TomoSeq data search

Data search

Results for MligTC455_48774

Cluster

Total UMI counts

Global CPM

Transcripts

Categories

Human homolog

Annotation

MligTC455_48774

173

3.60

Mlig455_004326

Neo: -

Age: Down-Up-Down

TCEA2

Mlig455_004326 {REF} {Length: 2346} {Pfam: Transcription factor S-II (TFIIS), central domain [PF07500.16, score=92.8]; Transcription factor S-II (TFIIS) [PF01096.20, score=46.7]; TFIIS helical bundle-like domain [PF08711.13, score=28.2]} {Human: ENSG00000171703, TCEA2, transcription elongation factor A2, [Score=160, Expect=2e-44]} {Mouse: ENSMUSG00000059540, Tcea2, transcription elongation factor A (SII), 2, [Score=164, Expect=3e-46]} {Dmel: FBgn0010422, TfIIS, RNA polymerase II elongation factor, [Score=153, Expect=3e-42]} {Celegans: WBGene00012000, T24H10.1, Putative transcription elongation factor S-II, [Score=131, Expect=3e-34]} {Smed: dd_Smed_v6_3176_0_1, dd_Smed_v6_3176_0_1, [Score=134, Expect=2e-35]} {RNA1509_20592, RNA1509_42730, RNA1509_44608} {RNA1310_16346.1, RNA1509_20592, RNA1509_42730, RNA1509_44608} {RNA1509_20592, RNA1509_42730, RNA1509_44608, RNA815_39485}

Cumulative graph for MligTC455_48774

Region-enriched expression

Region	logFC	logCPM	Pvalue	FDR	Specificity
RegionR1	-7.293	2.634	0.04478	0.50803
RegionR2	2.27	2.634	0.01540	0.13104
RegionR3	0.865	2.634	0.35834	0.89375
RegionR4	0.398	2.634	0.67078	0.96740
RegionR5	1.037	2.634	0.21570	0.51498
RegionR6	1.48	2.634	0.07641	0.51304
RegionR7	1.497	2.634	0.14863	0.71736
RegionR8	-0.254	2.634	0.92482	1.00000

Regeneration-enriched expression

Region	logFC	logCPM	PValue	FDR	Specificity
RegenerationR1	2.106	2.634	1.00000	1.00000
RegenerationR2	-0.552	2.634	0.36768	0.79404
RegenerationR3	0.988	2.634	0.12624	0.54736
RegenerationR4	-0.293	2.634	0.66042	0.93823
RegenerationR5	-0.036	2.634	0.95241	1.00000
RegenerationR6	-0.548	2.634	0.44367	0.76649
RegenerationBL	0.926	2.634	0.30467	0.66859
RegenerationTP	1.561	2.634	0.10139	0.49467

