Data search


search
Exact
Search

Results for MligTC455_48750

Cluster Total UMI counts Global CPM Transcripts Categories Human homolog Annotation
MligTC455_48750 3844 80.09 Mlig455_007168

Neo: Int S/G2/M

Age: -

Region-enriched R4: 1.187/0.00002

Regeneration-upregulated BL: 1.016

Regeneration-enriched BL: 1.016

SERP2 Mlig455_007168 {REF} {Length: 789} {TRANSSPLICED} {Pfam: Ribosome associated membrane protein RAMP4 [PF06624.14, score=90.6]} {Human: ENSG00000151778, SERP2, stress associated endoplasmic reticulum protein family member 2, [Score=81.3, Expect=4e-22]} {Mouse: ENSMUSG00000052584, Serp2, stress-associated endoplasmic reticulum protein family member 2, [Score=81.3, Expect=3e-22]} {Dmel: FBgn0047135, CG32276, [RH, Score=92.4, Expect=9e-27]} {Celegans: WBGene00020374, T09A12.5, [Score=81.3, Expect=2e-22]} {Smed: dd_Smed_v6_304_0_1, dd_Smed_v6_304_0_1, [Score=103, Expect=3e-31]} {RNA1509_11428, RNA1509_17290, RNA1509_20419, RNA1509_28870, RNA1509_7506} {RNA1310_25484.2, RNA1509_11428, RNA1509_17290, RNA1509_20419, RNA1509_28870, RNA1509_7506} {RNA1509_11428, RNA1509_17290, RNA1509_20419, RNA1509_28870, RNA1509_7506, RNA815_21542}

Cumulative graph for MligTC455_48750

Region-enriched expression

Region logFC logCPM Pvalue FDR Specificity
RegionR1 0.472 6.45 0.24967 0.89590
RegionR2 -0.55 6.45 0.03221 0.20424
RegionR3 -0.194 6.45 0.37272 0.90668
RegionR4 1.187 6.45 0.00000 0.00002
RegionR5 0.374 6.45 0.06143 0.21683
RegionR6 -0.211 6.45 0.34018 0.92749
RegionR7 -0.367 6.45 0.14944 0.71873
RegionR8 -0.711 6.45 0.02353 0.29868

Regeneration-enriched expression

Region logFC logCPM PValue FDR Specificity
RegenerationR1 -3.578 6.45 0.00001 0.01567
RegenerationR2 0.019 6.45 0.94190 1.00000
RegenerationR3 -0.267 6.45 0.31960 0.74803
RegenerationR4 -0.999 6.45 0.00019 0.01123
RegenerationR5 -0.486 6.45 0.05740 0.38278
RegenerationR6 0.083 6.45 0.75865 0.95612
RegenerationBL 1.016 6.45 0.00004 0.00243 Specific for BL: 1.016
RegenerationTP 0.279 6.45 0.35011 0.79195


Genes with expression patterns similar to MligTC455_48750

Nr. Cluster Total UMI counts Global CPM Transcripts Categories Human homolog Σ Spearman correlations Int1 Int2 Int3 Reg1 Reg2 Reg3 Annotation
1. MligTC455_48750 3844 80.09 Mlig455_007168

Neo: Int S/G2/M

Age: -

Region-enriched R4: 1.187/0.00002

Regeneration-upregulated BL: 1.016

Regeneration-enriched BL: 1.016

SERP2 6 1.000 1.000 1.000 1.000 1.000 1.000 Mlig455_007168 {REF} {Length: 789} {TRANSSPLICED} {Pfam: Ribosome associated membrane protein RAMP4 [PF06624.14, score=90.6]} {Human: ENSG00000151778, SERP2, stress associated endoplasmic reticulum protein family member 2, [Score=81.3, Expect=4e-22]} {Mouse: ENSMUSG00000052584, Serp2, stress-associated endoplasmic reticulum protein family member 2, [Score=81.3, Expect=3e-22]} {Dmel: FBgn0047135, CG32276, [RH, Score=92.4, Expect=9e-27]} {Celegans: WBGene00020374, T09A12.5, [Score=81.3, Expect=2e-22]} {Smed: dd_Smed_v6_304_0_1, dd_Smed_v6_304_0_1, [Score=103, Expect=3e-31]} {RNA1509_11428, RNA1509_17290, RNA1509_20419, RNA1509_28870, RNA1509_7506} {RNA1310_25484.2, RNA1509_11428, RNA1509_17290, RNA1509_20419, RNA1509_28870, RNA1509_7506} {RNA1509_11428, RNA1509_17290, RNA1509_20419, RNA1509_28870, RNA1509_7506, RNA815_21542}
2. MligTC455_44168 4379 91.23 Mlig455_059898

