TomoSeq data search

Data search

Results for MligTC455_48784

Cluster

Total UMI counts

Global CPM

Transcripts

Categories

Human homolog

Annotation

MligTC455_48784

32

0.67

Mlig455_045131

Neo: -

Age: Up-Down-Up

Regeneration-enriched R3: 7.044
Regeneration-enriched R5: 6.183

DCAF7

Mlig455_045131 {REF} {Length: 2344} {TRANSSPLICED} {Pfam: WD domain, G-beta repeat [PF00400.34, score=26.2]} {Human: ENSG00000136485, DCAF7, DDB1 and CUL4 associated factor 7, [RH, Score=600, Expect=0.0]} {Mouse: ENSMUSG00000049354, Dcaf7, DDB1 and CUL4 associated factor 7, [RH, Score=600, Expect=0.0]} {Dmel: FBgn0266848, wap, wings apart, [RH, Score=577, Expect=0.0]} {Celegans: WBGene00009976, swan-2, Seven WD repeats, AN11 family, [RH, Score=471, Expect=1e-165]} {Smed: dd_Smed_v6_3579_0_1, dd_Smed_v6_3579_0_1, [RH, Score=552, Expect=0.0]} {RNA1509_46682} {RNA1310_11837, RNA1509_46682} {RNA1509_46682, RNA815_37344}

Cumulative graph for MligTC455_48784

Region-enriched expression

Region	logFC	logCPM	Pvalue	FDR	Specificity
RegionR1	-3.255	1.003	0.99965	1.00000
RegionR2	1.224	1.003	0.99972	1.00000
RegionR3	-1.137	1.003	0.99983	1.00000
RegionR4	-0.775	1.003	0.62364	0.93313
RegionR5	-2.043	1.003	0.99978	1.00000
RegionR6	2.988	1.003	0.00904	0.15781
RegionR7	-1.226	1.003	0.99986	1.00000
RegionR8	4.225	1.003	0.01643	0.24978

Regeneration-enriched expression

Region	logFC	logCPM	PValue	FDR	Specificity
RegenerationR1	3.875	1.003	0.99997	1.00000
RegenerationR2	4.676	1.003	0.00178	0.06521
RegenerationR3	7.044	1.003	0.00006	0.00811
RegenerationR4	4.805	1.003	0.00310	0.07363
RegenerationR5	6.183	1.003	0.00004	0.00757
RegenerationR6	2.217	1.003	0.11469	0.41722
RegenerationBL	3.218	1.003	0.10147	0.37523
RegenerationTP	4.407	1.003	0.02049	0.24559