Genes with expression patterns similar to MligTC455_48774

Nr.	Cluster	Total UMI counts	Global CPM	Transcripts	Categories	Human homolog	Σ Spearman correlations	Int1	Int2	Int3	Reg1	Reg2	Reg3	Annotation
1.	MligTC455_48774	173	3.6	Mlig455_004326	Neo: - Age: Down-Up-Down	TCEA2	6	1.000	1.000	1.000	1.000	1.000	1.000	Mlig455_004326 {REF} {Length: 2346} {Pfam: Transcription factor S-II (TFIIS), central domain [PF07500.16, score=92.8]; Transcription factor S-II (TFIIS) [PF01096.20, score=46.7]; TFIIS helical bundle-like domain [PF08711.13, score=28.2]} {Human: ENSG00000171703, TCEA2, transcription elongation factor A2, [Score=160, Expect=2e-44]} {Mouse: ENSMUSG00000059540, Tcea2, transcription elongation factor A (SII), 2, [Score=164, Expect=3e-46]} {Dmel: FBgn0010422, TfIIS, RNA polymerase II elongation factor, [Score=153, Expect=3e-42]} {Celegans: WBGene00012000, T24H10.1, Putative transcription elongation factor S-II, [Score=131, Expect=3e-34]} {Smed: dd_Smed_v6_3176_0_1, dd_Smed_v6_3176_0_1, [Score=134, Expect=2e-35]} {RNA1509_20592, RNA1509_42730, RNA1509_44608} {RNA1310_16346.1, RNA1509_20592, RNA1509_42730, RNA1509_44608} {RNA1509_20592, RNA1509_42730, RNA1509_44608, RNA815_39485}
2.	MligTC455_47507	202	4.2	Mlig455_015950, Mlig455_059717	Neo: - Age: - Region-enriched R4: 2.654/0.01994		0.971	-	-	0.971	-	-	-	Mlig455_015950 {REF} {Length: 1452} {Pfam: Thymosin beta-4 family [PF01290.22, score=20.4]} {RNA1509_27585, RNA1509_48356} {RNA1310_37960, RNA1509_48356} {RNA1509_48356, RNA815_19942} Mlig455_059717 {REF} {Length: 1394} {Pfam: Thymosin beta-4 family [PF01290.22, score=20.4]} {RNA1509_27585} {RNA1310_37960} {RNA815_19942}
3.	MligTC455_50204	323	6.73	Mlig455_059228	Neo: Int S/G2/M Age: logFC(26M/2M)=0.366	SCFD2	0.971	-	-	0.971	-	-	-	Mlig455_059228 {REF} {Length: 2604} {TRANSSPLICED} {Pfam: Sec1 family [PF00995.25, score=38.5]} {Human: ENSG00000184178, SCFD2, sec1 family domain containing 2, [RH, Score=93.6, Expect=3e-19]} {Mouse: ENSMUSG00000062110, Scfd2, Sec1 family domain containing 2, [RH, Score=88.6, Expect=7e-18]} {RNA1509_24657, RNA1509_27503} {RNA1310_10727, RNA1509_24657, RNA1509_27503} {RNA1509_24657, RNA1509_27503, RNA815_32647}
4.	MligTC455_44551	119	2.48	Mlig455_064247	Neo: - Age: Up-Down-Down	PRDX1	0.962	-	-	-	-	-	0.962	Mlig455_064247 {REF} {Length: 1961} {TRANSSPLICED} {Pfam: AhpC/TSA family [PF00578.23, score=130.3]; Redoxin [PF08534.12, score=67.5]; C-terminal domain of 1-Cys peroxiredoxin [PF10417.11, score=56.0]} {Human: ENSG00000117450, PRDX1, peroxiredoxin 1, [RH, Score=298, Expect=8e-102]} {Mouse: ENSMUSG00000028691, Prdx1, peroxiredoxin 1, [RH, Score=294, Expect=1e-100]} {Dmel: FBgn0040309, Jafrac1, thioredoxin peroxidase 1, [RH, Score=281, Expect=8e-96]} {Celegans: WBGene00006434, prdx-2, PeRoxireDoXin, [RH, Score=282, Expect=4e-96]} {Smed: dd_Smed_v6_7781_0_2, dd_Smed_v6_7781_0_2, [RH, Score=291, Expect=7e-100]} {RNA1509_29776} {RNA1310_37433} {RNA815_22691}
5.	MligTC455_38384	60	1.24	Mlig455_064432	Neo: - Age: logFC(26M/2M)=0.449	LAMA5	0.959	-	-	-	-	-	0.959	Mlig455_064432 {REF} {Length: 9825} {Pfam: Laminin EGF domain [PF00053.26, score=214.1]; Laminin G domain [PF02210.26, score=112.6]; Laminin G domain [PF00054.25, score=104.3]; Integrase zinc binding domain [PF17921.3, score=48.6]; Laminin B (Domain IV) [PF00052.20, score=27.2]} {Human: ENSG00000130702, LAMA5, laminin subunit alpha 5, [Score=456, Expect=4e-128]} {Mouse: ENSMUSG00000015647, Lama5, laminin, alpha 5, [Score=461, Expect=5e-130]} {Dmel: FBgn0002526, LanA, Laminin A, [Score=526, Expect=6e-150]} {Celegans: WBGene00001328, epi-1, Laminin-like protein epi-1, [Score=497, Expect=3e-141]} {Smed: dd_Smed_v6_7359_0_1, dd_Smed_v6_7359_0_1, [Score=290, Expect=1e-78]} {RNA1509_9236} {RNA1310_1265} {RNA815_12425}
