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Results for MligTC455_48768

Cluster Total UMI counts Global CPM Transcripts Categories Human homolog Annotation
MligTC455_48768 182 3.78 Mlig455_028541

Neo: -

Age: Up-Down-Down

 SEC24A Mlig455_028541 {REF} {Length: 4842} {TRANSSPLICED} {Pfam: Sec23/Sec24 trunk domain [PF04811.17, score=117.5]; Sec23/Sec24 helical domain [PF04815.17, score=54.8]; Sec23/Sec24 beta-sandwich domain [PF08033.14, score=53.6]; Sec23/Sec24 zinc finger [PF04810.17, score=49.8]} {Human: ENSG00000113615, SEC24A, SEC24 homolog A, COPII coat complex component, [Score=556, Expect=1e-180]; ENSG00000138802, SEC24B, SEC24 homolog B, COPII coat complex component, [Score=549, Expect=3e-176]} {Mouse: ENSMUSG00000036391, Sec24a, Sec24 related gene family, member A (S. cerevisiae), [Score=549, Expect=2e-178]; ENSMUSG00000001052, Sec24b, Sec24 related gene family, member B (S. cerevisiae), [Score=530, Expect=2e-169]} {Dmel: FBgn0033460, Sec24AB, Secretory 24AB, [Score=503, Expect=2e-160]} {Celegans: WBGene00004756, sec-24.2, Yeast SEC homolog, [Score=494, Expect=1e-158]} {Smed: dd_Smed_v6_3760_0_1, dd_Smed_v6_3760_0_1, [Score=489, Expect=8e-158]} {RNA1509_35779} {RNA1310_9489.1} {RNA815_10954}

Cumulative graph for MligTC455_48768

Region-enriched expression

Region logFC logCPM Pvalue FDR Specificity
RegionR1 1.021 2.631 0.56015 1.00000
RegionR2 -0.264 2.631 0.69069 1.00000
RegionR3 -0.135 2.631 0.77769 1.00000
RegionR4 0.872 2.631 0.18372 0.45537
RegionR5 0.284 2.631 0.49414 0.85763
RegionR6 -0.415 2.631 0.43654 0.99755
RegionR7 -0.952 2.631 0.23743 0.86144
RegionR8 -0.411 2.631 0.63758 1.00000

Regeneration-enriched expression

Region logFC logCPM PValue FDR Specificity
RegenerationR1 -5.069 2.631 0.36365 1.00000
RegenerationR2 0.163 2.631 0.74822 0.97284
RegenerationR3 0.385 2.631 0.48623 0.85333
RegenerationR4 -0.069 2.631 0.90332 1.00000
RegenerationR5 0.17 2.631 0.70623 0.95401
RegenerationR6 -0.509 2.631 0.46426 0.78059
RegenerationBL -0.543 2.631 0.64300 0.98157
RegenerationTP -0.678 2.631 0.50372 0.90265


Genes with expression patterns similar to MligTC455_48768

Nr. Cluster Total UMI counts Global CPM Transcripts Categories Human homolog Σ Spearman correlations Int1 Int2 Int3 Reg1 Reg2 Reg3 Annotation
1. MligTC455_48768 182 3.78 Mlig455_028541

Neo: -

Age: Up-Down-Down

 SEC24A 6 1.000 1.000 1.000 1.000 1.000 1.000 Mlig455_028541 {REF} {Length: 4842} {TRANSSPLICED} {Pfam: Sec23/Sec24 trunk domain [PF04811.17, score=117.5]; Sec23/Sec24 helical domain [PF04815.17, score=54.8]; Sec23/Sec24 beta-sandwich domain [PF08033.14, score=53.6]; Sec23/Sec24 zinc finger [PF04810.17, score=49.8]} {Human: ENSG00000113615, SEC24A, SEC24 homolog A, COPII coat complex component, [Score=556, Expect=1e-180]; ENSG00000138802, SEC24B, SEC24 homolog B, COPII coat complex component, [Score=549, Expect=3e-176]} {Mouse: ENSMUSG00000036391, Sec24a, Sec24 related gene family, member A (S. cerevisiae), [Score=549, Expect=2e-178]; ENSMUSG00000001052, Sec24b, Sec24 related gene family, member B (S. cerevisiae), [Score=530, Expect=2e-169]} {Dmel: FBgn0033460, Sec24AB, Secretory 24AB, [Score=503, Expect=2e-160]} {Celegans: WBGene00004756, sec-24.2, Yeast SEC homolog, [Score=494, Expect=1e-158]} {Smed: dd_Smed_v6_3760_0_1, dd_Smed_v6_3760_0_1, [Score=489, Expect=8e-158]} {RNA1509_35779} {RNA1310_9489.1} {RNA815_10954}
2. MligTC455_48769 190 3.96 Mlig455_064731