Genes with expression patterns similar to MligTC455_48784

Nr.	Cluster	Total UMI counts	Global CPM	Transcripts	Categories	Human homolog	Σ Spearman correlations	Int1	Int2	Int3	Reg1	Reg2	Reg3	Annotation
1.	MligTC455_48784	32	0.67	Mlig455_045131	Neo: - Age: Up-Down-Up Regeneration-enriched R3: 7.044 Regeneration-enriched R5: 6.183	DCAF7	2	-	-	-	-	1.000	1.000	Mlig455_045131 {REF} {Length: 2344} {TRANSSPLICED} {Pfam: WD domain, G-beta repeat [PF00400.34, score=26.2]} {Human: ENSG00000136485, DCAF7, DDB1 and CUL4 associated factor 7, [RH, Score=600, Expect=0.0]} {Mouse: ENSMUSG00000049354, Dcaf7, DDB1 and CUL4 associated factor 7, [RH, Score=600, Expect=0.0]} {Dmel: FBgn0266848, wap, wings apart, [RH, Score=577, Expect=0.0]} {Celegans: WBGene00009976, swan-2, Seven WD repeats, AN11 family, [RH, Score=471, Expect=1e-165]} {Smed: dd_Smed_v6_3579_0_1, dd_Smed_v6_3579_0_1, [RH, Score=552, Expect=0.0]} {RNA1509_46682} {RNA1310_11837, RNA1509_46682} {RNA1509_46682, RNA815_37344}
2.	MligTC455_10502	4	0.08	Mlig455_007277	Neo: - Age: Up-Up-Down, logFC(26M/2M)=1.667	PLSCR1	0.998	-	-	-	-	0.998	-	Mlig455_007277 {REF} {Length: 2251} {TRANSSPLICED} {Pfam: Scramblase [PF03803.17, score=280.5]} {Human: ENSG00000188313, PLSCR1, phospholipid scramblase 1, [RH, Score=261, Expect=7e-86]} {Mouse: ENSMUSG00000032369, Plscr1, phospholipid scramblase 1, [RH, Score=249, Expect=3e-81]; ENSMUSG00000032372, Plscr2, phospholipid scramblase 2, [RH, Score=248, Expect=4e-81]} {Dmel: FBgn0052056, scramb1, scramblase 1, [RH, Score=242, Expect=1e-77]} {Celegans: WBGene00011935, scrm-1, Phospholipid scramblase, [RH, Score=237, Expect=4e-77]} {Smed: dd_Smed_v6_4899_0_1, dd_Smed_v6_4899_0_1, [RH, Score=387, Expect=3e-136]} {RNA1509_40262} {RNA1310_18353.1, RNA1509_40262} {RNA1509_40262, RNA815_17963.1}
3.	MligTC455_10279	6	0.13	Mlig455_048696	Neo: - Age: -	ANK3	0.996	-	-	-	-	0.996	-	Mlig455_048696 {REF} {Length: 4169} {Pfam: Ankyrin repeats (3 copies) [PF12796.9, score=217.0]; Ankyrin repeats (many copies) [PF13637.8, score=170.5]; Ankyrin repeat [PF00023.32, score=164.6]; Ankyrin repeat [PF13606.8, score=140.4]; Ankyrin repeats (many copies) [PF13857.8, score=123.4]; THAP domain [PF05485.14, score=63.7]} {Human: ENSG00000151150, ANK3, ankyrin 3, [Score=196, Expect=5e-50]} {Mouse: ENSMUSG00000069601, Ank3, ankyrin 3, epithelial, [Score=197, Expect=1e-50]} {Dmel: FBgn0011747, Ank, Ankyrin, [Score=182, Expect=6e-46]} {Celegans: WBGene00006780, unc-44, AO66 ankyrin, [Score=167, Expect=2e-41]} {Smed: dd_Smed_v6_3523_0_1, dd_Smed_v6_3523_0_1, [Score=165, Expect=6e-41]} {RNA1509_42327} {RNA1310_55652} {RNA815_53468}
