TomoSeq data search

Data search

Results for MligTC455_48577

Cluster

Total UMI counts

Global CPM

Transcripts

Categories

Human homolog

Annotation

MligTC455_48577

51

1.05

Mlig455_028218

Neo: -

Age: -

Mlig455_028218 {REF} {Length: 177} {NoTransDecoderORF} {RNA1509_33890} {RNA1310_2889.1} {RNA815_920.1}

Cumulative graph for MligTC455_48577

Region-enriched expression

Region	logFC	logCPM	Pvalue	FDR	Specificity
RegionR1	-7.759	1.151	0.99958	1.00000
RegionR2	3.424	1.151	0.22104	0.58996
RegionR3	1.299	1.151	0.52477	1.00000
RegionR4	-2.44	1.151	0.98456	1.00000
RegionR5	-2.466	1.151	1.00000	1.00000
RegionR6	1.642	1.151	0.37292	0.95364
RegionR7	3.04	1.151	0.12007	0.65472
RegionR8	3.261	1.151	0.14905	0.70262

Regeneration-enriched expression

Region	logFC	logCPM	PValue	FDR	Specificity
RegenerationR1	2.258	1.151	0.99906	1.00000
RegenerationR2	-1.118	1.151	0.62494	0.92479
RegenerationR3	0.248	1.151	0.89179	1.00000
RegenerationR4	2.105	1.151	0.50832	0.87368
RegenerationR5	2.931	1.151	0.15554	0.57578
RegenerationR6	0.491	1.151	0.85373	1.00000
RegenerationBL	-4.967	1.151	0.19376	0.52946
RegenerationTP	-1.021	1.151	0.64785	0.98802

