TomoSeq data search

Data search

Results for MligTC455_48374

Cluster

Total UMI counts

Global CPM

Transcripts

Categories

Human homolog

Annotation

MligTC455_48374

286

5.96

Mlig455_054014

Neo: -

Age: Down-Up-Up, logFC(26M/2M)=0.402

Region-enriched R4: 2.391/0.00834
Region-enriched R5: 1.705/0.02774

CCDC25

Mlig455_054014 {REF} {Length: 851} {TRANSSPLICED} {Pfam: NFACT protein RNA binding domain [PF05670.15, score=124.7]; Secretory protein of YscJ/FliF family [PF01514.19, score=21.1]; Caldesmon [PF02029.17, score=18.4]} {Human: ENSG00000147419, CCDC25, coiled-coil domain containing 25, [RH, Score=213, Expect=4e-70]} {Mouse: ENSMUSG00000022035, Ccdc25, coiled-coil domain containing 25, [RH, Score=216, Expect=2e-71]} {Dmel: FBgn0029929, CG4593, [RH, Score=228, Expect=2e-76]} {Celegans: WBGene00013213, Y54G11A.2, [Score=209, Expect=6e-69]} {Smed: dd_Smed_v6_4506_0_1, dd_Smed_v6_4506_0_1, [RH, Score=243, Expect=2e-82]} {RNA1509_7308} {RNA1310_42614, RNA1509_7308} {RNA1509_7308, RNA815_21229}

Cumulative graph for MligTC455_48374

Region-enriched expression

Region	logFC	logCPM	Pvalue	FDR	Specificity
RegionR1	-5.578	3.108	0.18725	0.81953
RegionR2	-0.283	3.108	0.92425	1.00000
RegionR3	0.795	3.108	0.33492	0.87267
RegionR4	2.391	3.108	0.00075	0.00834
RegionR5	1.705	3.108	0.00371	0.02774
RegionR6	0.389	3.108	0.65565	1.00000
RegionR7	0.014	3.108	0.85131	1.00000
RegionR8	0.568	3.108	0.61647	1.00000

Regeneration-enriched expression

Region	logFC	logCPM	PValue	FDR	Specificity
RegenerationR1	-0.413	3.108	1.00000	1.00000
RegenerationR2	-0.351	3.108	0.41112	0.82112
RegenerationR3	-0.328	3.108	0.46453	0.84074
RegenerationR4	-0.489	3.108	0.28561	0.73050
RegenerationR5	-0.295	3.108	0.43494	0.82129
RegenerationR6	0.006	3.108	0.99100	1.00000
RegenerationBL	1.08	3.108	0.06034	0.28549
RegenerationTP	-0.165	3.108	0.83148	1.00000