4.	MligTC455_24773	3	0.07	Mlig455_040219	Neo: - Age: Up-Down-Down	SOS1	0.996	-	-	-	-	0.996	-	Mlig455_040219 {REF} {Length: 5297} {TRANSSPLICED} {Pfam: RasGEF domain [PF00617.21, score=111.9]; RasGEF N-terminal motif [PF00618.22, score=76.7]; RhoGEF domain [PF00621.22, score=25.9]} {Human: ENSG00000115904, SOS1, SOS Ras/Rac guanine nucleotide exchange factor 1, [RH, Score=247, Expect=7e-66]; ENSG00000100485, SOS2, SOS Ras/Rho guanine nucleotide exchange factor 2, [RH, Score=240, Expect=1e-63]} {Mouse: ENSMUSG00000024241, Sos1, SOS Ras/Rac guanine nucleotide exchange factor 1, [RH, Score=253, Expect=4e-68]} {Dmel: FBgn0001965, Sos, Son of sevenless, [RH, Score=223, Expect=2e-58]} {Celegans: WBGene00004947, sos-1, Son of sevenless homolog, [RH, Score=212, Expect=3e-55]} {Smed: dd_Smed_v6_5212_0_1, dd_Smed_v6_5212_0_1, [RH, Score=195, Expect=4e-50]} {RNA1509_9358} {RNA1310_1170.1} {RNA815_4025}
5.	MligTC455_07223	16	0.33	Mlig455_005397, Mlig455_046574, Mlig455_067813	Neo: - Age: -		0.988	-	-	-	-	0.988	-	Mlig455_005397 {REF} {Length: 124} {NoTransDecoderORF} {RNA1509_18716} {RNA1310_63361.1} {RNA815_37775} Mlig455_046574 {REF} {Length: 115} {NoTransDecoderORF} {RNA1509_18716} {RNA1310_76661} {RNA815_37775} Mlig455_067813 {REF} {Length: 129} {NoTransDecoderORF} {RNA1509_18716} {RNA1310_63361.1} {RNA815_37775}
6.	MligTC455_10419	3	0.06	Mlig455_002299	Neo: - Age: -		0.988	-	-	-	-	0.988	-	Mlig455_002299 {REF} {Length: 3216} {Pfam: Cysteine rich repeat [PF02363.21, score=19.0]} {Mouse: ENSMUSG00000024246, Thumpd2, THUMP domain containing 2, [Score=59.7, Expect=8e-10]} {Celegans: WBGene00018026, F35A5.4, [Score=62.0, Expect=7e-11]} {RNA1509_34741, RNA1509_50790} {RNA1310_31251, RNA1509_50790} {RNA1509_50790, RNA815_14258}
7.	MligTC455_37196	41	0.85	Mlig455_050488	Neo: - Age: - Region-enriched R4: 5.002/0.01104		0.976	-	-	-	-	0.976	-	Mlig455_050488 {REF} {Length: 2623} {TRANSSPLICED} {RNA1509_19236} {RNA1310_67447} {RNA815_54054}
8.	MligTC455_12790	14	0.28	Mlig455_018710, Mlig455_018746, Mlig455_018914	Neo: - Age: - Regeneration-enriched R3: 8.221 Regeneration-enriched R5: 5.165		0.974	-	-	-	-	0.974	-	Mlig455_018710 {REF} {Length: 435} Mlig455_018746 {REF} {Length: 391} {RNA1310_101839} {RNA815_52263} Mlig455_018914 {REF} {Length: 552}
9.	MligTC455_15140	13	0.26	Mlig455_018998	Neo: - Age: -		0.965	-	-	-	-	0.965	-	Mlig455_018998 {REF} {Length: 1600}
10.	MligTC455_42938	103	2.14	Mlig455_043293	Neo: - Age: logFC(26M/2M)=-0.614	USH1G	0.965	-	-	-	-	0.965	-	Mlig455_043293 {REF} {Length: 3811} {Pfam: Ankyrin repeats (3 copies) [PF12796.9, score=75.4]; Ankyrin repeats (many copies) [PF13637.8, score=51.5]; Ankyrin repeat [PF00023.32, score=40.4]; Ankyrin repeats (many copies) [PF13857.8, score=38.1]; Ankyrin repeat [PF13606.8, score=36.2]; SAM domain (Sterile alpha motif) [PF00536.32, score=30.9]} {Human: ENSG00000182040, USH1G, USH1 protein network component sans, [Score=201, Expect=6e-58]} {Mouse: ENSMUSG00000045288, Ush1g, USH1 protein network component sans, [Score=204, Expect=4e-59]} {Dmel: FBgn0033785, Sans, Scaffold protein containing ankyrin repeats and SAM domain, [RH, Score=149, Expect=7e-39]} {Celegans: WBGene00013835, mlt-4, Molting protein MLT-4, [Score=62.0, Expect=6e-10]} {Smed: dd_Smed_v6_68524_0_1, dd_Smed_v6_68524_0_1, [RH, Score=113, Expect=8e-29]} {RNA1509_17342} {RNA1310_11835.1, RNA1509_17342} {RNA1509_17342, RNA815_5253}