Genes with expression patterns similar to MligTC455_48577

Nr.	Cluster	Total UMI counts	Global CPM	Transcripts	Categories	Human homolog	Σ Spearman correlations	Int1	Int2	Int3	Reg1	Reg2	Reg3	Annotation
1.	MligTC455_48577	51	1.05	Mlig455_028218	Neo: - Age: -		3	-	-	1.000	1.000	1.000	-	Mlig455_028218 {REF} {Length: 177} {NoTransDecoderORF} {RNA1509_33890} {RNA1310_2889.1} {RNA815_920.1}
2.	MligTC455_12603	37	0.76	Mlig455_012565	Neo: - Age: -		0.995	-	-	-	-	0.995	-	Mlig455_012565 {REF} {Length: 1526} {NoTransDecoderORF} {RNA1509_7456} {RNA1310_20308} {RNA815_9582.1}
3.	MligTC455_15105	41	0.85	Mlig455_003338, Mlig455_062845	Neo: - Age: -		0.966	-	-	-	0.966	-	-	Mlig455_003338 {REF} {Length: 2086} {TRANSSPLICED} {RNA1509_29866} {RNA1310_5035.1} {RNA815_5418.1} Mlig455_062845 {REF} {Length: 2177} {TRANSSPLICED} {RNA1509_29866} {RNA1310_6337.1} {RNA815_5418.1}
4.	MligTC455_30621	23	0.49	Mlig455_037278	Neo: - Age: -	CUBN	0.966	-	-	-	-	0.966	-	Mlig455_037278 {REF} {Length: 4362} {Pfam: CUB domain [PF00431.22, score=218.5]; CUB-like domain [PF02408.22, score=43.3]} {Human: ENSG00000107611, CUBN, cubilin, [Score=89.0, Expect=5e-17]} {Mouse: ENSMUSG00000025013, Tll2, tolloid-like 2, [Score=89.7, Expect=1e-17]} {Dmel: FBgn0031879, uif, uninflatable, [Score=59.3, Expect=2e-08]} {Celegans: WBGene00011222, R10H10.3, [Score=52.4, Expect=1e-06]} {Smed: dd_Smed_v6_5652_0_1, dd_Smed_v6_5652_0_1, [Score=81.3, Expect=2e-15]} {RNA1509_23859} {RNA1310_29058.1} {RNA815_1199.1}
5.	MligTC455_36247	276	5.75	Mlig455_047147	Neo: - Age: -		0.963	-	-	-	-	0.963	-	Mlig455_047147 {REF} {Length: 6984} {Smed: dd_Smed_v6_9728_0_2, dd_Smed_v6_9728_0_2, [RH, Score=90.5, Expect=1e-18]} {RNA1509_35531} {RNA1310_31312, RNA1509_35531} {RNA1509_35531, RNA815_29466}
6.	MligTC455_37007	1046	21.79	Mlig455_025758, Mlig455_064376	Neo: - Age: logFC(26M/2M)=-0.452 Region-enriched R8: 2.557/0.00000 Region-enriched R7: 2.027/0.00017 Regeneration-downregulated BL: -3.225 Regeneration-depleted BL: -3.225		0.958	-	-	-	-	0.958	-	Mlig455_025758 {REF} {Length: 1194} {Pfam: Neurensin [PF14927.8, score=39.7]; Uncharacterised conserved protein (DUF2371) [PF10177.11, score=21.6]} {RNA1509_51128} {RNA1310_51502.1, RNA1509_51128} {RNA1509_51128, RNA815_17212} Mlig455_064376 {REF} {Length: 1196} {Pfam: Neurensin [PF14927.8, score=41.9]; Uncharacterised conserved protein (DUF2371) [PF10177.11, score=20.6]} {RNA1509_51128} {RNA1310_51502.1} {RNA815_17212}
7.	MligTC455_31185	18	0.37	Mlig455_044975	Neo: - Age: -		0.956	-	-	-	-	0.956	-	Mlig455_044975 {REF} {Length: 682} {RNA1509_38155} {RNA1310_23095} {RNA815_12881}
8.	MligTC455_52252	1382	28.78	Mlig455_024739	Neo: - Age: logFC(26M/2M)=0.552 Region-enriched R7: 1.831/0.00005 Region-enriched R8: 1.551/0.03354	CD63	0.956	-	-	-	-	0.956	-	Mlig455_024739 {REF} {Length: 1912} {Pfam: Tetraspanin family [PF00335.22, score=139.2]} {Human: ENSG00000135404, CD63, CD63 molecule, [Score=84.7, Expect=8e-19]} {Mouse: ENSMUSG00000025351, Cd63, CD63 antigen, [Score=79.0, Expect=7e-17]; ENSMUSG00000027215, Cd82, CD82 antigen, [Score=78.2, Expect=2e-16]} {Dmel: FBgn0035936, Tsp66E, Tetraspanin 66E, [Score=98.6, Expect=6e-24]} {Celegans: WBGene00006637, tsp-11, Tetraspanin, [RH, Score=75.5, Expect=1e-15]} {Smed: dd_Smed_v6_2698_0_1, dd_Smed_v6_2698_0_1, [RH, Score=159, Expect=3e-47]} {RNA1509_12441} {RNA1310_16211, RNA1509_12441} {RNA1509_12441, RNA815_7034.1}
