.5, Expect=8e-13]} {Smed: dd_Smed_v6_7444_0_1, dd_Smed_v6_7444_0_1, [Score=73.9, Expect=3e-16]} {RNA1509_59615} {RNA1310_49803}

Cluster

Total UMI counts

Global CPM

Transcripts

Cumulative graph for MligTC455_48321

Region-enriched expression

Region	logFC	logCPM	Pvalue	FDR
RegionR1	-5.64	2.808	0.99955	1.00000
RegionR2	3.317	2.808	0.00482	0.06268
RegionR3	4.378	2.808	0.00000	0.00001
RegionR4	1.899	2.808	0.07984	0.26453
RegionR5	-0.122	2.808	0.79273	1.00000
RegionR6	0.115	2.808	0.72642	1.00000
RegionR7	0.899	2.808	0.48369	1.00000
RegionR8	-4.847	2.808	0.99977	1.00000

Regeneration-enriched expression

Region	logFC	logCPM	PValue	FDR
RegenerationR1	5.709	2.808	0.24514	0.96633
RegenerationR2	-0.514	2.808	0.38074	0.80190
RegenerationR3	-0.545	2.808	0.38326	0.79180
RegenerationR4	-0.599	2.808	0.45194	0.84318
RegenerationR5	-0.481	2.808	0.62004	0.91902
RegenerationR6	0.137	2.808	0.86970	1.00000
RegenerationBL	1.028	2.808	0.52184	0.88314
RegenerationTP	-2.592	2.808	0.99965	1.00000

