TomoSeq data search

Data search

Results for MligTC455_48487

Cluster

Total UMI counts

Global CPM

Transcripts

Categories

Human homolog

Annotation

MligTC455_48487

433

9.02

Mlig455_019752

Neo: -

Age: -

Region-enriched R7: 2.416/0.04729

TBC1D12

Mlig455_019752 {REF} {Length: 3840} {TRANSSPLICED} {Pfam: Rab-GTPase-TBC domain [PF00566.20, score=150.6]} {Human: ENSG00000108239, TBC1D12, TBC1 domain family member 12, [RH, Score=311, Expect=9e-96]; ENSG00000132405, TBC1D14, TBC1 domain family member 14, [RH, Score=310, Expect=4e-96]} {Mouse: ENSMUSG00000048720, Tbc1d12, TBC1D12: TBC1 domain family, member 12, [RH, Score=309, Expect=6e-96]; ENSMUSG00000029192, Tbc1d14, TBC1 domain family, member 14, [RH, Score=306, Expect=1e-94]} {Dmel: FBgn0035879, GAPcenA, GTPase activating protein and centrosome-associated, [Score=99.0, Expect=4e-21]} {Celegans: WBGene00044061, tbc-12, TBC (Tre-2/Bub2/Cdc16) domain family, [RH, Score=267, Expect=6e-81]} {Smed: dd_Smed_v6_7827_0_1, dd_Smed_v6_7827_0_1, [RH, Score=261, Expect=1e-78]} {RNA1509_49497} {RNA1310_16549} {RNA815_3936.1}

Cumulative graph for MligTC455_48487

Region-enriched expression

Region	logFC	logCPM	Pvalue	FDR	Specificity
RegionR1	-8.636	3.601	0.00472	0.21810
RegionR2	2.089	3.601	0.02417	0.17299
RegionR3	1.128	3.601	0.20564	0.74579
RegionR4	-0.601	3.601	0.96474	1.00000
RegionR5	0.997	3.601	0.24255	0.55497
RegionR6	0.966	3.601	0.28952	0.88140
RegionR7	2.416	3.601	0.00154	0.04729
RegionR8	1.642	3.601	0.13477	0.67166

Regeneration-enriched expression

Region	logFC	logCPM	PValue	FDR	Specificity
RegenerationR1	1.278	3.601	0.99988	1.00000
RegenerationR2	-0.518	3.601	0.40869	0.81926
RegenerationR3	-0.586	3.601	0.39652	0.80075
RegenerationR4	-0.064	3.601	0.91784	1.00000
RegenerationR5	0.217	3.601	0.72296	0.96057
RegenerationR6	-0.28	3.601	0.68383	0.91637
RegenerationBL	-0.581	3.601	0.46245	0.82912
RegenerationTP	-0.339	3.601	0.66256	0.99513