Neo: Int S/G2/M

Age: logFC(26M/2M)=-0.461

Regeneration-upregulated BL: 1.022

Regeneration-enriched BL: 1.022

SRSF7 2.523 - - - 0.954 0.832 0.737 Mlig455_059898 {REF} {Length: 1013} {TRANSSPLICED} {Pfam: RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) [PF00076.24, score=61.7]; RNA recognition motif [PF16367.7, score=24.0]; Zinc knuckle [PF00098.25, score=22.0]; RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) [PF13893.8, score=19.5]; Zinc knuckle [PF13917.8, score=19.5]} {Human: ENSG00000115875, SRSF7, serine and arginine rich splicing factor 7, [RH, Score=147, Expect=2e-45]} {Mouse: ENSMUSG00000024097, Srsf7, serine/arginine-rich splicing factor 7, [RH, Score=147, Expect=1e-45]} {Dmel: FBgn0028554, x16, x16 splicing factor, [RH, Score=106, Expect=3e-28]} {Celegans: WBGene00013293, Y57G11A.5, [Score=76.6, Expect=2e-18]} {Smed: dd_Smed_v6_2424_0_1, dd_Smed_v6_2424_0_1, [RH, Score=129, Expect=1e-38]} {RNA1509_11562, RNA1509_20255, RNA1509_37237} {RNA1310_34684.1, RNA1509_11562, RNA1509_20255, RNA1509_37237} {RNA1509_11562, RNA1509_20255, RNA1509_37237, RNA815_20639}
3. MligTC455_18473 658 13.71 Mlig455_065950

Neo: -

Age: -

1.842 - - - 0.963 - 0.879 Mlig455_065950 {REF} {Length: 1966} {TRANSSPLICED} {RNA1509_24487, RNA1509_46170} {RNA1310_16089.1, RNA1509_24487, RNA1509_46170} {RNA1509_24487, RNA1509_46170, RNA815_13960}
4. MligTC455_18472 662 13.79 Mlig455_065928

Neo: -

Age: -

1.841 - - - 0.963 - 0.878 Mlig455_065928 {REF} {Length: 2444} {RNA1509_24487} {RNA1310_16089.1} {RNA815_13960}
5. MligTC455_27892 1176 24.51 Mlig455_059337

Neo: -

Age: logFC(26M/2M)=-0.371

Regeneration-upregulated BL: 1.618

Regeneration-enriched BL: 1.618

1.778 - - - 0.823 0.955 - Mlig455_059337 {REF} {Length: 1631} {RNA1509_9554} {RNA1310_29242} {RNA815_13125}
6. MligTC455_20376 3581 74.61 Mlig455_002644

Neo: -

Age: logFC(26M/2M)=-1.840

Regeneration-depleted R3: -1.933
Regeneration-depleted TP: -1.570
Regeneration-depleted R4: -1.525
Regeneration-depleted R2: -1.494
Regeneration-depleted R6: -1.199

SLC39A4 1.743 - - - 0.950 0.793 - Mlig455_002644 {REF} {Length: 2071} {Pfam: ZIP Zinc transporter [PF02535.24, score=146.7]} {Human: ENSG00000285243, SLC39A4, solute carrier family 39 member 4, [RH, Score=167, Expect=9e-45]; ENSG00000147804, SLC39A4, solute carrier family 39 member 4, [RH, Score=166, Expect=2e-44]} {Mouse: ENSMUSG00000063354, Slc39a4, solute carrier family 39 (zinc transporter), member 4, [RH, Score=164, Expect=9e-44]} {Dmel: FBgn0036461, Zip71B, Zinc/iron regulated transporter-related protein 71B, [Score=143, Expect=8e-37]} {Celegans: WBGene00021936, zipt-20, Zrt (ZRT), Irt-(IRT-) like Protein Transporter, [Score=89.0, Expect=2e-19]} {Smed: dd_Smed_v6_1731_0_2, dd_Smed_v6_1731_0_2, [Score=142, Expect=3e-37]} {RNA1509_3845} {RNA1310_12268.1} {RNA815_4329.1}
7. MligTC455_43670 5487 114.3 Mlig455_065841