Neo: -

Age: -

 SEC24A 5.914 0.980 0.999 0.986 0.986 0.989 0.974 Mlig455_064731 {REF} {Length: 3017} {Pfam: Sec23/Sec24 trunk domain [PF04811.17, score=118.2]; Sec23/Sec24 beta-sandwich domain [PF08033.14, score=54.8]; Sec23/Sec24 helical domain [PF04815.17, score=48.6]} {Human: ENSG00000113615, SEC24A, SEC24 homolog A, COPII coat complex component, [Score=416, Expect=1e-132]; ENSG00000138802, SEC24B, SEC24 homolog B, COPII coat complex component, [Score=407, Expect=3e-128]} {Mouse: ENSMUSG00000036391, Sec24a, Sec24 related gene family, member A (S. cerevisiae), [Score=408, Expect=5e-130]} {Dmel: FBgn0033460, Sec24AB, Secretory 24AB, [Score=363, Expect=1e-112]} {Celegans: WBGene00004756, sec-24.2, Yeast SEC homolog, [Score=374, Expect=5e-118]} {Smed: dd_Smed_v6_3760_0_1, dd_Smed_v6_3760_0_1, [Score=377, Expect=5e-120]} {RNA1509_35779} {RNA1310_18341} {RNA815_10954}
3. MligTC455_33195 836 17.42 Mlig455_000057, Mlig455_063727

Neo: -

Age: logFC(26M/2M)=0.406

 FIP1L1 0.963 - - - - - 0.963

Mlig455_000057 {REF} {Length: 2122} {TRANSSPLICED} {Pfam: Fip1 motif [PF05182.15, score=71.4]} {Human: ENSG00000145216, FIP1L1, factor interacting with PAPOLA and CPSF1, [RH, Score=94.4, Expect=7e-20]} {Mouse: ENSMUSG00000029227, Fip1l1, FIP1 like 1 (S. cerevisiae), [RH, Score=92.4, Expect=2e-19]} {Dmel: FBgn0037255, Fip1, Factor interacting with poly(A) polymerase 1, [RH, Score=90.9, Expect=8e-19]} {Celegans: WBGene00017988, fipp-1, Factor Interacting with Poly(A) Polymerase, [RH, Score=84.0, Expect=7e-17]} {Smed: dd_Smed_v6_2560_0_1, dd_Smed_v6_2560_0_1, [RH, Score=114, Expect=4e-27]} {RNA1509_14985, RNA1509_48324} {RNA1310_12515, RNA1509_48324} {RNA1509_48324, RNA815_32908}

Mlig455_063727 {REF} {Length: 3480} {TRANSSPLICED} {Pfam: Fip1 motif [PF05182.15, score=72.1]} {Human: ENSG00000145216, FIP1L1, factor interacting with PAPOLA and CPSF1, [RH, Score=88.6, Expect=5e-18]} {Mouse: ENSMUSG00000029227, Fip1l1, FIP1 like 1 (S. cerevisiae), [RH, Score=89.4, Expect=3e-18]} {Dmel: FBgn0037255, Fip1, Factor interacting with poly(A) polymerase 1, [RH, Score=89.7, Expect=2e-18]} {Celegans: WBGene00017988, fipp-1, Factor Interacting with Poly(A) Polymerase, [RH, Score=86.7, Expect=1e-17]} {Smed: dd_Smed_v6_2560_0_1, dd_Smed_v6_2560_0_1, [RH, Score=111, Expect=4e-26]} {RNA1509_14985} {RNA1310_12515, RNA1509_14985} {RNA1509_14985, RNA815_32908}
4. MligTC455_30915 310 6.46 Mlig455_023477

