Data search
Results for MligTC455_48574
| Cluster | Total UMI counts | Global CPM | Transcripts | Categories | Human homolog | Annotation |
|---|---|---|---|---|---|---|
| MligTC455_48574 | 911 | 18.97 | Mlig455_017568, Mlig455_026866, Mlig455_030829, Mlig455_047788 | Neo: - Age: Down-Up-Down |
IBA57 | Mlig455_017568 {REF} {Length: 1945} {TRANSSPLICED} {Pfam: Aminomethyltransferase folate-binding domain [PF01571.23, score=29.0]} {Human: ENSG00000181873, IBA57, IBA57, iron-sulfur cluster assembly, [RH, Score=188, Expect=3e-56]} {Mouse: ENSMUSG00000049287, Iba57, IBA57 homolog, iron-sulfur cluster assembly, [RH, Score=182, Expect=5e-54]} {Dmel: FBgn0037610, CG8043, [RH, Score=170, Expect=7e-50]} {Celegans: WBGene00009563, F39H2.3, [RH, Score=124, Expect=3e-33]} {Smed: dd_Smed_v6_7232_0_1, dd_Smed_v6_7232_0_1, [RH, Score=185, Expect=9e-56]} {RNA1509_13687} {RNA1310_14437} {RNA815_5296} Mlig455_026866 {REF} {Length: 1945} {TRANSSPLICED} {Pfam: Aminomethyltransferase folate-binding domain [PF01571.23, score=29.0]} {Human: ENSG00000181873, IBA57, IBA57, iron-sulfur cluster assembly, [RH, Score=188, Expect=3e-56]} {Mouse: ENSMUSG00000049287, Iba57, IBA57 homolog, iron-sulfur cluster assembly, [RH, Score=182, Expect=5e-54]} {Dmel: FBgn0037610, CG8043, [RH, Score=170, Expect=7e-50]} {Celegans: WBGene00009563, F39H2.3, [RH, Score=124, Expect=3e-33]} {Smed: dd_Smed_v6_7232_0_1, dd_Smed_v6_7232_0_1, [RH, Score=185, Expect=9e-56]} {RNA1509_13687} {RNA1310_14437} {RNA815_5296} Mlig455_030829 {REF} {Length: 1915} {TRANSSPLICED} {Pfam: Aminomethyltransferase folate-binding domain [PF01571.23, score=28.9]} {Human: ENSG00000181873, IBA57, IBA57, iron-sulfur cluster assembly, [RH, Score=188, Expect=3e-56]} {Mouse: ENSMUSG00000049287, Iba57, IBA57 homolog, iron-sulfur cluster assembly, [RH, Score=182, Expect=4e-54]} {Dmel: FBgn0037610, CG8043, [RH, Score=169, Expect=2e-49]} {Celegans: WBGene00009563, F39H2.3, [RH, Score=122, Expect=2e-32]} {Smed: dd_Smed_v6_7232_0_1, dd_Smed_v6_7232_0_1, [RH, Score=183, Expect=5e-55]} {RNA1509_13687} {RNA1310_14437} {RNA815_5296} Mlig455_047788 {REF} {Length: 1945} {TRANSSPLICED} {Pfam: Aminomethyltransferase folate-binding domain [PF01571.23, score=29.0]} {Human: ENSG00000181873, IBA57, IBA57, iron-sulfur cluster assembly, [RH, Score=188, Expect=3e-56]} {Mouse: ENSMUSG00000049287, Iba57, IBA57 homolog, iron-sulfur cluster assembly, [RH, Score=182, Expect=5e-54]} {Dmel: FBgn0037610, CG8043, [RH, Score=170, Expect=7e-50]} {Celegans: WBGene00009563, F39H2.3, [RH, Score=124, Expect=3e-33]} {Smed: dd_Smed_v6_7232_0_1, dd_Smed_v6_7232_0_1, [RH, Score=185, Expect=9e-56]} {RNA1509_13687} {RNA1310_14437, RNA1509_13687} {RNA1509_13687, RNA815_5296} |
Cumulative graph for MligTC455_48574
Region-enriched expression
| Region | logFC | logCPM | Pvalue | FDR | Specificity |
|---|---|---|---|---|---|
| RegionR1 | -1.031 | 4.598 | 0.32071 | 0.96985 | |
| RegionR2 | 0.69 | 4.598 | 0.21179 | 0.57620 | |
| RegionR3 | -0.208 | 4.598 | 0.64316 | 1.00000 | |
| RegionR4 | -0.276 | 4.598 | 0.58399 | 0.89987 | |
