TomoSeq data search

Data search

Results for MligTC455_48710

Cluster

Total UMI counts

Global CPM

Transcripts

Categories

Human homolog

Annotation

MligTC455_48710

1056

22.01

Mlig455_041821

Neo: Int S/G2/M

Age: Down-Up-Up

Region-enriched R5: 1.886/0.00000
Region-enriched R4: 1.348/0.00643

MRPL40

Mlig455_041821 {REF} {Length: 1102} {TRANSSPLICED} {Pfam: Mitochondrial ribosomal protein L28 [PF09812.11, score=90.3]} {Human: ENSG00000185608, MRPL40, mitochondrial ribosomal protein L40, [RH, Score=47.8, Expect=2e-06]} {Mouse: ENSMUSG00000022706, Mrpl40, mitochondrial ribosomal protein L40, [RH, Score=72.8, Expect=1e-15]} {Dmel: FBgn0037892, mRpL40, mitochondrial ribosomal protein L40, [RH, Score=92.8, Expect=2e-23]} {Smed: dd_Smed_v6_2475_0_1, dd_Smed_v6_2475_0_1, [RH, Score=95.1, Expect=2e-24]} {RNA1509_10286, RNA1509_29012} {RNA1310_40438, RNA1509_10286, RNA1509_29012} {RNA1509_10286, RNA1509_29012, RNA815_21548}

Cumulative graph for MligTC455_48710

Region-enriched expression

Region	logFC	logCPM	Pvalue	FDR	Specificity
RegionR1	-2.478	4.666	0.03445	0.46380
RegionR2	-0.14	4.666	0.76150	1.00000
RegionR3	0.179	4.666	0.63338	1.00000
RegionR4	1.348	4.666	0.00055	0.00643
RegionR5	1.886	4.666	0.00000	0.00000
RegionR6	0.802	4.666	0.02639	0.29786
RegionR7	-0.386	4.666	0.46059	1.00000
RegionR8	-1.211	4.666	0.09168	0.57187

Regeneration-enriched expression

Region	logFC	logCPM	PValue	FDR	Specificity
RegenerationR1	0.539	4.666	0.76749	1.00000
RegenerationR2	-0.399	4.666	0.24850	0.69499
RegenerationR3	0.149	4.666	0.68032	0.94051
RegenerationR4	0.045	4.666	0.89863	1.00000
RegenerationR5	-0.302	4.666	0.32598	0.74808
RegenerationR6	-0.034	4.666	0.92307	1.00000
RegenerationBL	0.206	4.666	0.65811	0.99316
RegenerationTP	1.416	4.666	0.00469	0.11383