6.	MligTC455_20081	395	8.24	Mlig455_030428	Neo: - Age: Down-Down-Up	YEATS4	0.957	0.957	-	-	-	-	-	Mlig455_030428 {REF} {Length: 1502} {TRANSSPLICED} {Pfam: YEATS family [PF03366.18, score=105.9]} {Human: ENSG00000127337, YEATS4, YEATS domain containing 4, [RH, Score=195, Expect=2e-62]} {Mouse: ENSMUSG00000020171, Yeats4, YEATS domain containing 4, [RH, Score=195, Expect=1e-62]} {Dmel: FBgn0031873, Gas41, [RH, Score=191, Expect=4e-61]} {Celegans: WBGene00001585, gfl-1, GAS41-Like, [RH, Score=178, Expect=3e-56]} {Smed: dd_Smed_v6_6828_0_1, dd_Smed_v6_6828_0_1, [RH, Score=186, Expect=4e-59]} {RNA1509_24299, RNA1509_34783} {RNA1310_24422, RNA1509_24299} {RNA1509_24299, RNA815_21390}
7.	MligTC455_08698	143	2.98	Mlig455_031781	Neo: - Age: Up-Down-Up, logFC(26M/2M)=0.478		0.956	0.956	-	-	-	-	-	Mlig455_031781 {REF} {Length: 1235} {TRANSSPLICED} {NoTransDecoderORF} {RNA1509_6571} {RNA1310_3089.2} {RNA815_122.1}
8.	MligTC455_41602	701	14.6	Mlig455_000984	Neo: Int S/G2/M Age: - Region-enriched R5: 1.342/0.02989		0.956	-	-	-	-	0.956	-	Mlig455_000984 {REF} {Length: 2204} {TRANSSPLICED} {Pfam: DCC1-like thiol-disulfide oxidoreductase [PF04134.14, score=75.2]} {RNA1509_10364} {RNA1310_36209} {RNA815_17788.1}
9.	MligTC455_37382	804	16.75	Mlig455_045573	Neo: - Age: Down-Up-Up, logFC(26M/2M)=0.463	CYP3A5	0.953	0.953	-	-	-	-	-	Mlig455_045573 {REF} {Length: 1950} {Pfam: Cytochrome P450 [PF00067.24, score=302.6]} {Human: ENSG00000106258, CYP3A5, cytochrome P450 family 3 subfamily A member 5, [Score=266, Expect=2e-82]; ENSG00000282301, CYP3A7-CYP3A51P, CYP3A7-CYP3A51P readthrough, [Score=255, Expect=7e-78]; ENSG00000160870, CYP3A7, cytochrome P450 family 3 subfamily A member 7, [Score=255, Expect=2e-78]; ENSG00000160868, CYP3A4, cytochrome P450 family 3 subfamily A member 4, [Score=254, Expect=5e-78]} {Mouse: ENSMUSG00000029727, Cyp3a13, cytochrome P450, family 3, subfamily a, polypeptide 13, [Score=277, Expect=4e-87]; ENSMUSG00000075551, Cyp3a41a, cytochrome P450, family 3, subfamily a, polypeptide 41A, [Score=266, Expect=1e-82]; ENSMUSG00000075552, Cyp3a41b, cytochrome P450, family 3, subfamily a, polypeptide 41B, [Score=266, Expect=1e-82]} {Dmel: FBgn0000473, Cyp6a2, Cytochrome P450-6a2, [Score=222, Expect=4e-66]} {Celegans: WBGene00011676, cyp-13A2, Putative cytochrome P450 CYP13A2, [RH, Score=229, Expect=1e-68]} {Smed: dd_Smed_v6_4319_0_1, dd_Smed_v6_4319_0_1, [RH, Score=327, Expect=1e-106]} {RNA1509_15610, RNA1509_34868} {RNA1310_14317, RNA1509_15610, RNA1509_34868} {RNA1509_15610, RNA1509_34868, RNA815_5514}
10.	MligTC455_44714	1016	21.16	Mlig455_000850, Mlig455_057164	Neo: - Age: Down-Up-Down	STX12	0.953	-	-	-	-	-	0.953	Mlig455_000850 {REF} {Length: 1958} {TRANSSPLICED} {Pfam: SNARE domain [PF05739.21, score=53.3]; Syntaxin-like protein [PF14523.8, score=38.2]} {Human: ENSG00000117758, STX12, syntaxin 12, [Score=81.3, Expect=1e-17]} {Mouse: ENSMUSG00000028879, Stx12, syntaxin 12, [Score=73.2, Expect=7e-15]} {Celegans: WBGene00009478, syx-7, SYntaXin, [Score=63.9, Expect=6e-12]} {Smed: dd_Smed_v6_4152_0_1, dd_Smed_v6_4152_0_1, [Score=68.6, Expect=1e-13]} {RNA1509_10705, RNA1509_33329, RNA1509_41073, RNA1509_41631, RNA1509_46149} {RNA1310_13588, RNA1509_10705, RNA1509_33329, RNA1509_41073, RNA1509_41631, RNA1509_46149} {RNA1509_10705, RNA1509_33329, RNA1509_41073, RNA1509_41631, RNA1509_46149, RNA815_16268} Mlig455_057164 {REF} {Length: 1953} {TRANSSPLICED} {Pfam: SNARE domain [PF05739.21, score=53.3]; Syntaxin-like protein [PF14523.8, score=38.2]} {Human: ENSG00000117758, STX12, syntaxin 12, [Score=81.3, Expect=1e-17]} {Mouse: ENSMUSG00000028879, Stx12, syntaxin 12, [Score=73.2, Expect=7e-15]} {Celegans: WBGene00009478, syx-7, SYntaXin, [Score=63.9, Expect=6e-12]} {Smed: dd_Smed_v6_4152_0_1, dd_Smed_v6_4152_0_1, [Score=68.6, Expect=1e-13]} {RNA1509_10705} {RNA1310_13588} {RNA815_16268}

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