TomoSeq data search

Data search

Results for MligTC455_20601

Cluster

Total UMI counts

Global CPM

Transcripts

Categories

Human homolog

Annotation

MligTC455_20601

737

15.35

Mlig455_005180

Neo: -

Age: -

TMF1

Mlig455_005180 {REF} {Length: 10687} {TRANSSPLICED} {Pfam: TATA element modulatory factor 1 TATA binding [PF12325.10, score=75.5]} {Human: ENSG00000144747, TMF1, TATA element modulatory factor 1, [RH, Score=264, Expect=8e-72]} {Mouse: ENSMUSG00000030059, Tmf1, TATA element modulatory factor 1, [RH, Score=263, Expect=1e-71]} {Dmel: FBgn0029912, CG4557, [RH, Score=119, Expect=9e-27]} {Smed: dd_Smed_v6_4248_0_1, dd_Smed_v6_4248_0_1, [RH, Score=251, Expect=8e-69]} {RNA1509_26682, RNA1509_9354} {RNA1310_1796, RNA1509_26682} {RNA1509_26682, RNA815_8516}

Cumulative graph for MligTC455_20601

Region-enriched expression

Region	logFC	logCPM	Pvalue	FDR	Specificity
RegionR1	-0.772	4.27	0.45998	1.00000
RegionR2	0.318	4.27	0.42281	0.81345
RegionR3	0.177	4.27	0.59396	1.00000
RegionR4	0.781	4.27	0.03248	0.14370
RegionR5	0.194	4.27	0.52468	0.88721
RegionR6	-0.057	4.27	0.87354	1.00000
RegionR7	-0.192	4.27	0.68748	1.00000
RegionR8	-0.45	4.27	0.46519	1.00000

Regeneration-enriched expression

Region	logFC	logCPM	PValue	FDR	Specificity
RegenerationR1	-2.153	4.27	0.31667	1.00000
RegenerationR2	0.151	4.27	0.61540	0.92160
RegenerationR3	0.149	4.27	0.66765	0.93617
RegenerationR4	-0.524	4.27	0.13536	0.55482
RegenerationR5	0.112	4.27	0.72656	0.96168
RegenerationR6	0.528	4.27	0.14423	0.46534
RegenerationBL	0.65	4.27	0.13997	0.44573
RegenerationTP	0.414	4.27	0.41880	0.84317