Neo: -

Age: Down-Up-Up

ATP1B4 1.735 - - - 0.952 0.783 - Mlig455_065841 {REF} {Length: 1672} {TRANSSPLICED} {Pfam: Sodium / potassium ATPase beta chain [PF00287.20, score=99.6]} {Human: ENSG00000101892, ATP1B4, ATPase Na+/K+ transporting family member beta 4, [Score=57.4, Expect=1e-09]} {Mouse: ENSMUSG00000016327, Atp1b4, ATPase, (Na+)/K+ transporting, beta 4 polypeptide, [Score=55.8, Expect=3e-09]} {Dmel: FBgn0015777, nrv2, nervana 2, [Score=96.3, Expect=5e-24]} {Celegans: WBGene00007646, nkb-1, Sodium/potassium-transporting ATPase subunit beta-1, [Score=85.9, Expect=2e-20]} {Smed: dd_Smed_v6_2230_0_4, dd_Smed_v6_2230_0_4, [Score=120, Expect=2e-33]} {RNA1509_51210} {RNA1310_399.1, RNA1509_51210} {RNA1509_51210, RNA815_7803}
8. MligTC455_35822 2653 55.28 Mlig455_036751

Neo: -

Age: -

MYL9 1.701 - - - 0.959 0.742 - Mlig455_036751 {REF} {Length: 1513} {TRANSSPLICED} {Pfam: EF hand [PF00036.34, score=54.0]; EF-hand domain [PF13405.8, score=50.7]; EF-hand domain pair [PF13499.8, score=49.8]; EF hand [PF13202.8, score=34.0]; EF-hand domain pair [PF13833.8, score=32.8]; EF-hand domain [PF08976.13, score=22.5]} {Human: ENSG00000101335, MYL9, myosin light chain 9, [RH, Score=213, Expect=4e-71]; ENSG00000118680, MYL12B, myosin light chain 12B, [RH, Score=213, Expect=4e-71]; ENSG00000101608, MYL12A, myosin light chain 12A, [RH, Score=213, Expect=9e-71]} {Mouse: ENSMUSG00000117098, AC154187.2, novel protein, [RH, Score=213, Expect=2e-71]; ENSMUSG00000034868, Myl12b, myosin, light chain 12B, regulatory, [RH, Score=213, Expect=3e-71]; ENSMUSG00000024048, Myl12a, myosin, light chain 12A, regulatory, non-sarcomeric, [RH, Score=213, Expect=2e-71]; ENSMUSG00000067818, Myl9, myosin, light polypeptide 9, regulatory, [RH, Score=212, Expect=1e-70]} {Dmel: FBgn0003514, sqh, spaghetti squash, [RH, Score=218, Expect=2e-73]} {Celegans: WBGene00003372, mlc-4, Myosin regulatory light chain, [RH, Score=217, Expect=4e-73]} {Smed: dd_Smed_v6_383_0_1, dd_Smed_v6_383_0_1, [RH, Score=254, Expect=1e-87]} {RNA1509_1375, RNA1509_16769, RNA1509_2323, RNA1509_2418, RNA1509_32870, RNA1509_44676, RNA1509_45916, RNA1509_50731, RNA1509_51470, RNA1509_6738, RNA1509_7577, RNA1509_9536} {RNA1310_20902.1, RNA1509_1375, RNA1509_16769, RNA1509_2323, RNA1509_2418, RNA1509_32870, RNA1509_44676, RNA1509_45916, RNA1509_50731, RNA1509_51470, RNA1509_6738, RNA1509_7577, RNA1509_9536} {RNA1509_1375, RNA1509_16769, RNA1509_2323, RNA1509_2418, RNA1509_32870, RNA1509_44676, RNA1509_45916, RNA1509_50731, RNA1509_51470, RNA1509_6738, RNA1509_7577, RNA1509_9536, RNA815_8312.1}
9. MligTC455_49026 215 4.48 Mlig455_037206