Genes with expression patterns similar to MligTC455_48487

Nr.	Cluster	Total UMI counts	Global CPM	Transcripts	Categories	Human homolog	Σ Spearman correlations	Int1	Int2	Int3	Reg1	Reg2	Reg3	Annotation
1.	MligTC455_48487	433	9.02	Mlig455_019752	Neo: - Age: - Region-enriched R7: 2.416/0.04729	TBC1D12	6	1.000	1.000	1.000	1.000	1.000	1.000	Mlig455_019752 {REF} {Length: 3840} {TRANSSPLICED} {Pfam: Rab-GTPase-TBC domain [PF00566.20, score=150.6]} {Human: ENSG00000108239, TBC1D12, TBC1 domain family member 12, [RH, Score=311, Expect=9e-96]; ENSG00000132405, TBC1D14, TBC1 domain family member 14, [RH, Score=310, Expect=4e-96]} {Mouse: ENSMUSG00000048720, Tbc1d12, TBC1D12: TBC1 domain family, member 12, [RH, Score=309, Expect=6e-96]; ENSMUSG00000029192, Tbc1d14, TBC1 domain family, member 14, [RH, Score=306, Expect=1e-94]} {Dmel: FBgn0035879, GAPcenA, GTPase activating protein and centrosome-associated, [Score=99.0, Expect=4e-21]} {Celegans: WBGene00044061, tbc-12, TBC (Tre-2/Bub2/Cdc16) domain family, [RH, Score=267, Expect=6e-81]} {Smed: dd_Smed_v6_7827_0_1, dd_Smed_v6_7827_0_1, [RH, Score=261, Expect=1e-78]} {RNA1509_49497} {RNA1310_16549} {RNA815_3936.1}
2.	MligTC455_44791	570	11.87	Mlig455_040025	Neo: - Age: - Region-enriched R5: 2.098/0.00188		2.549	0.952	-	-	-	0.789	0.808	Mlig455_040025 {REF} {Length: 1132} {TRANSSPLICED} {RNA1509_59812} {RNA1310_53092.2, RNA1509_59812} {RNA1509_59812, RNA815_55470}
3.	MligTC455_46153	1093	22.78	Mlig455_033128	Neo: - Age: -	PPP2R5A	2.506	0.957	-	0.800	-	-	0.749	Mlig455_033128 {REF} {Length: 2343} {TRANSSPLICED} {Pfam: Protein phosphatase 2A regulatory B subunit (B56 family) [PF01603.22, score=583.2]} {Human: ENSG00000066027, PPP2R5A, protein phosphatase 2 regulatory subunit B'alpha, [RH, Score=674, Expect=0.0]; ENSG00000154001, PPP2R5E, protein phosphatase 2 regulatory subunit B'epsilon, [RH, Score=669, Expect=0.0]} {Mouse: ENSMUSG00000026626, Ppp2r5a, protein phosphatase 2, regulatory subunit B', alpha, [RH, Score=683, Expect=0.0]; ENSMUSG00000021051, Ppp2r5e, protein phosphatase 2, regulatory subunit B', epsilon, [RH, Score=668, Expect=0.0]} {Dmel: FBgn0027492, wdb, widerborst, [RH, Score=666, Expect=0.0]} {Celegans: WBGene00012348, pptr-1, Serine/threonine-protein phosphatase 2A regulatory subunit pptr-1, [RH, Score=647, Expect=0.0]} {Smed: dd_Smed_v6_2613_0_4, dd_Smed_v6_2613_0_4, [RH, Score=718, Expect=0.0]} {RNA1509_14734, RNA1509_39615, RNA1509_52313, RNA1509_55474} {RNA1310_9707.1, RNA1509_39615, RNA1509_52313, RNA1509_55474} {RNA1509_39615, RNA1509_52313, RNA1509_55474, RNA815_3247.1}
4.	MligTC455_04063	117	2.44	Mlig455_008220	Neo: Int S/G2/M Age: - Region-enriched R5: 2.135/0.01680	TOMM40	1.76	-	-	-	0.953	-	0.807	Mlig455_008220 {REF} {Length: 2690} {TRANSSPLICED} {Pfam: Eukaryotic porin [PF01459.24, score=167.0]} {Human: ENSG00000130204, TOMM40, translocase of outer mitochondrial membrane 40, [RH, Score=181, Expect=2e-53]} {Mouse: ENSMUSG00000002984, Tomm40, translocase of outer mitochondrial membrane 40, [RH, Score=178, Expect=3e-52]} {Dmel: FBgn0016041, Tom40, Translocase of outer membrane 40, [RH, Score=229, Expect=3e-72]} {Celegans: WBGene00007686, tomm-40, Mitochondrial import receptor subunit TOM40 homolog, [RH, Score=194, Expect=1e-59]} {Smed: dd_Smed_v6_4005_0_1, dd_Smed_v6_4005_0_1, [RH, Score=200, Expect=2e-61]} {RNA1509_20037, RNA1509_50837} {RNA1310_22195, RNA1509_20037, RNA1509_50837} {RNA1509_20037, RNA1509_50837, RNA815_8897}