| RegionR5 | 0.669 | 4.598 | 0.06968 | 0.23751 | |
| RegionR6 | -0.492 | 4.598 | 0.24624 | 0.83183 | |
| RegionR7 | 0.211 | 4.598 | 0.66137 | 1.00000 | |
| RegionR8 | 0.437 | 4.598 | 0.43880 | 1.00000 |
Regeneration-enriched expression
| Region | logFC | logCPM | PValue | FDR | Specificity |
|---|---|---|---|---|---|
| RegenerationR1 | -5.203 | 4.598 | 0.31402 | 1.00000 | |
| RegenerationR2 | 0.008 | 4.598 | 0.98822 | 1.00000 | |
| RegenerationR3 | 1.075 | 4.598 | 0.05439 | 0.40079 | |
| RegenerationR4 | 0.556 | 4.598 | 0.29622 | 0.73884 | |
| RegenerationR5 | 0.346 | 4.598 | 0.47543 | 0.84446 | |
| RegenerationR6 | 0.904 | 4.598 | 0.10383 | 0.39920 | |
| RegenerationBL | 1.522 | 4.598 | 0.00391 | 0.05577 | |
| RegenerationTP | -0.505 | 4.598 | 0.44487 | 0.86418 |
Genes with expression patterns similar to MligTC455_48574
| Nr. | Cluster | Total UMI counts | Global CPM | Transcripts | Categories | Human homolog | Σ Spearman correlations | Int1 | Int2 | Int3 | Reg1 | Reg2 | Reg3 | Annotation |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1. | MligTC455_48574 | 911 | 18.97 | Mlig455_017568, Mlig455_026866, Mlig455_030829, Mlig455_047788 | Neo: - Age: Down-Up-Down |
IBA57 | 6 | 1.000 | 1.000 | 1.000 | 1.000 | 1.000 | 1.000 | Mlig455_017568 {REF} {Length: 1945} {TRANSSPLICED} {Pfam: Aminomethyltransferase folate-binding domain [PF01571.23, score=29.0]} {Human: ENSG00000181873, IBA57, IBA57, iron-sulfur cluster assembly, [RH, Score=188, Expect=3e-56]} {Mouse: ENSMUSG00000049287, Iba57, IBA57 homolog, iron-sulfur cluster assembly, [RH, Score=182, Expect=5e-54]} {Dmel: FBgn0037610, CG8043, [RH, Score=170, Expect=7e-50]} {Celegans: WBGene00009563, F39H2.3, [RH, Score=124, Expect=3e-33]} {Smed: dd_Smed_v6_7232_0_1, dd_Smed_v6_7232_0_1, [RH, Score=185, Expect=9e-56]} {RNA1509_13687} {RNA1310_14437} {RNA815_5296} Mlig455_026866 {REF} {Length: 1945} {TRANSSPLICED} {Pfam: Aminomethyltransferase folate-binding domain [PF01571.23, score=29.0]} {Human: ENSG00000181873, IBA57, IBA57, iron-sulfur cluster assembly, [RH, Score=188, Expect=3e-56]} {Mouse: ENSMUSG00000049287, Iba57, IBA57 homolog, iron-sulfur cluster assembly, [RH, Score=182, Expect=5e-54]} {Dmel: FBgn0037610, CG8043, [RH, Score=170, Expect=7e-50]} {Celegans: WBGene00009563, F39H2.3, [RH, Score=124, Expect=3e-33]} {Smed: dd_Smed_v6_7232_0_1, dd_Smed_v6_7232_0_1, [RH, Score=185, Expect=9e-56]} {RNA1509_13687} {RNA1310_14437} {RNA815_5296} Mlig455_030829 {REF} {Length: 1915} {TRANSSPLICED} {Pfam: Aminomethyltransferase folate-binding domain [PF01571.23, score=28.9]} {Human: ENSG00000181873, IBA57, IBA57, iron-sulfur cluster assembly, [RH, Score=188, Expect=3e-56]} {Mouse: ENSMUSG00000049287, Iba57, IBA57 homolog, iron-sulfur cluster assembly, [RH, Score=182, Expect=4e-54]} {Dmel: FBgn0037610, CG8043, [RH, Score=169, Expect=2e-49]} {Celegans: WBGene00009563, F39H2.3, [RH, Score=122, Expect=2e-32]} {Smed: dd_Smed_v6_7232_0_1, dd_Smed_v6_7232_0_1, [RH, Score=183, Expect=5e-55]} {RNA1509_13687} {RNA1310_14437} {RNA815_5296} Mlig455_047788 {REF} {Length: 1945} {TRANSSPLICED} {Pfam: Aminomethyltransferase