Neo: -

Age: Up-Up-Down, logFC(26M/2M)=0.580

 NUP160 0.957 - - - - - 0.957 Mlig455_023477 {REF} {Length: 6212} {Human: ENSG00000285358, NUP160, nucleoporin 160, [Score=61.2, Expect=9e-09]; ENSG00000030066, NUP160, nucleoporin 160, [Score=61.2, Expect=9e-09]} {Mouse: ENSMUSG00000051329, Nup160, nucleoporin 160, [Score=57.0, Expect=1e-07]} {RNA1509_5873} {RNA1310_964} {RNA815_12960}
5. MligTC455_37707 171 3.57 Mlig455_044283

Neo: -

Age: Down-Down-Up

 0.955 - - - - - 0.955 Mlig455_044283 {REF} {Length: 1689} {NoTransDecoderORF} {RNA1310_12774.2} {RNA815_37521}
6. MligTC455_46813 452 9.42 Mlig455_030644, Mlig455_030997

Neo: Int S/G2/M

Age: -

 RNF113A 0.953 - - 0.953 - - -

Mlig455_030644 {REF} {Length: 2049} {Pfam: Zinc finger C-x8-C-x5-C-x3-H type (and similar) [PF00642.26, score=39.8]; Zinc finger domain [PF18345.3, score=30.1]; RNA-binding, Nab2-type zinc finger [PF14608.8, score=23.6]; CCCH-type zinc finger [PF18044.3, score=23.2]; RING-type zinc-finger [PF13445.8, score=18.9]} {Human: ENSG00000125352, RNF113A, ring finger protein 113A, [Score=203, Expect=2e-62]} {Mouse: ENSMUSG00000098134, Rnf113a2, ring finger protein 113A2, [Score=201, Expect=5e-62]; ENSMUSG00000036537, Rnf113a1, ring finger protein 113A1, [Score=201, Expect=4e-62]} {Dmel: FBgn0038772, mdlc, midlife crisis, [Score=188, Expect=7e-57]} {Celegans: WBGene00010476, rnf-113, RING finger protein 113 homolog, [Score=177, Expect=2e-52]} {Smed: dd_Smed_v6_7536_0_1, dd_Smed_v6_7536_0_1, [Score=151, Expect=2e-43]} {RNA1509_30203} {RNA1310_32557.1} {RNA815_12935}

Mlig455_030997 {REF} {Length: 3540} {Pfam: Zinc finger C-x8-C-x5-C-x3-H type (and similar) [PF00642.26, score=40.2]; Zinc finger, C3HC4 type (RING finger) [PF13920.8, score=35.7]; Zinc finger, C3HC4 type (RING finger) [PF13923.8, score=33.1]; zinc-RING finger domain [PF14634.8, score=30.7]; Zinc finger domain [PF18345.3, score=30.3]; RING-type zinc-finger [PF13445.8, score=29.7]; Ring finger domain [PF13639.8, score=25.6]; Zinc finger, C3HC4 type (RING finger) [PF00097.27, score=25.0]; zinc finger of C3HC4-type, RING [PF15227.8, score=23.5]; RNA-binding, Nab2-type zinc finger [PF14608.8, score=22.5]; CCCH-type zinc finger [PF18044.3, score=22.5]} {Human: ENSG00000125352, RNF113A, ring finger protein 113A, [RH, Score=228, Expect=2e-72]; ENSG00000139797, RNF113B, ring finger protein 113B, [RH, Score=217, Expect=1e-68]} {Mouse: ENSMUSG00000036537, Rnf113a1, ring finger protein 113A1, [RH, Score=229, Expect=4e-73]; ENSMUSG00000098134, Rnf113a2, ring finger protein 113A2, [RH, Score=226, Expect=3e-72]} {Dmel: FBgn0038772, mdlc, midlife crisis, [RH, Score=212, Expect=2e-66]} {Celegans: WBGene00010476, rnf-113, RING finger protein 113 homolog, [RH, Score=197, Expect=1e-60]} {Smed: dd_Smed_v6_7536_0_1, dd_Smed_v6_7536_0_1, [RH, Score=172, Expect=5e-52]} {RNA1509_30203} {RNA1310_32557.1, RNA1509_30203} {RNA1509_30203, RNA815_12935}

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