Genes with expression patterns similar to MligTC455_48374

Nr.	Cluster	Total UMI counts	Global CPM	Transcripts	Categories	Human homolog	Σ Spearman correlations	Int1	Int2	Int3	Reg1	Reg2	Reg3	Annotation
1.	MligTC455_48374	286	5.96	Mlig455_054014	Neo: - Age: Down-Up-Up, logFC(26M/2M)=0.402 Region-enriched R4: 2.391/0.00834 Region-enriched R5: 1.705/0.02774	CCDC25	6	1.000	1.000	1.000	1.000	1.000	1.000	Mlig455_054014 {REF} {Length: 851} {TRANSSPLICED} {Pfam: NFACT protein RNA binding domain [PF05670.15, score=124.7]; Secretory protein of YscJ/FliF family [PF01514.19, score=21.1]; Caldesmon [PF02029.17, score=18.4]} {Human: ENSG00000147419, CCDC25, coiled-coil domain containing 25, [RH, Score=213, Expect=4e-70]} {Mouse: ENSMUSG00000022035, Ccdc25, coiled-coil domain containing 25, [RH, Score=216, Expect=2e-71]} {Dmel: FBgn0029929, CG4593, [RH, Score=228, Expect=2e-76]} {Celegans: WBGene00013213, Y54G11A.2, [Score=209, Expect=6e-69]} {Smed: dd_Smed_v6_4506_0_1, dd_Smed_v6_4506_0_1, [RH, Score=243, Expect=2e-82]} {RNA1509_7308} {RNA1310_42614, RNA1509_7308} {RNA1509_7308, RNA815_21229}
2.	MligTC455_46500	1415	29.48	Mlig455_067708	Neo: - Age: Down-Up-Up	TXNL4A	1.745	-	-	-	0.795	-	0.950	Mlig455_067708 {REF} {Length: 606} {TRANSSPLICED} {Pfam: Mitosis protein DIM1 [PF02966.18, score=56.7]} {Human: ENSG00000141759, TXNL4A, thioredoxin like 4A, [Score=90.5, Expect=1e-24]} {Mouse: ENSMUSG00000057130, Txnl4a, thioredoxin-like 4A, [Score=90.5, Expect=2e-24]} {Dmel: FBgn0031601, Dim1, [Score=89.7, Expect=3e-24]} {Celegans: WBGene00235102, Y54G2A.75, [Score=91.3, Expect=6e-25]} {Smed: dd_Smed_v6_5223_0_1, dd_Smed_v6_5223_0_1, [Score=98.2, Expect=1e-27]} {RNA1509_28744} {RNA1310_59342} {RNA815_30323}
3.	MligTC455_44538	162	3.37	Mlig455_042460	Neo: - Age: Down-Up-Down Region-enriched R5: 2.820/0.00714	PRDM10	1.736	-	-	-	-	0.959	0.777	Mlig455_042460 {REF} {Length: 3805} {TRANSSPLICED} {Pfam: Zinc finger, C2H2 type [PF00096.28, score=53.8]; C2H2-type zinc finger [PF13894.8, score=53.2]; C2H2 type zinc-finger (2 copies) [PF12756.9, score=24.5]; Zinc-finger of C2H2 type [PF12874.9, score=21.5]} {Human: ENSG00000170325, PRDM10, PR/SET domain 10, [RH, Score=151, Expect=8e-37]} {Mouse: ENSMUSG00000042496, Prdm10, PR domain containing 10, [RH, Score=150, Expect=2e-36]} {Dmel: FBgn0030314, CG11696, [Score=55.8, Expect=2e-07]} {RNA1509_23473} {RNA1310_4659} {RNA815_26860}
4.	MligTC455_20058	373	7.78	Mlig455_051135	Neo: - Age: Up-Down-Up	AMT	0.966	-	-	-	-	-	0.966	Mlig455_051135 {REF} {Length: 1664} {TRANSSPLICED} {Pfam: Aminomethyltransferase folate-binding domain [PF01571.23, score=260.5]; Glycine cleavage T-protein C-terminal barrel domain [PF08669.13, score=63.7]} {Human: ENSG00000145020, AMT, aminomethyltransferase, [RH, Score=338, Expect=4e-113]} {Mouse: ENSMUSG00000032607, Amt, aminomethyltransferase, [RH, Score=343, Expect=3e-115]} {Dmel: FBgn0032287, CG6415, [RH, Score=310, Expect=2e-102]} {Celegans: WBGene00017765, gcst-1, Aminomethyltransferase, [RH, Score=300, Expect=1e-98]} {Smed: dd_Smed_v6_3994_0_1, dd_Smed_v6_3994_0_1, [RH, Score=346, Expect=8e-117]} {RNA1509_4904, RNA1509_54318} {RNA1310_4930.1, RNA1509_54318} {RNA1509_54318, RNA815_1503.1}
5.	MligTC455_43674	726	15.13	Mlig455_059232	Neo: - Age: Up-Down-Down	ABHD6	0.95	-	-	-	-	0.950	-	Mlig455_059232 {REF} {Length: 2884} {TRANSSPLICED} {Pfam: Alpha/beta hydrolase family [PF12697.9, score=63.6]; Serine aminopeptidase, S33 [PF12146.10, score=51.4]; alpha/beta hydrolase fold [PF00561.22, score=47.2]; Thioesterase domain [PF00975.22, score=21.3]; Palmitoyl protein thioesterase [PF02089.17, score=18.7]} {Human: ENSG00000163686, ABHD6, abhydrolase domain containing 6, [RH, Score=144, Expect=3e-39]} {Mouse: ENSMUSG00000025277, Abhd6, abhydrolase domain containing 6, [RH, Score=135, Expect=3e-36]} {RNA1509_24936, RNA1509_32918, RNA1509_50343} {RNA1310_20027.1, RNA1509_24936, RNA1509_32918, RNA1509_50343} {RNA1509_24936, RNA1509_32918, RNA1509_50343, RNA815_17908.1}

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