Genes with expression patterns similar to MligTC455_20601

Nr.	Cluster	Total UMI counts	Global CPM	Transcripts	Categories	Human homolog	Σ Spearman correlations	Int1	Int2	Int3	Reg1	Reg2	Reg3	Annotation
1.	MligTC455_20601	737	15.35	Mlig455_005180	Neo: - Age: -	TMF1	6	1.000	1.000	1.000	1.000	1.000	1.000	Mlig455_005180 {REF} {Length: 10687} {TRANSSPLICED} {Pfam: TATA element modulatory factor 1 TATA binding [PF12325.10, score=75.5]} {Human: ENSG00000144747, TMF1, TATA element modulatory factor 1, [RH, Score=264, Expect=8e-72]} {Mouse: ENSMUSG00000030059, Tmf1, TATA element modulatory factor 1, [RH, Score=263, Expect=1e-71]} {Dmel: FBgn0029912, CG4557, [RH, Score=119, Expect=9e-27]} {Smed: dd_Smed_v6_4248_0_1, dd_Smed_v6_4248_0_1, [RH, Score=251, Expect=8e-69]} {RNA1509_26682, RNA1509_9354} {RNA1310_1796, RNA1509_26682} {RNA1509_26682, RNA815_8516}
2.	MligTC455_20600	682	14.22	Mlig455_005129	Neo: - Age: -	TMF1	5.66	0.988	0.983	0.971	0.974	0.833	0.911	Mlig455_005129 {REF} {Length: 6669} {TRANSSPLICED} {Pfam: TATA element modulatory factor 1 TATA binding [PF12325.10, score=75.7]} {Human: ENSG00000144747, TMF1, TATA element modulatory factor 1, [RH, Score=263, Expect=1e-71]} {Mouse: ENSMUSG00000030059, Tmf1, TATA element modulatory factor 1, [RH, Score=261, Expect=3e-71]} {Dmel: FBgn0029912, CG4557, [RH, Score=122, Expect=9e-28]} {Smed: dd_Smed_v6_4248_0_1, dd_Smed_v6_4248_0_1, [RH, Score=252, Expect=4e-69]} {RNA1509_9354} {RNA1310_1796, RNA1509_9354} {RNA1509_9354, RNA815_8516}
3.	MligTC455_15761	402	8.37	Mlig455_044825	Neo: - Age: -		1.727	0.766	-	-	0.961	-	-	Mlig455_044825 {REF} {Length: 2058} {Pfam: P21-Rho-binding domain [PF00786.30, score=49.7]} {RNA1509_14868} {RNA1310_13787, RNA1509_14868} {RNA1509_14868, RNA815_4921}
4.	MligTC455_48723	618	12.88	Mlig455_022865	Neo: - Age: -	ZNF143	1.666	-	-	-	0.715	0.951	-	Mlig455_022865 {REF} {Length: 6932} {TRANSSPLICED} {Pfam: Zinc finger, C2H2 type [PF00096.28, score=44.0]; C2H2-type zinc finger [PF13894.8, score=40.9]; Zinc-finger double domain [PF13465.8, score=25.3]} {Human: ENSG00000166478, ZNF143, zinc finger protein 143, [Score=95.1, Expect=3e-19]} {Mouse: ENSMUSG00000061079, Zfp143, zinc finger protein 143, [Score=96.7, Expect=7e-20]} {Dmel: FBgn0266450, Kr-h1, Kruppel homolog 1, [Score=87.0, Expect=6e-17]} {Celegans: WBGene00003847, blmp-1, B lymphocyte-induced maturation protein 1 homolog, [Score=64.7, Expect=4e-10]} {Smed: dd_Smed_v6_14937_0_1, dd_Smed_v6_14937_0_1, [Score=176, Expect=4e-45]} {RNA1509_3419} {RNA1310_7805} {RNA815_7091}
5.	MligTC455_43044	1156	24.09	Mlig455_013777	Neo: - Age: -	FZD1	1.662	-	0.708	-	-	0.954	-	Mlig455_013777 {REF} {Length: 4181} {Pfam: Frizzled/Smoothened family membrane region [PF01534.19, score=356.5]; Fz domain [PF01392.24, score=91.4]} {Human: ENSG00000157240, FZD1, frizzled class receptor 1, [Score=398, Expect=9e-130]} {Mouse: ENSMUSG00000044674, Fzd1, frizzled class receptor 1, [Score=392, Expect=6e-128]; ENSMUSG00000050288, Fzd2, frizzled class receptor 2, [Score=373, Expect=3e-121]} {Dmel: FBgn0001085, fz, frizzled, [Score=385, Expect=2e-125]} {Celegans: WBGene00003397, mom-5, [Score=323, Expect=3e-102]} {Smed: dd_Smed_v6_6353_0_1, dd_Smed_v6_6353_0_1, [RH, Score=387, Expect=2e-126]} {RNA1509_47398, RNA1509_57703} {RNA1310_3311, RNA1509_47398} {RNA1509_47398, RNA815_1101.1}
6.	MligTC455_21086	349	7.28	Mlig455_001096	Neo: - Age: Down-Up-Down, logFC(26M/2M)=-0.610	DUSP14	0.958	-	-	-	-	0.958	-	Mlig455_001096 {REF} {Length: 2780} {TRANSSPLICED} {Pfam: Dual specificity phosphatase, catalytic domain [PF00782.22, score=111.7]} {Human: ENSG00000276023, DUSP14, dual specificity phosphatase 14, [Score=115, Expect=8e-31]; ENSG00000275932, DUSP14, dual specificity phosphatase 14, [Score=115, Expect=8e-31]} {Mouse: ENSMUSG00000018648, Dusp14, dual specificity phosphatase 14, [Score=116, Expect=2e-31]} {Dmel: FBgn0243512, puc, puckered, [Score=95.1, Expect=4e-22]} {Celegans: WBGene00007302, C04F12.8, [Score=145, Expect=5e-42]} {Smed: dd_Smed_v6_8557_0_1, dd_Smed_v6_8557_0_1, [Score=136, Expect=6e-38]} {RNA1509_25505} {RNA1310_8130.1} {RNA815_13956}
7.	MligTC455_41549	1912	39.84	Mlig455_018620	Neo: - Age: Down-Up-Down		0.952	-	-	-	0.952	-	-	Mlig455_018620 {REF} {Length: 1355} {RNA1509_11971} {RNA1310_12238} {RNA815_7772}

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