Data search
Results for MligTC455_12238
| Cluster | Total UMI counts | Global CPM | Transcripts | Categories | Human homolog | Annotation |
|---|---|---|---|---|---|---|
| MligTC455_12238 | 249 | 5.18 | Mlig455_015512 | Neo: Irradiation Age: logFC(26M/2M)=-0.488 Regeneration-upregulated R5: 2.536 Regeneration-enriched R5: 2.536 |
PDP2 | Mlig455_015512 {REF} {Length: 2946} {Pfam: Protein phosphatase 2C [PF00481.23, score=58.2]} {Human: ENSG00000172840, PDP2, pyruvate dehyrogenase phosphatase catalytic subunit 2, [Score=99.4, Expect=2e-21]; ENSG00000164951, PDP1, pyruvate dehyrogenase phosphatase catalytic subunit 1, [Score=96.7, Expect=1e-20]} {Mouse: ENSMUSG00000049225, Pdp1, pyruvate dehyrogenase phosphatase catalytic subunit 1, [Score=97.1, Expect=8e-21]} {Dmel: FBgn0029958, Pdp, Pyruvate dehydrogenase phosphatase, [Score=108, Expect=6e-25]} {Celegans: WBGene00022832, pdp-1, Pyruvate Dehydrogenase Phosphatase homolog, [Score=94.0, Expect=2e-20]} {Smed: dd_Smed_v6_4201_0_1, dd_Smed_v6_4201_0_1, [Score=119, Expect=4e-30]} {RNA1509_39535, RNA1509_40467, RNA1509_48674} {RNA1310_14443, RNA1509_39535, RNA1509_40467, RNA1509_48674} {RNA1509_39535, RNA1509_40467, RNA1509_48674, RNA815_18993} |
Cumulative graph for MligTC455_12238
Region-enriched expression
| Region | logFC | logCPM | Pvalue | FDR | Specificity |
|---|---|---|---|---|---|
| RegionR1 | -0.861 | 2.863 | 0.58626 | 1.00000 | |
| RegionR2 | 0.877 | 2.863 | 0.21207 | 0.57668 | |
| RegionR3 | -0.203 | 2.863 | 0.71587 | 1.00000 | |
| RegionR4 | -1.16 | 2.863 | 0.06209 | 0.22334 | |
| RegionR5 | -0.536 | 2.863 | 0.27439 | 0.60035 | |
| RegionR6 | 0.468 | 2.863 | 0.37658 | 0.95672 | |
| RegionR7 | 0.64 | 2.863 | 0.39968 | 1.00000 | |
| RegionR8 | 0.776 | 2.863 | 0.41778 | 1.00000 |
Regeneration-enriched expression
| Region | logFC | logCPM | PValue | FDR | Specificity |
|---|---|---|---|---|---|
| RegenerationR1 | -4.388 | 2.863 | 0.46111 | 1.00000 | |
| RegenerationR2 | -0.481 | 2.863 | 0.40110 | 0.81494 | |
| RegenerationR3 | 1.626 | 2.863 | 0.00554 | 0.13434 | |
| RegenerationR4 | 1.439 | 2.863 | 0.01450 | 0.18854 | |
| RegenerationR5 | 2.536 | 2.863 | 0.00000 | 0.00019 | Specific for R5: 2.536 |
| RegenerationR6 | 1.184 | 2.863 | 0.03355 | 0.22912 | |
| RegenerationBL | 0.103 | 2.863 | 0.89788 | 1.00000 | |
| RegenerationTP | -0.06 | 2.863 | 0.94633 | 1.00000 |
Genes with expression patterns similar to MligTC455_12238
| Nr. | Cluster | Total UMI counts | Global CPM | Transcripts | Categories | Human homolog | Σ Spearman correlations | Int1 | Int2 | Int3 | Reg1 | Reg2 | Reg3 | Annotation |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1. | MligTC455_12238 | 249 | 5.18 | Mlig455_015512 | Neo: Irradiation Age: logFC(26M/2M)=-0.488 Regeneration-upregulated R5: 2.536 Regeneration-enriched R5: 2.536 |