Neo: -

Age: Down-Up-Down

HSPG2 1.686 - - - 0.956 0.730 - Mlig455_037206 {REF} {Length: 4399} {Pfam: Immunoglobulin domain [PF13927.8, score=184.9]; Immunoglobulin domain [PF13895.8, score=134.5]; Immunoglobulin I-set domain [PF07679.18, score=112.6]; Immunoglobulin domain [PF00047.27, score=95.1]; Immunoglobulin V-set domain [PF07686.19, score=61.1]; CD80-like C2-set immunoglobulin domain [PF08205.14, score=42.0]; Fibronectin type III domain [PF00041.23, score=37.5]; Immunoglobulin domain [PF18452.3, score=35.0]; C17orf99 Ig domain [PF17736.3, score=23.3]} {Human: ENSG00000142798, HSPG2, heparan sulfate proteoglycan 2, [Score=117, Expect=8e-26]} {Mouse: ENSMUSG00000055632, Hmcn2, hemicentin 2, [Score=132, Expect=2e-30]} {Dmel: FBgn0000547, ed, echinoid, [Score=217, Expect=3e-57]} {Celegans: WBGene00018215, igcm-1, ImmunoGlobulin-like Cell adhesion Molecule family, [Score=138, Expect=6e-33]} {Smed: dd_Smed_v6_13903_0_1, dd_Smed_v6_13903_0_1, [Score=162, Expect=2e-40]} {RNA1509_31910} {RNA1310_43699} {RNA815_44505}
10. MligTC455_38192 2040 42.5 Mlig455_006887

Neo: -

Age: -

0.967 - - - 0.967 - - Mlig455_006887 {REF} {Length: 2301} {RNA1509_11591, RNA1509_28445, RNA1509_30934, RNA1509_33723, RNA1509_4251, RNA1509_54620} {RNA1310_13388.1, RNA1509_11591, RNA1509_28445, RNA1509_30934, RNA1509_33723, RNA1509_4251, RNA1509_54620} {RNA1509_11591, RNA1509_28445, RNA1509_30934, RNA1509_33723, RNA1509_4251, RNA1509_54620, RNA815_6463.1}
11. MligTC455_23990 1133 23.6 Mlig455_048622, Mlig455_048737

Neo: -

Age: -

Region-enriched R4: 1.532/0.00129

KDM6A 0.963 - - - 0.963 - -

Mlig455_048622 {REF} {Length: 9649} {Pfam: JmjC domain, hydroxylase [PF02373.24, score=103.9]; Tetratricopeptide repeat [PF00515.30, score=94.3]; Tetratricopeptide repeat [PF13424.8, score=52.8]; Tetratricopeptide repeat [PF07719.19, score=51.2]; Tetratricopeptide repeat [PF13176.8, score=44.8]; Tetratricopeptide repeat [PF13181.8, score=44.5]; Tetratricopeptide repeat [PF13432.8, score=39.6]; Tetratricopeptide repeat [PF14559.8, score=37.8]; Tetratricopeptide repeat [PF13428.8, score=33.6]; Tetratricopeptide repeat [PF13174.8, score=32.5]; TPR repeat [PF13414.8, score=32.1]; Tetratricopeptide repeat [PF13431.8, score=29.1]; Tetratricopeptide repeat [PF13371.8, score=28.9]; Anaphase-promoting complex, cyclosome, subunit 3 [PF12895.9, score=19.5]} {Human: ENSG00000147050, KDM6A, lysine demethylase 6A, [RH, Score=591, Expect=0.0]; ENSG00000183878, UTY, ubiquitously transcribed tetratricopeptide repeat containing, Y-linked, [RH, Score=580, Expect=0.0]; ENSG00000132510, KDM6B, lysine demethylase 6B, [RH, Score=562, Expect=7e-177]} {Mouse: ENSMUSG00000037369, Kdm6a, lysine (K)-specific demethylase 6A, [RH, Score=592, Expect=0.0]} {Dmel: FBgn0260749, Utx, Utx histone demethylase, [RH, Score=851, Expect=0.0]} {Celegans: WBGene00017046, utx-1, UTX (Ubiquitously transcribed TPR on X) homolog, [RH, Score=426, Expect=8e-131]} {Smed: dd_Smed_v6_5837_0_1, dd_Smed_v6_5837_0_1, [RH, Score=586, Expect=0.0]} {RNA1509_3704} {RNA1310_2134} {RNA815_1846}