folate-binding domain [PF01571.23, score=29.0]} {Human: ENSG00000181873, IBA57, IBA57, iron-sulfur cluster assembly, [RH, Score=188, Expect=3e-56]} {Mouse: ENSMUSG00000049287, Iba57, IBA57 homolog, iron-sulfur cluster assembly, [RH, Score=182, Expect=5e-54]} {Dmel: FBgn0037610, CG8043, [RH, Score=170, Expect=7e-50]} {Celegans: WBGene00009563, F39H2.3, [RH, Score=124, Expect=3e-33]} {Smed: dd_Smed_v6_7232_0_1, dd_Smed_v6_7232_0_1, [RH, Score=185, Expect=9e-56]} {RNA1509_13687} {RNA1310_14437, RNA1509_13687} {RNA1509_13687, RNA815_5296} |
| 2. | MligTC455_50877 | 133 | 2.76 | Mlig455_023008 | Neo: - Age: - Regeneration-upregulated BL: 5.778 Regeneration-enriched BL: 5.778 |
1.765 | - | - | 0.811 | - | - | 0.954 | Mlig455_023008 {REF} {Length: 819} {TRANSSPLICED} {RNA1310_74407} {RNA815_32847.1} | |
| 3. | MligTC455_12238 | 249 | 5.18 | Mlig455_015512 | Neo: Irradiation Age: logFC(26M/2M)=-0.488 Regeneration-upregulated R5: 2.536 Regeneration-enriched R5: 2.536 |
PDP2 | 1.737 | - | - | - | 0.963 | - | 0.774 | Mlig455_015512 {REF} {Length: 2946} {Pfam: Protein phosphatase 2C [PF00481.23, score=58.2]} {Human: ENSG00000172840, PDP2, pyruvate dehyrogenase phosphatase catalytic subunit 2, [Score=99.4, Expect=2e-21]; ENSG00000164951, PDP1, pyruvate dehyrogenase phosphatase catalytic subunit 1, [Score=96.7, Expect=1e-20]} {Mouse: ENSMUSG00000049225, Pdp1, pyruvate dehyrogenase phosphatase catalytic subunit 1, [Score=97.1, Expect=8e-21]} {Dmel: FBgn0029958, Pdp, Pyruvate dehydrogenase phosphatase, [Score=108, Expect=6e-25]} {Celegans: WBGene00022832, pdp-1, Pyruvate Dehydrogenase Phosphatase homolog, [Score=94.0, Expect=2e-20]} {Smed: dd_Smed_v6_4201_0_1, dd_Smed_v6_4201_0_1, [Score=119, Expect=4e-30]} {RNA1509_39535, RNA1509_40467, RNA1509_48674} {RNA1310_14443, RNA1509_39535, RNA1509_40467, RNA1509_48674} {RNA1509_39535, RNA1509_40467, RNA1509_48674, RNA815_18993} |
| 4. | MligTC455_40163 | 637 | 13.28 | Mlig455_020207 | Neo: - Age: - |
MRPL49 | 0.982 | - | - | - | - | - | 0.982 | Mlig455_020207 {REF} {Length: 1458} {TRANSSPLICED} {Pfam: Mitochondrial large subunit ribosomal protein (Img2) [PF05046.16, score=70.2]} {Human: ENSG00000149792, MRPL49, mitochondrial ribosomal protein L49, [RH, Score=87.0, Expect=4e-21]} {Mouse: ENSMUSG00000007338, Mrpl49, mitochondrial ribosomal protein L49, [RH, Score=96.3, Expect=1e-24]} {Dmel: FBgn0030433, mRpL49, mitochondrial ribosomal protein L49, [RH, Score=82.4, Expect=2e-19]} {Celegans: WBGene00011247, mrpl-49, Probable 39S ribosomal protein L49, mitochondrial, [RH, Score=72.8, Expect=7e-16]} {Smed: dd_Smed_v6_5783_1_1, dd_Smed_v6_5783_1_1, [RH, Score=104, Expect=5e-28]} {RNA1509_13816, RNA1509_23134, RNA1509_38178, RNA1509_46731} {RNA1310_20736, RNA1509_13816, RNA1509_23134, RNA1509_38178, RNA1509_46731} {RNA1509_13816, RNA1509_23134, RNA1509_38178, RNA1509_46731, RNA815_39575} |
| 5. | MligTC455_46503 | 346 | 7.2 | Mlig455_021436 | Neo: Int S/G2/M Age: - Region-specific R5: 2.162 Region-enriched R5: 1.904/0.00001 |