Genes with expression patterns similar to MligTC455_48710

Nr.	Cluster	Total UMI counts	Global CPM	Transcripts	Categories	Human homolog	Σ Spearman correlations	Int1	Int2	Int3	Reg1	Reg2	Reg3	Annotation
1.	MligTC455_48710	1056	22.01	Mlig455_041821	Neo: Int S/G2/M Age: Down-Up-Up Region-enriched R5: 1.886/0.00000 Region-enriched R4: 1.348/0.00643	MRPL40	6	1.000	1.000	1.000	1.000	1.000	1.000	Mlig455_041821 {REF} {Length: 1102} {TRANSSPLICED} {Pfam: Mitochondrial ribosomal protein L28 [PF09812.11, score=90.3]} {Human: ENSG00000185608, MRPL40, mitochondrial ribosomal protein L40, [RH, Score=47.8, Expect=2e-06]} {Mouse: ENSMUSG00000022706, Mrpl40, mitochondrial ribosomal protein L40, [RH, Score=72.8, Expect=1e-15]} {Dmel: FBgn0037892, mRpL40, mitochondrial ribosomal protein L40, [RH, Score=92.8, Expect=2e-23]} {Smed: dd_Smed_v6_2475_0_1, dd_Smed_v6_2475_0_1, [RH, Score=95.1, Expect=2e-24]} {RNA1509_10286, RNA1509_29012} {RNA1310_40438, RNA1509_10286, RNA1509_29012} {RNA1509_10286, RNA1509_29012, RNA815_21548}
2.	MligTC455_49673	605	12.59	Mlig455_013646	Neo: - Age: -		0.963	-	-	-	0.963	-	-	Mlig455_013646 {REF} {Length: 2010} {TRANSSPLICED} {Pfam: Fis1 C-terminal tetratricopeptide repeat [PF14853.8, score=67.1]; Tetratricopeptide repeat [PF13428.8, score=22.2]} {Dmel: FBgn0039969, Fis1, Fission, mitochondrial 1, [RH, Score=68.9, Expect=3e-15]} {Celegans: WBGene00001425, fis-2, Mitochondrial fission 1 protein, [RH, Score=78.6, Expect=5e-19]} {Smed: dd_Smed_v6_4171_0_1, dd_Smed_v6_4171_0_1, [RH, Score=77.8, Expect=5e-19]} {RNA1509_17552, RNA1509_26876, RNA1509_43296} {RNA1310_32255.1, RNA1509_17552, RNA1509_26876, RNA1509_43296} {RNA1509_17552, RNA1509_26876, RNA1509_43296, RNA815_11325}
3.	MligTC455_46203	3770	78.55	Mlig455_049752	Neo: - Age: - Region-enriched R7: 1.760/0.00000	CALU	0.961	-	-	-	0.961	-	-	Mlig455_049752 {REF} {Length: 2079} {TRANSSPLICED} {Pfam: EF hand [PF00036.34, score=66.3]; EF-hand domain pair [PF13499.8, score=58.7]; EF hand [PF13202.8, score=57.6]; EF-hand domain [PF13405.8, score=49.2]; EF-hand domain pair [PF13833.8, score=37.7]; Secreted protein acidic and rich in cysteine Ca binding region [PF10591.11, score=29.0]} {Human: ENSG00000128595, CALU, calumenin, [RH, Score=283, Expect=6e-94]} {Mouse: ENSMUSG00000029767, Calu, calumenin, [RH, Score=281, Expect=1e-93]; ENSMUSG00000005973, Rcn1, reticulocalbin 1, [RH, Score=270, Expect=4e-89]} {Dmel: FBgn0025682, scf, supercoiling factor, [RH, Score=262, Expect=4e-86]} {Celegans: WBGene00019760, calu-1, CALUmenin (Calcium-binding protein) homolog; Calumenin-like protein, [RH, Score=246, Expect=3e-80]} {Smed: dd_Smed_v6_1417_0_1, dd_Smed_v6_1417_0_1, [RH, Score=291, Expect=4e-98]} {RNA1509_17778, RNA1509_19441, RNA1509_22170, RNA1509_3183, RNA1509_53504, RNA1509_8953} {RNA1310_12875, RNA1509_17778, RNA1509_19441, RNA1509_22170, RNA1509_3183, RNA1509_53504, RNA1509_8953} {RNA1509_17778, RNA1509_19441, RNA1509_22170, RNA1509_3183, RNA1509_53504, RNA1509_8953, RNA815_4462.2}
4.	MligTC455_45060	1779	37.06	Mlig455_036431	Neo: Int S/G2/M Age: logFC(26M/2M)=0.366	AIMP1	0.96	-	-	-	-	-	0.960	Mlig455_036431 {REF} {Length: 1151} {TRANSSPLICED} {Pfam: Putative tRNA binding domain [PF01588.22, score=104.3]} {Human: ENSG00000164022, AIMP1, aminoacyl tRNA synthetase complex interacting multifunctional protein 1, [RH, Score=207, Expect=2e-64]} {Mouse: ENSMUSG00000028029, Aimp1, aminoacyl tRNA synthetase complex-interacting multifunctional protein 1, [RH, Score=208, Expect=4e-65]} {Dmel: FBgn0033351, AIMP1, aaRS-interacting multifunctional protein 1, [RH, Score=191, Expect=2e-58]} {Celegans: WBGene00003415, mars-1, Methionine--tRNA ligase, cytoplasmic, [RH, Score=188, Expect=1e-57]} {Smed: dd_Smed_v6_1675_0_1, dd_Smed_v6_1675_0_1, [RH, Score=199, Expect=1e-61]} {RNA1509_15171} {RNA1310_24605, RNA1509_15171} {RNA1509_15171, RNA815_2241.1}
5.	MligTC455_51543	1475	30.72	Mlig455_068019	Neo: Int S/G2/M Age: -		0.958	-	-	-	-	0.958	-	Mlig455_068019 {REF} {Length: 1361} {TRANSSPLICED} {RNA1509_11280, RNA1509_35173} {RNA1310_24438, RNA1509_11280, RNA1509_35173} {RNA1509_11280, RNA1509_35173, RNA815_10764}

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