Data search


search
Exact
Search

Results for MligTC455_48723

Cluster Total UMI counts Global CPM Transcripts Categories Human homolog Annotation
MligTC455_48723 618 12.88 Mlig455_022865

Neo: -

Age: -

ZNF143 Mlig455_022865 {REF} {Length: 6932} {TRANSSPLICED} {Pfam: Zinc finger, C2H2 type [PF00096.28, score=44.0]; C2H2-type zinc finger [PF13894.8, score=40.9]; Zinc-finger double domain [PF13465.8, score=25.3]} {Human: ENSG00000166478, ZNF143, zinc finger protein 143, [Score=95.1, Expect=3e-19]} {Mouse: ENSMUSG00000061079, Zfp143, zinc finger protein 143, [Score=96.7, Expect=7e-20]} {Dmel: FBgn0266450, Kr-h1, Kruppel homolog 1, [Score=87.0, Expect=6e-17]} {Celegans: WBGene00003847, blmp-1, B lymphocyte-induced maturation protein 1 homolog, [Score=64.7, Expect=4e-10]} {Smed: dd_Smed_v6_14937_0_1, dd_Smed_v6_14937_0_1, [Score=176, Expect=4e-45]} {RNA1509_3419} {RNA1310_7805} {RNA815_7091}

Cumulative graph for MligTC455_48723

Region-enriched expression

Region logFC logCPM Pvalue FDR Specificity
RegionR1 -6.994 3.89 0.03909 0.48281
RegionR2 0.999 3.89 0.24820 0.62571
RegionR3 0.449 3.89 0.61084 1.00000
RegionR4 1.422 3.89 0.08834 0.28281
RegionR5 1.171 3.89 0.11717 0.34047
RegionR6 1.356 3.89 0.06169 0.46563
RegionR7 1.699 3.89 0.02505 0.29736
RegionR8 -0.104 3.89 0.88666 1.00000

Regeneration-enriched expression

Region logFC logCPM PValue FDR Specificity
RegenerationR1 5.608 3.89 0.25112 0.96682
RegenerationR2 -0.167 3.89 0.71388 0.96134
RegenerationR3 0.372 3.89 0.47779 0.84842
RegenerationR4 -0.322 3.89 0.54594 0.89071
RegenerationR5 0.58 3.89 0.23116 0.66477
RegenerationR6 -0.114 3.89 0.82134 0.98745
RegenerationBL 0.355 3.89 0.53364 0.89335
RegenerationTP 0.634 3.89 0.33274 0.77689


Genes with expression patterns similar to MligTC455_48723

Nr. Cluster Total UMI counts Global CPM Transcripts Categories Human homolog Σ Spearman correlations Int1 Int2 Int3 Reg1 Reg2 Reg3 Annotation
1. MligTC455_48723 618 12.88 Mlig455_022865

Neo: -

Age: -

ZNF143 6 1.000 1.000 1.000 1.000 1.000 1.000 Mlig455_022865 {REF} {Length: 6932} {TRANSSPLICED} {Pfam: Zinc finger, C2H2 type [PF00096.28, score=44.0]; C2H2-type zinc finger [PF13894.8, score=40.9]; Zinc-finger double domain [PF13465.8, score=25.3]} {Human: ENSG00000166478, ZNF143, zinc finger protein 143, [Score=95.1, Expect=3e-19]} {Mouse: ENSMUSG00000061079, Zfp143, zinc finger protein 143, [Score=96.7, Expect=7e-20]} {Dmel: FBgn0266450, Kr-h1, Kruppel homolog 1, [Score=87.0, Expect=6e-17]} {Celegans: WBGene00003847, blmp-1, B lymphocyte-induced maturation protein 1 homolog, [Score=64.7, Expect=4e-10]} {Smed: dd_Smed_v6_14937_0_1, dd_Smed_v6_14937_0_1, [Score=176, Expect=4e-45]} {RNA1509_3419} {RNA1310_7805} {RNA815_7091}
2. MligTC455_48724 659 13.74 Mlig455_044324

Neo: -

Age: -

ZNF143 5.9 0.979 0.982 0.991 0.976 0.973 0.999 Mlig455_044324 {REF} {Length: 7051} {TRANSSPLICED} {Pfam: Zinc finger, C2H2 type [PF00096.28, score=53.8]; C2H2-type zinc finger [PF13894.8, score=43.2]; C2H2-type zinc-finger domain [PF13909.8, score=28.2]; Zinc-finger double domain [PF13465.8, score=25.2]; SprT-like zinc ribbon domain [PF17283.4, score=19.3]} {Human: ENSG00000166478, ZNF143, zinc finger protein 143, [Score=96.3, Expect=1e-19]} {Mouse: ENSMUSG00000061079, Zfp143, zinc finger protein 143, [Score=97.8, Expect=3e-20]} {Dmel: FBgn0036522, CG7372, [Score=84.7, Expect=4e-16]} {Celegans: WBGene00021931, Y55F3AM.14, [Score=61.2, Expect=4e-09]} {Smed: dd_Smed_v6_14937_0_1, dd_Smed_v6_14937_0_1, [Score=184, Expect=6e-48]} {RNA1509_3419} {RNA1310_2076.1, RNA1509_3419} {RNA1509_3419, RNA815_7091}
3. MligTC455_20601 737 15.35 Mlig455_005180

Neo: -

Age: -

TMF1 1.666 - - - 0.715 0.951 - Mlig455_005180 {REF} {Length: 10687} {TRANSSPLICED} {Pfam: TATA element modulatory factor 1 TATA binding [PF12325.10, score=75.5]} {Human: ENSG00000144747, TMF1, TATA element modulatory factor 1, [RH, Score=264, Expect=8e-72]} {Mouse: ENSMUSG00000030059, Tmf1, TATA element modulatory factor 1, [RH, Score=263, Expect=1e-71]} {Dmel: FBgn0029912, CG4557, [RH, Score=119, Expect=9e-27]} {Smed: dd_Smed_v6_4248_0_1, dd_Smed_v6_4248_0_1, [RH, Score=251, Expect=8e-69]} {RNA1509_26682, RNA1509_9354} {RNA1310_1796, RNA1509_26682} {RNA1509_26682, RNA815_8516}

Refine r cutoff to:    Show

Berezikov Lab - 2020-2021 © ERIBA