DNMT1 | 0.963 | - | - | - | 0.963 | - | - | Mlig455_021436 {REF} {Length: 5119} {TRANSSPLICED} {Pfam: C-5 cytosine-specific DNA methylase [PF00145.19, score=153.2]; Cytosine specific DNA methyltransferase replication foci domain [PF12047.10, score=110.0]; BAH domain [PF01426.20, score=57.9]} {Human: ENSG00000130816, DNMT1, DNA methyltransferase 1, [RH, Score=679, Expect=0.0]} {Mouse: ENSMUSG00000004099, Dnmt1, DNA methyltransferase (cytosine-5) 1, [RH, Score=670, Expect=0.0]} {RNA1509_13447, RNA1509_25930, RNA1509_34986} {RNA1310_1876, RNA1509_13447, RNA1509_25930, RNA1509_34986} {RNA1509_13447, RNA1509_25930, RNA1509_34986, RNA815_6740} |
| 6. | MligTC455_51302 | 430 | 8.96 | Mlig455_027390 | Neo: - Age: Down-Down-Up Region-enriched R5: 1.407/0.01233 |
TIMM22 | 0.962 | - | - | - | - | - | 0.962 | Mlig455_027390 {REF} {Length: 1622} {TRANSSPLICED} {Pfam: Tim17/Tim22/Tim23/Pmp24 family [PF02466.21, score=94.4]} {Human: ENSG00000177370, TIMM22, translocase of inner mitochondrial membrane 22, [RH, Score=143, Expect=9e-43]; ENSG00000278501, TIMM22, translocase of inner mitochondrial membrane 22, [RH, Score=143, Expect=9e-43]; ENSG00000277649, TIMM22, translocase of inner mitochondrial membrane 22, [RH, Score=143, Expect=9e-43]} {Mouse: ENSMUSG00000020843, Timm22, translocase of inner mitochondrial membrane 22, [RH, Score=144, Expect=3e-43]} {Dmel: FBgn0051229, CG31229, [RH, Score=115, Expect=3e-32]} {Celegans: WBGene00008164, C47G2.3, Mitochondrial import inner membrane translocase subunit tim-22, [RH, Score=133, Expect=7e-39]} {Smed: dd_Smed_v6_9333_0_1, dd_Smed_v6_9333_0_1, [RH, Score=177, Expect=3e-56]} {RNA1509_23050, RNA1509_32512, RNA1509_50982} {RNA1310_46537, RNA1509_23050, RNA1509_32512, RNA1509_50982} {RNA1509_23050, RNA1509_32512, RNA1509_50982, RNA815_22653} |
| 7. | MligTC455_20164 | 49 | 1.02 | Mlig455_049842 | Neo: - Age: Up-Down-Up |
TEDC1 | 0.957 | - | - | - | - | - | 0.957 | Mlig455_049842 {REF} {Length: 2341} {TRANSSPLICED} {Pfam: Tubulin epsilon and delta complex protein 1 [PF14970.8, score=140.2]} {Human: ENSG00000185347, TEDC1, tubulin epsilon and delta complex 1, [Score=77.8, Expect=6e-15]} {Mouse: ENSMUSG00000037466, Tedc1, tubulin epsilon and delta complex 1, [Score=59.3, Expect=4e-09]} {Smed: dd_Smed_v6_15829_0_1, dd_Smed_v6_15829_0_1, [Score=69.3, Expect=9e-13]} {RNA1509_27695} {RNA1310_8427.1} {RNA815_8179.1} |
| 8. | MligTC455_12534 | 1611 | 33.55 | Mlig455_046860 | Neo: Int S/G2/M Age: - |
NOP53 | 0.956 | - | - | - | 0.956 | - | - | Mlig455_046860 {REF} {Length: 1829} {TRANSSPLICED} {Pfam: Nop53 (60S ribosomal biogenesis) [PF07767.13, score=161.6]} {Human: ENSG00000105373, NOP53, NOP53 ribosome biogenesis factor, [RH, Score=121, Expect=2e-29]} {Mouse: ENSMUSG00000041560, Nop53, NOP53 ribosome biogenesis factor, [RH, Score=117, Expect=2e-28]} {Dmel: FBgn0030061, CG1785, [RH, Score=82.4, Expect=1e-16]} {Celegans: WBGene00012692, Y39B6A.33, [RH, Score=53.9, Expect=1e-07]} {RNA1509_22656, RNA1509_4085} {RNA1310_16335, RNA1509_22656, RNA1509_4085} {RNA1509_22656, RNA1509_4085, RNA815_6216} |
| 9. | MligTC455_17124 | 484 | 10.08 | Mlig455_002400, Mlig455_060153 | Neo: Irradiation Age: Down-Up-Up Region-enriched R4: 2.442/0.02922 |