Mlig455_048737 {REF} {Length: 5326} {Pfam: JmjC domain, hydroxylase [PF02373.24, score=103.9]; Tetratricopeptide repeat [PF00515.30, score=94.3]; Tetratricopeptide repeat [PF13424.8, score=52.9]; Tetratricopeptide repeat [PF07719.19, score=51.2]; Tetratricopeptide repeat [PF13176.8, score=44.8]; Tetratricopeptide repeat [PF13181.8, score=44.5]; Tetratricopeptide repeat [PF13432.8, score=42.4]; Tetratricopeptide repeat [PF14559.8, score=37.8]; Tetratricopeptide repeat [PF13428.8, score=33.6]; Tetratricopeptide repeat [PF13174.8, score=32.6]; TPR repeat [PF13414.8, score=32.1]; Tetratricopeptide repeat [PF13431.8, score=29.1]; Tetratricopeptide repeat [PF13371.8, score=28.9]; Anaphase-promoting complex, cyclosome, subunit 3 [PF12895.9, score=19.5]} {Human: ENSG00000147050, KDM6A, lysine demethylase 6A, [RH, Score=592, Expect=0.0]; ENSG00000183878, UTY, ubiquitously transcribed tetratricopeptide repeat containing, Y-linked, [RH, Score=581, Expect=0.0]; ENSG00000132510, KDM6B, lysine demethylase 6B, [RH, Score=563, Expect=2e-177]} {Mouse: ENSMUSG00000037369, Kdm6a, lysine (K)-specific demethylase 6A, [RH, Score=594, Expect=0.0]} {Dmel: FBgn0260749, Utx, Utx histone demethylase, [RH, Score=856, Expect=0.0]} {Celegans: WBGene00017046, utx-1, UTX (Ubiquitously transcribed TPR on X) homolog, [RH, Score=425, Expect=1e-130]} {Smed: dd_Smed_v6_5837_0_1, dd_Smed_v6_5837_0_1, [RH, Score=581, Expect=0.0]} {RNA1509_3704} {RNA1310_2134} {RNA815_1846}
12. MligTC455_28615 2862 59.62 Mlig455_003156, Mlig455_003355

Neo: -

Age: logFC(26M/2M)=0.173

Regeneration-upregulated BL: 1.575

Regeneration-enriched BL: 1.575

TOP2A 0.959 - - - 0.959 - -

Mlig455_003156 {REF} {Length: 5456} {TRANSSPLICED} {Pfam: DNA gyrase/topoisomerase IV, subunit A [PF00521.22, score=419.8]; C-terminal associated domain of TOPRIM [PF16898.7, score=159.7]} {Human: ENSG00000131747, TOP2A, DNA topoisomerase II alpha, [Score=917, Expect=0.0]; ENSG00000077097, TOP2B, DNA topoisomerase II beta, [Score=899, Expect=0.0]} {Mouse: ENSMUSG00000020914, Top2a, topoisomerase (DNA) II alpha, [Score=931, Expect=0.0]; ENSMUSG00000017485, Top2b, topoisomerase (DNA) II beta, [Score=901, Expect=0.0]} {Dmel: FBgn0284220, Top2, Topoisomerase 2, [Score=813, Expect=0.0]} {Celegans: WBGene00010785, top-2, Probable DNA topoisomerase 2, [Score=834, Expect=0.0]} {Smed: dd_Smed_v6_1626_0_2, dd_Smed_v6_1626_0_2, [Score=855, Expect=0.0]} {RNA1509_1320} {RNA1310_913.1, RNA1509_1320} {RNA1509_1320, RNA815_273.1}