PDP2 | 6 | 1.000 | 1.000 | 1.000 | 1.000 | 1.000 | 1.000 | Mlig455_015512 {REF} {Length: 2946} {Pfam: Protein phosphatase 2C [PF00481.23, score=58.2]} {Human: ENSG00000172840, PDP2, pyruvate dehyrogenase phosphatase catalytic subunit 2, [Score=99.4, Expect=2e-21]; ENSG00000164951, PDP1, pyruvate dehyrogenase phosphatase catalytic subunit 1, [Score=96.7, Expect=1e-20]} {Mouse: ENSMUSG00000049225, Pdp1, pyruvate dehyrogenase phosphatase catalytic subunit 1, [Score=97.1, Expect=8e-21]} {Dmel: FBgn0029958, Pdp, Pyruvate dehydrogenase phosphatase, [Score=108, Expect=6e-25]} {Celegans: WBGene00022832, pdp-1, Pyruvate Dehydrogenase Phosphatase homolog, [Score=94.0, Expect=2e-20]} {Smed: dd_Smed_v6_4201_0_1, dd_Smed_v6_4201_0_1, [Score=119, Expect=4e-30]} {RNA1509_39535, RNA1509_40467, RNA1509_48674} {RNA1310_14443, RNA1509_39535, RNA1509_40467, RNA1509_48674} {RNA1509_39535, RNA1509_40467, RNA1509_48674, RNA815_18993} |
| 2. | MligTC455_15629 | 415 | 8.65 | Mlig455_004619 | Neo: Neoblast, stringent Age: - Region-enriched R5: 1.273/0.00412 Regeneration-upregulated R3: 2.136 Regeneration-enriched R3: 2.136 |
MCM2 | 2.635 | - | - | - | 0.962 | 0.896 | 0.777 | Mlig455_004619 {REF} {Length: 4217} {TRANSSPLICED} {Pfam: MCM P-loop domain [PF00493.25, score=330.2]; MCM OB domain [PF17207.5, score=130.7]; MCM AAA-lid domain [PF17855.3, score=109.4]; Mini-chromosome maintenance protein 2 [PF12619.10, score=55.8]; MCM N-terminal domain [PF14551.8, score=50.1]; Magnesium chelatase, subunit ChlI [PF01078.23, score=34.7]; AAA domain (dynein-related subfamily) [PF07728.16, score=18.6]} {Human: ENSG00000073111, MCM2, minichromosome maintenance complex component 2, [RH, Score=1056, Expect=0.0]} {Mouse: ENSMUSG00000002870, Mcm2, minichromosome maintenance complex component 2, [RH, Score=1046, Expect=0.0]} {Dmel: FBgn0014861, Mcm2, Minichromosome maintenance 2, [RH, Score=991, Expect=0.0]} {Celegans: WBGene00003154, mcm-2, Yeast MCM (Licensing factor) related, [RH, Score=895, Expect=0.0]} {Smed: dd_Smed_v6_7682_0_1, dd_Smed_v6_7682_0_1, [RH, Score=915, Expect=0.0]} {RNA1509_3101} {RNA1310_746.2} {RNA815_2497} |
| 3. | MligTC455_48574 | 911 | 18.97 | Mlig455_017568, Mlig455_026866, Mlig455_030829, Mlig455_047788 | Neo: - Age: Down-Up-Down |
IBA57 | 1.737 | - | - | - | 0.963 | - | 0.774 | Mlig455_017568 {REF} {Length: 1945} {TRANSSPLICED} {Pfam: Aminomethyltransferase folate-binding domain [PF01571.23, score=29.0]} {Human: ENSG00000181873, IBA57, IBA57, iron-sulfur cluster assembly, [RH, Score=188, Expect=3e-56]} {Mouse: ENSMUSG00000049287, Iba57, IBA57 homolog, iron-sulfur cluster assembly, [RH, Score=182, Expect=5e-54]} {Dmel: FBgn0037610, CG8043, [RH, Score=170, Expect=7e-50]} {Celegans: WBGene00009563, F39H2.3, [RH, Score=124, Expect=3e-33]} {Smed: dd_Smed_v6_7232_0_1, dd_Smed_v6_7232_0_1, [RH, Score=185, Expect=9e-56]} {RNA1509_13687} {RNA1310_14437} {RNA815_5296} Mlig455_026866 {REF} {Length: 1945} {TRANSSPLICED} {Pfam: Aminomethyltransferase folate-binding domain [PF01571.23, score=29.0]} {Human: ENSG00000181873, IBA57, IBA57, iron-sulfur cluster assembly, [RH, Score=188, Expect=3e-56]} {Mouse: ENSMUSG00000049287, Iba57, IBA57 homolog, iron-sulfur cluster assembly, [RH, Score=182, Expect=5e-54]} {Dmel: FBgn0037610, CG8043, [RH, Score=170, Expect=7e-50]} {Celegans: WBGene00009563, F39H2.3, [RH, Score=124, Expect=3e-33]} {Smed: dd_Smed_v6_7232_0_1, dd_Smed_v6_7232_0_1, [RH, Score=185, Expect=9e-56]} {RNA1509_13687} {RNA1310_14437} {RNA815_5296} Mlig455_030829 {REF} {Length: 1915} {TRANSSPLICED} {Pfam: Aminomethyltransferase folate-binding domain [PF01571.23, score=28.9]} {Human: ENSG00000181873, IBA57, IBA57, iron-sulfur cluster assembly, [RH, Score=188, Expect=3e-56]} {Mouse: ENSMUSG00000049287, Iba57, IBA57 homolog, iron-sulfur cluster assembly, [RH, Score=182, Expect=4e-54]} {Dmel: FBgn0037610, CG8043, [RH, Score=169, Expect=2e-49]} {Celegans: WBGene00009563, F39H2.3, [RH, Score=122, Expect=2e-32]} {Smed: dd_Smed_v6_7232_0_1, dd_Smed_v6_7232_0_1, [RH, Score=183, Expect=5e-55]} {RNA1509_13687} {RNA1310_14437} {RNA815_5296} Mlig455_047788 {REF} {Length: 1945} {TRANSSPLICED} {Pfam: Aminomethyltransferase folate-binding domain [PF01571.23, score=29.0]} {Human: ENSG00000181873, IBA57, IBA57, iron-sulfur cluster assembly, [RH, Score=188, Expect=3e-56]} {Mouse: ENSMUSG00000049287, Iba57, IBA57 homolog, iron-sulfur cluster assembly, [RH, Score=182, Expect=5e-54]} {Dmel: FBgn0037610, CG8043, [RH, Score=170, Expect=7e-50]} {Celegans: WBGene00009563, F39H2.3, [RH, Score=124, Expect=3e-33]} {Smed: dd_Smed_v6_7232_0_1, dd_Smed_v6_7232_0_1, [RH, Score=185, Expect=9e-56]} {RNA1509_13687} {RNA1310_14437, RNA1509_13687} {RNA1509_13687, RNA815_5296} |
| 4. | MligTC455_35591 | 131 | 2.73 | Mlig455_049066 | Neo: Int S/G2/M Age: - Region-enriched R5: 2.623/0.00653 |
1.721 | - | - | - | 0.751 | 0.970 | - | Mlig455_049066 {REF} {Length: 4256} {TRANSSPLICED} {RNA1509_19998} {RNA1310_6168, RNA1509_19998} {RNA1509_19998, RNA815_25757} | |
| 5. | MligTC455_39433 | 348 | 7.25 | Mlig455_067841 | Neo: - Age: Down-Up-Up Region-enriched R4: 3.187/0.00988 |
EXOSC8 | 1.705 | - | - | - | 0.749 | 0.956 | - | Mlig455_067841 {REF} {Length: 1741} {TRANSSPLICED} {Pfam: 3' exoribonuclease family, domain 1 [PF01138.23, score=65.0]} {Human: ENSG00000120699, EXOSC8, exosome component 8, [RH, Score=99.4, Expect=9e-24]} {Mouse: ENSMUSG00000027752, Exosc8, exosome component 8, [RH, Score=94.4, Expect=4e-22]} {RNA1509_38958} {RNA1310_20971, RNA1509_38958} {RNA1509_38958, RNA815_18350} |
| 6. | MligTC455_45641 | 460 | 9.59 | Mlig455_044942 | Neo: - Age: logFC(26M/2M)=0.242 |
NFAT5 | 1.668 | - | - | - | 0.710 | 0.958 | - | Mlig455_044942 {REF} {Length: 3006} {Pfam: Rel homology dimerisation domain [PF16179.7, score=44.4]} {Human: ENSG00000102908, NFAT5, nuclear factor of activated T cells 5, [Score=233, Expect=7e-64]} {Mouse: ENSMUSG00000003847, Nfat5, nuclear factor of activated T cells 5, [Score=232, Expect=8e-64]} {Dmel: FBgn0030505, NFAT, NFAT nuclear factor, [Score=197, Expect=1e-54]} {Smed: dd_Smed_v6_5978_0_1, dd_Smed_v6_5978_0_1, [Score=226, Expect=6e-63]} {RNA1509_28577} {RNA1310_10750, RNA1509_28577} {RNA1509_28577, RNA815_11298} |