NFYC | 0.953 | - | - | - | - | - | 0.953 | Mlig455_002400 {REF} {Length: 2095} {Pfam: Histone-like transcription factor (CBF/NF-Y) and archaeal histone [PF00808.25, score=53.4]; Core histone H2A/H2B/H3/H4 [PF00125.26, score=39.9]} {Human: ENSG00000066136, NFYC, nuclear transcription factor Y subunit gamma, [Score=125, Expect=2e-32]} {Mouse: ENSMUSG00000032897, Nfyc, nuclear transcription factor-Y gamma, [Score=124, Expect=4e-33]} {Dmel: FBgn0029905, Nf-YC, Nuclear factor Y-box C, [Score=121, Expect=7e-31]} {Celegans: WBGene00017742, nfyc-1, Nuclear transcription factor Y subunit gamma, [RH, Score=104, Expect=9e-27]} {Smed: dd_Smed_v6_5610_0_1, dd_Smed_v6_5610_0_1, [Score=158, Expect=3e-46]} {RNA1509_28888} {RNA1310_21090.1, RNA1509_28888} {RNA1509_28888, RNA815_29133} Mlig455_060153 {REF} {Length: 2439} {Pfam: Histone-like transcription factor (CBF/NF-Y) and archaeal histone [PF00808.25, score=53.4]; Core histone H2A/H2B/H3/H4 [PF00125.26, score=39.9]} {Human: ENSG00000066136, NFYC, nuclear transcription factor Y subunit gamma, [Score=125, Expect=2e-32]} {Mouse: ENSMUSG00000032897, Nfyc, nuclear transcription factor-Y gamma, [Score=124, Expect=4e-33]} {Dmel: FBgn0029905, Nf-YC, Nuclear factor Y-box C, [Score=121, Expect=7e-31]} {Celegans: WBGene00017742, nfyc-1, Nuclear transcription factor Y subunit gamma, [RH, Score=104, Expect=9e-27]} {Smed: dd_Smed_v6_5610_0_1, dd_Smed_v6_5610_0_1, [Score=158, Expect=3e-46]} {RNA1509_28888} {RNA1310_21090.1} {RNA815_29133} |
| 10. | MligTC455_16410 | 313 | 6.52 | Mlig455_053945 | Neo: - Age: - |
0.952 | - | - | - | - | - | 0.952 | Mlig455_053945 {REF} {Length: 550} {NoTransDecoderORF} {RNA1509_49687, RNA1509_58070} {RNA1310_67924, RNA1509_58070} {RNA1509_58070, RNA815_48743} | |
| 11. | MligTC455_47497 | 103 | 2.15 | Mlig455_055557 | Neo: - Age: Down-Up-Down Regeneration-upregulated BL: 4.901 Regeneration-enriched BL: 4.901 |
0.951 | - | - | - | - | - | 0.951 | Mlig455_055557 {REF} {Length: 834} {NoTransDecoderORF} {RNA1509_24901} {RNA1310_65244} {RNA815_52866} | |
| 12. | MligTC455_29742 | 780 | 16.24 | Mlig455_049961 | Neo: - Age: - |
COX15 | 0.95 | - | - | - | 0.950 | - | - | Mlig455_049961 {REF} {Length: 3404} {TRANSSPLICED} {Pfam: Cytochrome oxidase assembly protein [PF02628.17, score=310.9]; Ankyrin repeats (many copies) [PF13637.8, score=81.5]; Ankyrin repeats (3 copies) [PF12796.9, score=76.3]; Ankyrin repeats (many copies) [PF13857.8, score=61.9]; Ankyrin repeat [PF00023.32, score=50.5]; Ankyrin repeat [PF13606.8, score=41.6]} {Human: ENSG00000014919, COX15, cytochrome c oxidase assembly homolog COX15, [RH, Score=355, Expect=5e-113]} {Mouse: ENSMUSG00000040018, Cox15, cytochrome c oxidase assembly protein 15, [RH, Score=350, Expect=3e-111]} {Dmel: FBgn0034938, CG3803, [RH, Score=345, Expect=1e-109]} {Celegans: WBGene00011526, cox-15, Cytochrome OXidase assembly protein, [RH, Score=378, Expect=2e-122]} {Smed: dd_Smed_v6_5059_0_1, dd_Smed_v6_5059_0_1, [RH, Score=406, Expect=2e-133]} {RNA1509_28052} {RNA1310_14237} {RNA815_9503} |