9.	MligTC455_06327	233	4.84	Mlig455_055562	Neo: - Age: - Region-enriched R7: 1.919/0.03469	SVEP1	0.955	-	-	-	-	0.955	-	Mlig455_055562 {REF} {Length: 5845} {TRANSSPLICED} {Pfam: EGF-like domain [PF00008.29, score=38.0]; Human growth factor-like EGF [PF12661.9, score=29.8]; EGF-like domain [PF07974.15, score=21.0]} {Human: ENSG00000165124, SVEP1, sushi, von Willebrand factor type A, EGF and pentraxin domain containing 1, [Score=105, Expect=1e-22]; ENSG00000235396, NOTCH4, notch 4, [Score=103, Expect=6e-22]; ENSG00000223355, NOTCH4, notch 4, [Score=103, Expect=6e-22]; ENSG00000204301, NOTCH4, notch 4, [Score=103, Expect=6e-22]; ENSG00000234876, NOTCH4, notch 4, [Score=103, Expect=6e-22]; ENSG00000206312, NOTCH4, notch 4, [Score=103, Expect=6e-22]; ENSG00000232339, NOTCH4, notch 4, [Score=103, Expect=6e-22]} {Mouse: ENSMUSG00000026923, Notch1, notch 1, [Score=92.8, Expect=8e-19]; ENSMUSG00000027878, Notch2, notch 2, [Score=88.6, Expect=2e-17]} {Dmel: FBgn0051665, wry, weary, [Score=118, Expect=5e-27]} {Celegans: WBGene00018547, clec-78, C-type LECtin, [Score=84.7, Expect=2e-16]} {Smed: dd_Smed_v6_7067_0_1, dd_Smed_v6_7067_0_1, [Score=103, Expect=2e-22]} {RNA1509_34591} {RNA1310_8018.1} {RNA815_13609}
10.	MligTC455_34783	202	4.21	Mlig455_027462	Neo: - Age: Up-Down-Down	PRKN	0.954	-	-	-	-	0.954	-	Mlig455_027462 {REF} {Length: 2768} {TRANSSPLICED} {Pfam: RING/Ubox like zinc-binding domain [PF17978.3, score=48.0]; IBR domain, a half RING-finger domain [PF01485.23, score=27.9]} {Human: ENSG00000185345, PRKN, parkin RBR E3 ubiquitin protein ligase, [RH, Score=148, Expect=2e-39]} {Mouse: ENSMUSG00000023826, Prkn, parkin RBR E3 ubiquitin protein ligase, [RH, Score=143, Expect=9e-38]} {Dmel: FBgn0041100, park, parkin, [RH, Score=160, Expect=4e-44]} {Celegans: WBGene00003967, pdr-1, Parkinson's Disease Related, [RH, Score=119, Expect=6e-30]} {Smed: dd_Smed_v6_4224_0_1, dd_Smed_v6_4224_0_1, [Score=65.5, Expect=2e-11]} {RNA1509_38583, RNA1509_45133, RNA1509_55363} {RNA1310_23081.1, RNA1509_38583, RNA1509_45133, RNA1509_55363} {RNA1509_38583, RNA1509_45133, RNA1509_55363, RNA815_10648}
11.	MligTC455_42192	193	4.03	Mlig455_014551, Mlig455_048360	Neo: - Age: Down-Down-Up, logFC(26M/2M)=-0.405		0.953	-	-	0.953	-	-	-	Mlig455_014551 {REF} {Length: 1927} {TRANSSPLICED} {Pfam: Glycosyltransferase sugar-binding region containing DXD motif [PF04488.17, score=52.9]; Capsular polysaccharide synthesis protein [PF05704.14, score=18.8]} {Smed: dd_Smed_v6_6819_0_1, dd_Smed_v6_6819_0_1, [Score=144, Expect=4e-40]} {RNA1509_15387} {RNA1310_18607} {RNA815_7321} Mlig455_048360 {REF} {Length: 1891} {Pfam: Glycosyltransferase sugar-binding region containing DXD motif [PF04488.17, score=37.1]; Capsular polysaccharide synthesis protein [PF05704.14, score=19.6]} {Smed: dd_Smed_v6_7249_0_1, dd_Smed_v6_7249_0_1, [Score=110, Expect=4e-29]} {RNA1509_15387} {RNA1310_18607} {RNA815_7321}