Genes with expression patterns similar to MligTC455_48321

Nr.	Cluster	Total UMI counts	Global CPM	Transcripts	Categories	Human homolog	Σ Spearman correlations	Int1	Int2	Int3	Reg1	Reg2	Reg3	Annotation
1.	MligTC455_48321	205	4.28	Mlig455_008933	Neo: - Age: - Region-enriched R3: 4.378/0.00001	TOB1	6	1.000	1.000	1.000	1.000	1.000	1.000	Mlig455_008933 {REF} {Length: 777} {Pfam: BTG family [PF07742.14, score=60.8]} {Human: ENSG00000141232, TOB1, transducer of ERBB2, 1, [Score=62.8, Expect=2e-11]} {Mouse: ENSMUSG00000037573, Tob1, transducer of ErbB-2.1, [Score=61.2, Expect=3e-11]} {Dmel: FBgn0028397, Tob, [Score=65.5, Expect=8e-13]} {Smed: dd_Smed_v6_7444_0_1, dd_Smed_v6_7444_0_1, [Score=73.9, Expect=3e-16]} {RNA1509_59615} {RNA1310_49803}
2.	MligTC455_49929	76	1.59	Mlig455_001249, Mlig455_001253	Neo: - Age: Down-Up-Up		3.499	-	-	0.953	0.841	0.837	0.868	Mlig455_001249 {REF} {Length: 984} {RNA1310_33799.1} {RNA815_47109} Mlig455_001253 {REF} {Length: 1260} {RNA1310_33799.1} {RNA815_45980}
3.	MligTC455_46760	3368	70.16	Mlig455_000096	Neo: - Age: -	SLC1A2	2.621	-	0.860	-	-	0.977	0.784	Mlig455_000096 {REF} {Length: 3406} {Pfam: Sodium:dicarboxylate symporter family [PF00375.20, score=428.1]} {Human: ENSG00000110436, SLC1A2, solute carrier family 1 member 2, [RH, Score=535, Expect=0.0]} {Mouse: ENSMUSG00000005089, Slc1a2, solute carrier family 1 (glial high affinity glutamate transporter), member 2, [RH, Score=547, Expect=0.0]} {Dmel: FBgn0026439, Eaat1, Excitatory amino acid transporter 1, [RH, Score=382, Expect=6e-127]} {Celegans: WBGene00001620, glt-1, Excitatory amino acid transporter, [RH, Score=530, Expect=0.0]} {Smed: dd_Smed_v6_7570_0_1, dd_Smed_v6_7570_0_1, [RH, Score=607, Expect=0.0]} {RNA1509_2356, RNA1509_47494} {RNA1310_5021.1, RNA1509_2356, RNA1509_47494} {RNA1509_2356, RNA1509_47494, RNA815_1444.1}
4.	MligTC455_36995	217	4.52	Mlig455_040359	Neo: - Age: Down-Up-Up Region-enriched R2: 6.534/0.00155 Region-enriched R3: 5.197/0.00130		2.614	-	-	0.974	-	0.776	0.864	Mlig455_040359 {REF} {Length: 759} {RNA1509_59636} {RNA1310_6145.1, RNA1509_59636} {RNA1509_59636, RNA815_27612}
5.	MligTC455_37338	40	0.84	Mlig455_035280	Neo: - Age: -		2.596	-	-	0.954	-	0.811	0.831	Mlig455_035280 {REF} {Length: 2442} {RNA1310_17149} {RNA815_15957}
6.	MligTC455_43193	359	7.49	Mlig455_033211	Neo: - Age: -		2.54	-	-	0.954	-	0.770	0.816	Mlig455_033211 {REF} {Length: 280} {NoTransDecoderORF} {RNA1310_121983}
7.	MligTC455_15805	9	0.19	Mlig455_023117	Neo: - Age: -	KCNK18	2.528	-	-	0.950	0.783	0.795	-	Mlig455_023117 {REF} {Length: 1703} {Pfam: Ion channel [PF07885.18, score=119.1]} {Human: ENSG00000186795, KCNK18, potassium two pore domain channel subfamily K member 18, [Score=101, Expect=6e-23]; ENSG00000100433, KCNK10, potassium two pore domain channel subfamily K member 10, [Score=96.3, Expect=1e-20]} {Mouse: ENSMUSG00000040901, Kcnk18, potassium channel, subfamily K, member 18, [Score=103, Expect=7e-24]} {Dmel: FBgn0085425, CG34396, [Score=155, Expect=3e-40]} {Celegans: WBGene00010784, twk-48, TWiK family of potassium channels, [Score=155, Expect=1e-42]} {Smed: dd_Smed_v6_17586_0_1, dd_Smed_v6_17586_0_1, [Score=338, Expect=1e-112]} {RNA1310_118169}