| 7. | MligTC455_27922 | 448 | 9.33 | Mlig455_063289 | Neo: - Age: logFC(26M/2M)=0.662 Region-enriched R5: 1.115/0.00885 |
ACP7 | 0.96 | - | - | - | - | 0.960 | - | Mlig455_063289 {REF} {Length: 2304} {Pfam: Calcineurin-like phosphoesterase [PF00149.30, score=89.4]; Iron/zinc purple acid phosphatase-like protein C [PF14008.8, score=68.8]; Purple acid Phosphatase, N-terminal domain [PF16656.7, score=57.1]} {Human: ENSG00000183760, ACP7, acid phosphatase 7, tartrate resistant (putative), [RH, Score=422, Expect=1e-144]} {Mouse: ENSMUSG00000037469, Acp7, acid phosphatase 7, tartrate resistant, [Score=426, Expect=9e-146]} {Dmel: FBgn0030245, CG1637, [RH, Score=427, Expect=7e-147]} {Celegans: WBGene00219316, F21A3.11, Purple acid phosphatase, [Score=358, Expect=2e-119]} {Smed: dd_Smed_v6_2643_0_1, dd_Smed_v6_2643_0_1, [RH, Score=394, Expect=5e-134]} {RNA1509_17577} {RNA1310_12439, RNA1509_17577} {RNA1509_17577, RNA815_4397} |
| 8. | MligTC455_12534 | 1611 | 33.55 | Mlig455_046860 | Neo: Int S/G2/M Age: - |
NOP53 | 0.958 | - | - | - | 0.958 | - | - | Mlig455_046860 {REF} {Length: 1829} {TRANSSPLICED} {Pfam: Nop53 (60S ribosomal biogenesis) [PF07767.13, score=161.6]} {Human: ENSG00000105373, NOP53, NOP53 ribosome biogenesis factor, [RH, Score=121, Expect=2e-29]} {Mouse: ENSMUSG00000041560, Nop53, NOP53 ribosome biogenesis factor, [RH, Score=117, Expect=2e-28]} {Dmel: FBgn0030061, CG1785, [RH, Score=82.4, Expect=1e-16]} {Celegans: WBGene00012692, Y39B6A.33, [RH, Score=53.9, Expect=1e-07]} {RNA1509_22656, RNA1509_4085} {RNA1310_16335, RNA1509_22656, RNA1509_4085} {RNA1509_22656, RNA1509_4085, RNA815_6216} |
| 9. | MligTC455_29283 | 58 | 1.2 | Mlig455_030036 | Neo: - Age: logFC(26M/2M)=0.357 |
URGCP | 0.956 | - | - | - | 0.956 | - | - | Mlig455_030036 {REF} {Length: 7780} {TRANSSPLICED} {Pfam: Root hair defective 3 GTP-binding protein (RHD3) [PF05879.14, score=25.8]; Dynamin family [PF00350.25, score=21.3]; 50S ribosome-binding GTPase [PF01926.25, score=19.3]; Guanylate-binding protein, N-terminal domain [PF02263.21, score=19.0]} {Human: ENSG00000106608, URGCP, upregulator of cell proliferation, [Score=123, Expect=2e-27]} {Mouse: ENSMUSG00000078606, Gm4070, predicted gene 4070, [RH, Score=523, Expect=5e-153]; ENSMUSG00000045868, Gvin1, GTPase, very large interferon inducible 1, [RH, Score=521, Expect=2e-152]} {RNA1509_16396, RNA1509_46736, RNA1509_52232} {RNA1310_766.1, RNA1509_46736, RNA1509_52232} {RNA1509_46736, RNA1509_52232, RNA815_2094.1} |
| 10. | MligTC455_29358 | 289 | 6.03 | Mlig455_017627 | Neo: - Age: - Region-enriched R4: 1.896/0.00270 |