5.	MligTC455_29117	24	0.51	Mlig455_057180	Neo: - Age: logFC(26M/2M)=2.473		1.735	-	-	-	0.959	-	0.776	Mlig455_057180 {REF} {Length: 3369} {Pfam: CUB domain [PF00431.22, score=88.0]; Domain of unknown function (DUF4744) [PF15918.7, score=65.2]} {Mouse: ENSMUSG00000026726, Cubn, cubilin (intrinsic factor-cobalamin receptor), [Score=56.6, Expect=2e-07]} {RNA1509_33410} {RNA1310_33183} {RNA815_39690}
6.	MligTC455_15267	527	10.97	Mlig455_038934	Neo: - Age: -		1.668	0.960	-	-	-	0.708	-	Mlig455_038934 {REF} {Length: 4442} {TRANSSPLICED} {Pfam: ALMS motif [PF15309.8, score=45.3]} {Smed: dd_Smed_v6_5064_0_1, dd_Smed_v6_5064_0_1, [Score=85.9, Expect=6e-17]} {RNA1509_20372, RNA1509_29169, RNA1509_51896, RNA1509_52383} {RNA1310_3943.1, RNA1509_20372, RNA1509_29169, RNA1509_51896, RNA1509_52383} {RNA1509_20372, RNA1509_29169, RNA1509_51896, RNA1509_52383, RNA815_11083}
7.	MligTC455_42144	377	7.86	Mlig455_022869	Neo: Irradiation Age: - Region-enriched R5: 1.739/0.04174	BRIP1	1.653	-	-	-	0.703	-	0.950	Mlig455_022869 {REF} {Length: 3883} {TRANSSPLICED} {Pfam: Helicase C-terminal domain [PF13307.8, score=179.3]; DEAD_2 [PF06733.17, score=167.3]; DEAD/DEAH box helicase [PF00270.31, score=18.7]} {Human: ENSG00000136492, BRIP1, BRCA1 interacting protein C-terminal helicase 1, [RH, Score=608, Expect=0.0]} {Mouse: ENSMUSG00000034329, Brip1, BRCA1 interacting protein C-terminal helicase 1, [RH, Score=656, Expect=0.0]} {Dmel: FBgn0029798, CG4078, [Score=217, Expect=9e-58]} {Celegans: WBGene00009124, rtel-1, Regulator of telomere elongation helicase 1 homolog, [RH, Score=267, Expect=2e-74]} {Smed: dd_Smed_v6_16638_0_2, dd_Smed_v6_16638_0_2, [RH, Score=435, Expect=2e-138]} {RNA1509_12020} {RNA1310_2305.2, RNA1509_12020} {RNA1509_12020, RNA815_995}
8.	MligTC455_17931	47	0.98	Mlig455_031978	Neo: - Age: -		0.989	-	-	-	0.989	-	-	Mlig455_031978 {REF} {Length: 3543} {RNA1509_20101} {RNA1310_42491} {RNA815_54382}
9.	MligTC455_15781	95	1.98	Mlig455_010961	Neo: - Age: Up-Down-Up, logFC(26M/2M)=0.411 Region-enriched R3: 4.373/0.00422		0.983	-	-	-	0.983	-	-	Mlig455_010961 {REF} {Length: 2852} {TRANSSPLICED} {Pfam: X-Pro dipeptidyl-peptidase (S15 family) [PF02129.20, score=160.9]; Serine aminopeptidase, S33 [PF12146.10, score=27.9]; X-Pro dipeptidyl-peptidase C-terminal non-catalytic domain [PF08530.12, score=23.6]; alpha/beta hydrolase fold [PF00561.22, score=22.2]} {RNA1509_39835} {RNA1310_1122.1, RNA1509_39835} {RNA1509_39835, RNA815_24300}
10.	MligTC455_13805	182	3.8	Mlig455_038423	Neo: - Age: - Region-enriched R4: 3.172/0.00688		0.982	-	-	-	0.982	-	-	Mlig455_038423 {REF} {Length: 4946} {RNA1509_41798} {RNA1310_24413} {RNA815_8731.1}
11.	MligTC455_48945	346	7.21	Mlig455_059313	Neo: - Age: Down-Down-Up, logFC(26M/2M)=-0.649		0.982	-	-	-	0.982	-	-	Mlig455_059313 {REF} {Length: 1224} {TRANSSPLICED} {Pfam: Dihydrofolate reductase [PF00186.21, score=98.7]} {Smed: dd_Smed_v6_7808_0_1, dd_Smed_v6_7808_0_1, [RH, Score=107, Expect=2e-29]} {RNA1509_40431} {RNA1310_21528} {RNA815_25460}
12.	MligTC455_48812	343	7.14	Mlig455_023773	Neo: - Age: -	SYT3	0.971	0.971	-	-	-	-	-	Mlig455_023773 {REF} {Length: 4372} {Pfam: C2 domain [PF00168.32, score=98.7]} {Human: ENSG00000213023, SYT3, synaptotagmin 3, [Score=112, Expect=5e-25]} {Mouse: ENSMUSG00000030731, Syt3, synaptotagmin III, [Score=109, Expect=2e-24]} {Dmel: FBgn0261089, Sytalpha, Synaptotagmin alpha, [Score=152, Expect=7e-39]} {Celegans: WBGene00004926, snt-6, SyNapTotagmin, [Score=90.9, Expect=3e-19]} {Smed: dd_Smed_v6_12977_0_1, dd_Smed_v6_12977_0_1, [Score=68.6, Expect=9e-12]} {RNA1509_18500} {RNA1310_24981} {RNA815_6817}