Mlig455_003355 {REF} {Length: 5877} {Pfam: DNA gyrase/topoisomerase IV, subunit A [PF00521.22, score=417.1]; C-terminal associated domain of TOPRIM [PF16898.7, score=159.1]; DNA gyrase B [PF00204.27, score=85.8]; Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase [PF02518.28, score=55.8]; Toprim domain [PF01751.24, score=33.6]} {Human: ENSG00000131747, TOP2A, DNA topoisomerase II alpha, [RH, Score=1559, Expect=0.0]; ENSG00000077097, TOP2B, DNA topoisomerase II beta, [RH, Score=1557, Expect=0.0]} {Mouse: ENSMUSG00000020914, Top2a, topoisomerase (DNA) II alpha, [RH, Score=1576, Expect=0.0]; ENSMUSG00000017485, Top2b, topoisomerase (DNA) II beta, [RH, Score=1564, Expect=0.0]} {Dmel: FBgn0284220, Top2, Topoisomerase 2, [RH, Score=1434, Expect=0.0]} {Celegans: WBGene00010785, top-2, Probable DNA topoisomerase 2, [RH, Score=1422, Expect=0.0]} {Smed: dd_Smed_v6_1626_0_2, dd_Smed_v6_1626_0_2, [RH, Score=1434, Expect=0.0]} {RNA1509_1320} {RNA1310_913.1} {RNA815_273.1}
13. MligTC455_24768 192 4.01 Mlig455_067990

Neo: -

Age: -

ZNF521 0.957 - - - 0.957 - - Mlig455_067990 {REF} {Length: 3203} {TRANSSPLICED} {Pfam: C2H2-type zinc finger [PF13894.8, score=31.0]; Zinc finger, C2H2 type [PF00096.28, score=25.2]} {Human: ENSG00000198795, ZNF521, zinc finger protein 521, [Score=49.7, Expect=1e-05]; ENSG00000100105, PATZ1, POZ/BTB and AT hook containing zinc finger 1, [Score=49.7, Expect=1e-05]} {Mouse: ENSMUSG00000024420, Zfp521, zinc finger protein 521, [Score=49.3, Expect=1e-05]; ENSMUSG00000020453, Patz1, POZ (BTB) and AT hook containing zinc finger 1, [Score=49.3, Expect=8e-06]} {RNA1509_16225, RNA1509_55562} {RNA1310_1264.1, RNA1509_55562} {RNA1509_55562, RNA815_3978.1}
14. MligTC455_46356 690 14.38 Mlig455_013999

Neo: Irradiation

Age: -

0.955 - - - 0.955 - - Mlig455_013999 {REF} {Length: 3399} {TRANSSPLICED} {RNA1509_17744} {RNA1310_20079, RNA1509_17744} {RNA1509_17744, RNA815_21139.2}
15. MligTC455_39347 447 9.31 Mlig455_064697

Neo: -

Age: -

WDR47 0.951 - - - 0.951 - - Mlig455_064697 {REF} {Length: 6013} {TRANSSPLICED} {Pfam: WD domain, G-beta repeat [PF00400.34, score=73.3]; Anaphase-promoting complex subunit 4 WD40 domain [PF12894.9, score=37.2]} {Human: ENSG00000085433, WDR47, WD repeat domain 47, [RH, Score=323, Expect=6e-96]} {Mouse: ENSMUSG00000040389, Wdr47, WD repeat domain 47, [RH, Score=325, Expect=8e-97]} {Dmel: FBgn0034931, CG2812, [RH, Score=283, Expect=3e-87]} {Celegans: WBGene00019434, nmtn-1, NeMiTiN (Neuronal enriched MAP interacting protein) homolog, [RH, Score=272, Expect=5e-78]} {Smed: dd_Smed_v6_3366_0_2, dd_Smed_v6_3366_0_2, [Score=613, Expect=0.0]} {RNA1509_13686, RNA1509_20380, RNA1509_53421} {RNA1310_4648, RNA1509_13686, RNA1509_20380, RNA1509_53421} {RNA1509_13686, RNA1509_20380, RNA1509_53421, RNA815_13490}

Refine r cutoff to:    Show

Berezikov Lab - 2020-2021 © ERIBA