8.	MligTC455_13098	19	0.4	Mlig455_020992	Neo: - Age: -	C1GALT1	2.52	-	-	0.955	-	0.733	0.832	Mlig455_020992 {REF} {Length: 1108} {Pfam: Galactosyltransferase [PF01762.23, score=27.6]} {Human: ENSG00000106392, C1GALT1, core 1 synthase, glycoprotein-N-acetylgalactosamine 3-beta-galactosyltransferase 1, [Score=160, Expect=3e-46]} {Mouse: ENSMUSG00000042460, C1galt1, core 1 synthase, glycoprotein-N-acetylgalactosamine 3-beta-galactosyltransferase, 1, [Score=162, Expect=1e-46]} {Dmel: FBgn0032078, C1GalTA, Core 1 Galactosyltransferase A, [Score=138, Expect=8e-38]} {Celegans: WBGene00008019, C38H2.2, Glycoprotein-N-acetylgalactosamine 3-beta-galactosyltransferase 1, [Score=165, Expect=4e-48]} {Smed: dd_Smed_v6_4310_0_1, dd_Smed_v6_4310_0_1, [Score=185, Expect=3e-56]} {RNA1310_125941}
9.	MligTC455_37917	34	0.71	Mlig455_070471	Neo: - Age: -		1.845	-	-	0.950	-	-	0.895	Mlig455_070471 {REF} {Length: 638} {NoTransDecoderORF} {RNA1310_105024}
10.	MligTC455_05913	13	0.28	Mlig455_064325, Mlig455_064355	Neo: - Age: -		1.798	-	-	0.950	0.848	-	-	Mlig455_064325 {REF} {Length: 2163} {Pfam: Amiloride-sensitive sodium channel [PF00858.26, score=137.7]} {RNA1509_19020} {RNA1310_13852} {RNA815_7058} Mlig455_064355 {REF} {Length: 470} {Pfam: Amiloride-sensitive sodium channel [PF00858.26, score=33.1]} {RNA1509_19020} {RNA1310_13852} {RNA815_7058}
11.	MligTC455_27149	162	3.38	Mlig455_010166	Neo: - Age: Down-Up-Down, logFC(26M/2M)=-2.585 Region-enriched R3: 5.671/0.00012 Region-enriched R2: 4.829/0.04858		1.797	-	-	0.952	-	-	0.845	Mlig455_010166 {REF} {Length: 595} {RNA1509_40054} {RNA1310_45578.1} {RNA815_7257.5}
12.	MligTC455_02987	191	3.98	Mlig455_029873, Mlig455_063943	Neo: - Age: -		1.712	-	-	-	0.950	-	0.762	Mlig455_029873 {REF} {Length: 747} {NoTransDecoderORF} {RNA1509_58236} {RNA1310_8943} {RNA815_17300} Mlig455_063943 {REF} {Length: 2144} {RNA1509_58236} {RNA1310_8943} {RNA815_17300}
13.	MligTC455_34332	28	0.59	Mlig455_005058	Neo: - Age: -	NKX3-2	1.688	-	-	0.952	0.736	-	-	Mlig455_005058 {REF} {Length: 1884} {Pfam: Homeodomain [PF00046.31, score=68.8]} {Human: ENSG00000109705, NKX3-2, NK3 homeobox 2, [RH, Score=118, Expect=4e-29]} {Mouse: ENSMUSG00000049691, Nkx3-2, NK3 homeobox 2, [RH, Score=118, Expect=2e-29]} {Dmel: FBgn0004862, bap, bagpipe, [RH, Score=115, Expect=7e-28]} {Celegans: WBGene00003377, mls-2, Mesodermal Lineage Specification, [Score=90.9, Expect=7e-20]} {Smed: dd_Smed_v6_34285_0_1, dd_Smed_v6_34285_0_1, [RH, Score=94.0, Expect=4e-23]}
14.	MligTC455_34333	29	0.59	Mlig455_005256	Neo: - Age: -	NKX3-2	1.688	-	-	0.952	0.736	-	-	Mlig455_005256 {REF} {Length: 1971} {Pfam: Homeodomain [PF00046.31, score=68.8]} {Human: ENSG00000109705, NKX3-2, NK3 homeobox 2, [RH, Score=119, Expect=3e-29]} {Mouse: ENSMUSG00000049691, Nkx3-2, NK3 homeobox 2, [RH, Score=119, Expect=2e-29]} {Dmel: FBgn0004862, bap, bagpipe, [RH, Score=115, Expect=5e-28]} {Celegans: WBGene00003377, mls-2, Mesodermal Lineage Specification, [Score=89.7, Expect=2e-19]} {Smed: dd_Smed_v6_34285_0_1, dd_Smed_v6_34285_0_1, [RH, Score=94.0, Expect=4e-23]}
15.	MligTC455_35643	13	0.28	Mlig455_034753	Neo: - Age: -	NPY4R2	1.679	-	-	0.955	0.724	-	-	Mlig455_034753 {REF} {Length: 2924} {Pfam: 7 transmembrane receptor (rhodopsin family) [PF00001.23, score=87.0]} {Human: ENSG00000264717, NPY4R2, neuropeptide Y receptor Y4-2, [Score=99.0, Expect=3e-22]; ENSG00000204174, NPY4R, neuropeptide Y receptor Y4, [Score=95.9, Expect=4e-21]} {Mouse: ENSMUSG00000048337, Npy4r, neuropeptide Y receptor Y4, [Score=112, Expect=5e-27]} {Dmel: FBgn0037408, NPFR, Neuropeptide F receptor, [Score=128, Expect=2e-32]} {Celegans: WBGene00016110, npr-11, Putative neuropeptide Y receptor 11, [Score=125, Expect=1e-31]} {Smed: dd_Smed_v6_16725_0_1, dd_Smed_v6_16725_0_1, [Score=194, Expect=1e-56]} {RNA1310_122559.1}