12.	MligTC455_25181	2947	61.4	Mlig455_016583, Mlig455_016639, Mlig455_035594, Mlig455_035605, Mlig455_051883	Neo: - Age: logFC(26M/2M)=-0.369 Region-enriched R7: 3.379/0.00000 Regeneration-downregulated BL: -3.511 Regeneration-depleted BL: -3.511		0.952	-	-	-	-	0.952	-	Mlig455_016583 {REF} {Length: 2083} {Pfam: Calcium-activated potassium channel, beta subunit [PF03185.17, score=45.3]} {Smed: dd_Smed_v6_12880_0_1, dd_Smed_v6_12880_0_1, [Score=82.4, Expect=1e-18]} {RNA1509_22294} {RNA1310_28969} {RNA815_14223} Mlig455_016639 {REF} {Length: 2081} {Pfam: Calcium-activated potassium channel, beta subunit [PF03185.17, score=20.8]} {Smed: dd_Smed_v6_12880_0_1, dd_Smed_v6_12880_0_1, [Score=63.5, Expect=2e-12]} {RNA1509_22294} {RNA1310_28969} {RNA815_14223} Mlig455_035594 {REF} {Length: 986} {Pfam: Calcium-activated potassium channel, beta subunit [PF03185.17, score=46.3]} {Smed: dd_Smed_v6_12880_0_1, dd_Smed_v6_12880_0_1, [Score=82.8, Expect=3e-19]} {RNA1509_50243} {RNA1310_28969} {RNA815_14223} Mlig455_035605 {REF} {Length: 2250} {Pfam: Calcium-activated potassium channel, beta subunit [PF03185.17, score=46.3]} {Smed: dd_Smed_v6_12880_0_1, dd_Smed_v6_12880_0_1, [Score=82.0, Expect=6e-19]} {RNA1509_58072} {RNA1310_28969} {RNA815_14223} Mlig455_051883 {REF} {Length: 914} {Pfam: Calcium-activated potassium channel, beta subunit [PF03185.17, score=45.3]} {Smed: dd_Smed_v6_12880_0_1, dd_Smed_v6_12880_0_1, [Score=82.4, Expect=1e-18]} {RNA1509_50243} {RNA1310_28969} {RNA815_14223}
13.	MligTC455_31513	254	5.29	Mlig455_036847, Mlig455_052983	Neo: - Age: -	CAPN5	0.951	-	-	0.951	-	-	-	Mlig455_036847 {REF} {Length: 4572} {TRANSSPLICED} {Pfam: Calpain family cysteine protease [PF00648.23, score=189.2]; Calpain large subunit, domain III [PF01067.24, score=50.9]; C2 domain [PF00168.32, score=34.3]} {Human: ENSG00000149260, CAPN5, calpain 5, [Score=298, Expect=2e-91]} {Mouse: ENSMUSG00000035547, Capn5, calpain 5, [Score=297, Expect=6e-91]} {Dmel: FBgn0012051, CalpA, Calpain-A, [Score=184, Expect=3e-50]} {Celegans: WBGene00006606, tra-3, Calpain-5, [Score=198, Expect=8e-55]} {Smed: dd_Smed_v6_3864_0_1, dd_Smed_v6_3864_0_1, [RH, Score=201, Expect=5e-56]} {RNA1509_18066} {RNA1310_11620, RNA1509_18066} {RNA1509_18066, RNA815_3340} Mlig455_052983 {REF} {Length: 4195} {Pfam: Calpain family cysteine protease [PF00648.23, score=62.2]; Calpain large subunit, domain III [PF01067.24, score=51.2]; C2 domain [PF00168.32, score=34.7]} {Human: ENSG00000149260, CAPN5, calpain 5, [Score=185, Expect=1e-50]} {Mouse: ENSMUSG00000035547, Capn5, calpain 5, [Score=187, Expect=1e-51]} {Dmel: FBgn0012051, CalpA, Calpain-A, [Score=91.7, Expect=3e-19]} {Celegans: WBGene00006606, tra-3, Calpain-5, [Score=114, Expect=1e-26]} {Smed: dd_Smed_v6_8673_0_1, dd_Smed_v6_8673_0_1, [Score=110, Expect=4e-25]} {RNA1509_18066} {RNA1310_11620} {RNA815_3340}

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