13.	MligTC455_50670	1021	21.27	Mlig455_026568	Neo: Int S/G2/M Age: - Region-enriched R5: 1.125/0.03562	SF3A2	0.968	-	-	-	-	-	0.968	Mlig455_026568 {REF} {Length: 1208} {TRANSSPLICED} {Pfam: Pre-mRNA-splicing factor SF3a complex subunit 2 (Prp11) [PF16835.7, score=127.4]; Zinc-finger of C2H2 type [PF12874.9, score=30.7]; Cactus-binding C-terminus of cactin protein [PF09732.11, score=19.2]} {Human: ENSG00000104897, SF3A2, splicing factor 3a subunit 2, [RH, Score=355, Expect=1e-120]} {Mouse: ENSMUSG00000020211, Sf3a2, splicing factor 3a, subunit 2, [Score=355, Expect=3e-120]} {Dmel: FBgn0036314, Sf3a2, Splicing factor 3a subunit 2, [RH, Score=377, Expect=1e-132]} {Celegans: WBGene00008683, repo-1, REversed POlarity in early embryos, [RH, Score=361, Expect=5e-127]} {Smed: dd_Smed_v6_1788_0_1, dd_Smed_v6_1788_0_1, [RH, Score=372, Expect=5e-130]} {RNA1509_34887, RNA1509_9978} {RNA1310_38332.1, RNA1509_34887} {RNA1509_34887, RNA815_9802}
14.	MligTC455_19190	478	9.96	Mlig455_026448	Neo: - Age: -	DGCR6L	0.958	-	-	-	-	-	0.958	Mlig455_026448 {REF} {Length: 2035} {TRANSSPLICED} {Pfam: DiGeorge syndrome critical region 6 (DGCR6) protein [PF07324.13, score=181.5]; Protein of unknown function (DUF2458) [PF10454.11, score=22.6]} {Human: ENSG00000128185, DGCR6L, DiGeorge syndrome critical region gene 6 like, [RH, Score=100, Expect=1e-25]; ENSG00000278817, AC007325.4, protein DGCR6, [RH, Score=98.6, Expect=5e-25]; ENSG00000183628, DGCR6, DiGeorge syndrome critical region gene 6, [RH, Score=98.6, Expect=5e-25]} {Mouse: ENSMUSG00000111647, Dgcr6, DiGeorge syndrome critical region gene 6, [RH, Score=99.8, Expect=8e-26]; ENSMUSG00000003531, Dgcr6, DiGeorge syndrome critical region gene 6, [RH, Score=99.8, Expect=8e-26]} {Dmel: FBgn0001099, gdl, gonadal, [RH, Score=122, Expect=5e-35]} {Smed: dd_Smed_v6_6214_0_1, dd_Smed_v6_6214_0_1, [RH, Score=112, Expect=4e-31]} {RNA1509_18355} {RNA1310_28938} {RNA815_13630}
15.	MligTC455_40187	270	5.62	Mlig455_049370	Neo: Irradiation Age: Down-Up-Down, logFC(26M/2M)=0.494		0.954	-	-	-	-	-	0.954	Mlig455_049370 {REF} {Length: 5146} {TRANSSPLICED} {RNA1509_31164, RNA1509_58180} {RNA1310_1836, RNA1509_58180} {RNA1509_58180, RNA815_1211}
16.	MligTC455_51822	298	6.2	Mlig455_034919	Neo: - Age: -		0.954	-	-	-	-	-	0.954	Mlig455_034919 {REF} {Length: 3209} {TRANSSPLICED} {Pfam: Acetyltransferase (GNAT) domain [PF13673.9, score=32.2]; Acetyltransferase (GNAT) family [PF00583.27, score=28.1]; Acetyltransferase (GNAT) domain [PF13508.9, score=23.6]} {Smed: dd_Smed_v6_13214_0_1, dd_Smed_v6_13214_0_1, [RH, Score=142, Expect=6e-36]} {RNA1509_32287, RNA1509_43890} {RNA1310_8299.1, RNA1509_32287, RNA1509_43890} {RNA1509_32287, RNA1509_43890, RNA815_17527}
17.	MligTC455_21288	421	8.76	Mlig455_054900	Neo: - Age: -	CCNY	0.95	-	-	-	-	-	0.950	Mlig455_054900 {REF} {Length: 3728} {TRANSSPLICED} {Pfam: Cyclin, N-terminal domain [PF00134.25, score=37.2]; Cyclin [PF08613.13, score=29.5]} {Human: ENSG00000108100, CCNY, cyclin Y, [RH, Score=268, Expect=2e-86]; ENSG00000163249, CCNYL1, cyclin Y like 1, [RH, Score=260, Expect=7e-83]} {Mouse: ENSMUSG00000024286, Ccny, cyclin Y, [RH, Score=271, Expect=1e-87]; ENSMUSG00000070871, Ccnyl1, cyclin Y-like 1, [RH, Score=261, Expect=2e-83]} {Dmel: FBgn0032378, CycY, Cyclin Y, [RH, Score=261, Expect=4e-83]} {Celegans: WBGene00022697, cyy-1, Cyclin-Y, [RH, Score=275, Expect=3e-89]} {Smed: dd_Smed_v6_8226_0_1, dd_Smed_v6_8226_0_1, [Score=245, Expect=6e-77]} {RNA1509_8018} {RNA1310_8716, RNA1509_8018} {RNA1509_8018, RNA815_15699}
18.	MligTC455_52614	47	0.97	Mlig455_008237	Neo: Neoblast, stringent Age: - Region-enriched R5: 3.729/0.01271		0.95	-	-	-	0.950	-	-	Mlig455_008237 {REF} {Length: 1728} {RNA1310_19519} {RNA815_58446}

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