16.	MligTC455_22231	40	0.84	Mlig455_032140	Neo: - Age: -		0.967	-	-	0.967	-	-	-	Mlig455_032140 {REF} {Length: 3501} {NoTransDecoderORF} {RNA1509_38388} {RNA1310_14332} {RNA815_16291}
17.	MligTC455_27179	1219	25.39	Mlig455_005503	Neo: - Age: Down-Up-Up, logFC(26M/2M)=-0.871		0.959	-	-	0.959	-	-	-	Mlig455_005503 {REF} {Length: 669} {NoTransDecoderORF} {RNA1509_3} {RNA1310_851.1} {RNA815_80.1}
18.	MligTC455_16750	45	0.93	Mlig455_056697	Neo: - Age: -		0.957	-	-	-	0.957	-	-	Mlig455_056697 {REF} {Length: 1207} {RNA1509_39963} {RNA1310_3400} {RNA815_5315}
19.	MligTC455_32278	31	0.65	Mlig455_041080	Neo: - Age: Up-Down-Down	USH2A	0.955	-	-	0.955	-	-	-	Mlig455_041080 {REF} {Length: 15804} {Pfam: Fibronectin type III domain [PF00041.23, score=464.0]; Laminin EGF domain [PF00053.26, score=197.5]; Purple acid Phosphatase, N-terminal domain [PF16656.7, score=110.9]; Laminin G domain [PF02210.26, score=79.7]; Laminin G domain [PF00054.25, score=43.4]; Fibronectin type III domain [PF16893.7, score=43.3]; Chitinase A, N-terminal domain [PF08329.12, score=22.2]; Concanavalin A-like lectin/glucanases superfamily [PF13385.8, score=20.5]} {Human: ENSG00000042781, USH2A, usherin, [Score=1148, Expect=0.0]} {Mouse: ENSMUSG00000026609, Ush2a, usherin, [Score=1111, Expect=0.0]} {Dmel: FBgn0261563, wb, wing blister, [Score=265, Expect=7e-70]} {Celegans: WBGene00001328, epi-1, Laminin-like protein epi-1, [Score=267, Expect=1e-70]} {Smed: dd_Smed_v6_7924_0_5, dd_Smed_v6_7924_0_5, [Score=229, Expect=2e-59]} {RNA1509_43154} {RNA1310_15599} {RNA815_35868}
20.	MligTC455_14144	39	0.81	Mlig455_019306	Neo: - Age: -		0.954	-	-	0.954	-	-	-	Mlig455_019306 {REF} {Length: 511} {TRANSSPLICED}
21.	MligTC455_14145	21	0.44	Mlig455_019525	Neo: - Age: -		0.954	-	-	0.954	-	-	-	Mlig455_019525 {REF} {Length: 589} {RNA1310_32376.1} {RNA815_45036}
22.	MligTC455_27183	1888	39.34	Mlig455_005388, Mlig455_005412	Neo: - Age: -		0.954	-	-	0.954	-	-	-	Mlig455_005388 {REF} {Length: 49} {TRANSSPLICED} {NoTransDecoderORF} {RNA1509_3} {RNA1310_851.1} {RNA815_4800.2} Mlig455_005412 {REF} {Length: 35} {TRANSSPLICED} {NoTransDecoderORF} {RNA1509_3} {RNA1310_851.1} {RNA815_4800.2}
23.	MligTC455_28135	137	2.85	Mlig455_037259, Mlig455_062385	Neo: - Age: -		0.954	-	-	0.954	-	-	-	Mlig455_037259 {REF} {Length: 337} {NoTransDecoderORF} {RNA1509_26115} {RNA1310_94378} {RNA815_9283.1} Mlig455_062385 {REF} {Length: 930} {NoTransDecoderORF} {RNA1509_25657} {RNA1310_41739} {RNA815_26110}
24.	MligTC455_08017	5	0.11	Mlig455_027000	Neo: - Age: -		0.95	-	-	0.950	-	-	-	Mlig455_027000 {REF} {Length: 1360} {TRANSSPLICED} {RNA1310_47153} {RNA815_22265}
25.	MligTC455_09290	23	0.48	Mlig455_057456	Neo: - Age: -		0.95	-	-	0.950	-	-	-	Mlig455_057456 {REF} {Length: 350} {NoTransDecoderORF} {RNA1310_95940}
26.	MligTC455_13832	178	3.71	Mlig455_065431	Neo: - Age: -		0.95	-	-	0.950	-	-	-	Mlig455_065431 {REF} {Length: 1865} {NoTransDecoderORF} {RNA1509_9010} {RNA1310_38702, RNA1509_9010} {RNA1509_9010, RNA815_4929.1}
27.	MligTC455_24089	12	0.25	Mlig455_018092	Neo: - Age: -		0.95	-	-	0.950	-	-	-	Mlig455_018092 {REF} {Length: 2904} {RNA1509_43825} {RNA1310_93759} {RNA815_63754}