DUSP19 | 0.956 | - | - | - | 0.956 | - | - | Mlig455_017627 {REF} {Length: 903} {Pfam: Dual specificity phosphatase, catalytic domain [PF00782.22, score=94.0]; Rit1 DUSP-like domain [PF04179.14, score=19.0]} {Human: ENSG00000162999, DUSP19, dual specificity phosphatase 19, [RH, Score=99.0, Expect=1e-25]} {Mouse: ENSMUSG00000026659, Dusp12, dual specificity phosphatase 12, [RH, Score=102, Expect=1e-27]} {Dmel: FBgn0031044, MKP-4, MAPK Phosphatase 4, [Score=130, Expect=1e-36]} {Celegans: WBGene00007697, C24F3.2, [Score=79.7, Expect=3e-18]} {Smed: dd_Smed_v6_11821_0_1, dd_Smed_v6_11821_0_1, [Score=97.1, Expect=1e-24]} {RNA1509_48408} {RNA1310_43020.1} {RNA815_21173} |
| 11. | MligTC455_44989 | 6960 | 145 | Mlig455_069324 | Neo: - Age: logFC(26M/2M)=0.260 Region-enriched R4: 1.074/0.01168 |
GYG1 | 0.956 | - | - | - | 0.956 | - | - | Mlig455_069324 {REF} {Length: 3749} {TRANSSPLICED} {Pfam: Glycosyl transferase family 8 [PF01501.22, score=86.9]; Nucleotide-diphospho-sugar transferase [PF03407.18, score=19.4]} {Human: ENSG00000163754, GYG1, glycogenin 1, [RH, Score=306, Expect=7e-99]} {Mouse: ENSMUSG00000019528, Gyg, glycogenin, [RH, Score=311, Expect=2e-100]} {Dmel: FBgn0265191, Glycogenin, [RH, Score=303, Expect=1e-93]} {Celegans: WBGene00006863, gyg-1, Glycogenin-1, [RH, Score=258, Expect=1e-79]} {Smed: dd_Smed_v6_647_1_1, dd_Smed_v6_647_1_1, [RH, Score=362, Expect=2e-121]} {RNA1509_31124, RNA1509_511} {RNA1310_1979.3, RNA1509_31124} {RNA1509_31124, RNA815_13036.1} |
| 12. | MligTC455_38535 | 3333 | 69.44 | Mlig455_023472, Mlig455_068127 | Neo: Neoblast Age: logFC(26M/2M)=0.508 |
OSBP, PSMB7 | 0.95 | - | - | - | - | - | 0.950 | Mlig455_023472 {REF} {Length: 3591} {TRANSSPLICED} {Pfam: Oxysterol-binding protein [PF01237.20, score=250.3]} {Human: ENSG00000110048, OSBP, oxysterol binding protein, [Score=206, Expect=1e-59]; ENSG00000184792, OSBP2, oxysterol binding protein 2, [Score=196, Expect=7e-57]} {Mouse: ENSMUSG00000024687, Osbp, oxysterol binding protein, [Score=202, Expect=2e-58]} {Dmel: FBgn0020626, Osbp, Oxysterol binding protein, [Score=155, Expect=8e-42]} {Celegans: WBGene00012930, obr-1, Oxysterol-binding protein, [Score=193, Expect=1e-57]} {Smed: dd_Smed_v6_3268_0_1, dd_Smed_v6_3268_0_1, [Score=214, Expect=1e-62]} {RNA1509_11730} {RNA1310_16755.1} {RNA815_1476.1} Mlig455_068127 {REF} {Length: 1786} {TRANSSPLICED} {Pfam: Proteasome subunit [PF00227.28, score=169.3]} {Human: ENSG00000136930, PSMB7, proteasome subunit beta 7, [RH, Score=312, Expect=9e-107]} {Mouse: ENSMUSG00000026750, Psmb7, proteasome (prosome, macropain) subunit, beta type 7, [RH, Score=311, Expect=1e-106]} {Dmel: FBgn0023174, Prosbeta2, Proteasome beta2 subunit, [RH, Score=285, Expect=2e-96]} {Celegans: WBGene00003948, pbs-2, Proteasome subunit beta type, [RH, Score=191, Expect=8e-60]} {Smed: dd_Smed_v6_1264_0_1, dd_Smed_v6_1264_0_1, [RH, Score=298, Expect=4e-102]} {RNA1509_11730, RNA1509_2176, RNA1509_7072} {RNA1310_16755.1, RNA1509_11730, RNA1509_2176, RNA1509_7072} {RNA1509_11730, RNA1509_2176, RNA1509_7072, RNA815_14858} |