11.	MligTC455_18917	66	1.37	Mlig455_039555, Mlig455_051360	Neo: - Age: -		0.964	-	-	-	-	0.964	-	Mlig455_039555 {REF} {Length: 396} {RNA1310_56672} {RNA815_59682} Mlig455_051360 {REF} {Length: 384} {RNA1310_56672} {RNA815_59682}
12.	MligTC455_12275	55	1.15	Mlig455_044441	Neo: - Age: -	FGL1	0.963	-	-	-	-	0.963	-	Mlig455_044441 {REF} {Length: 1471} {Pfam: Fibrinogen beta and gamma chains, C-terminal globular domain [PF00147.20, score=108.4]} {Human: ENSG00000104760, FGL1, fibrinogen like 1, [Score=84.7, Expect=3e-18]; ENSG00000171560, FGA, fibrinogen alpha chain, [Score=83.2, Expect=5e-17]; ENSG00000171557, FGG, fibrinogen gamma chain, [Score=80.9, Expect=2e-16]} {Mouse: ENSMUSG00000031594, Fgl1, fibrinogen-like protein 1, [Score=85.5, Expect=1e-18]; ENSMUSG00000033544, Angptl1, angiopoietin-like 1, [Score=82.0, Expect=5e-17]} {Dmel: FBgn0033312, CG8642, [Score=76.3, Expect=3e-15]} {Celegans: WBGene00017013, ensh-1, [Score=51.6, Expect=3e-07]} {Smed: dd_Smed_v6_18326_0_1, dd_Smed_v6_18326_0_1, [Score=75.5, Expect=4e-15]} {RNA1310_40379} {RNA815_26634}
13.	MligTC455_35959	50	1.04	Mlig455_026640	Neo: - Age: -		0.957	-	-	-	-	0.957	-	Mlig455_026640 {REF} {Length: 147} {TRANSSPLICED} {NoTransDecoderORF} {RNA1310_65893} {RNA815_64258}
14.	MligTC455_09539	7	0.14	Mlig455_018600	Neo: - Age: -	TNN	0.953	-	-	-	-	0.953	-	Mlig455_018600 {REF} {Length: 947} {Pfam: Fibrinogen beta and gamma chains, C-terminal globular domain [PF00147.20, score=121.5]} {Human: ENSG00000120332, TNN, tenascin N, [Score=100, Expect=3e-24]; ENSG00000041982, TNC, tenascin C, [Score=100, Expect=6e-24]; ENSG00000116147, TNR, tenascin R, [Score=98.6, Expect=2e-23]} {Mouse: ENSMUSG00000026725, Tnn, tenascin N, [Score=104, Expect=9e-26]; ENSMUSG00000028364, Tnc, tenascin C, [Score=101, Expect=2e-24]; ENSMUSG00000015829, Tnr, tenascin R, [Score=99.4, Expect=7e-24]} {Dmel: FBgn0034160, CG5550, [Score=87.8, Expect=4e-21]} {RNA1310_149069} {RNA815_40596}
15.	MligTC455_11118	3	0.05	Mlig455_029786	Neo: - Age: -		0.952	-	-	-	-	0.952	-	Mlig455_029786 {REF} {Length: 1368} {NoTransDecoderORF} {RNA1310_137032}
16.	MligTC455_07265	9	0.2	Mlig455_068320	Neo: - Age: -		0.951	-	-	-	-	0.951	-	Mlig455_068320 {REF} {Length: 296} {NoTransDecoderORF} {RNA1509_59804} {RNA1310_35910.2} {RNA815_21530}
17.	MligTC455_21619	8	0.16	Mlig455_044119	Neo: - Age: -		0.951	-	-	-	-	0.951	-	Mlig455_044119 {REF} {Length: 919} {NoTransDecoderORF} {RNA1509_49326} {RNA1310_50572.1} {RNA815_53737}
18.	MligTC455_52937	5988	124.75	Mlig455_067956	Neo: - Age: logFC(26M/2M)=0.410	XBP1	0.95	-	-	-	-	-	0.950	Mlig455_067956 {REF} {Length: 2205} {TRANSSPLICED} {Pfam: Basic region leucine zipper [PF07716.17, score=38.6]; bZIP transcription factor [PF00170.23, score=33.8]; bZIP Maf transcription factor [PF03131.19, score=25.6]} {Human: ENSG00000100219, XBP1, X-box binding protein 1, [RH, Score=71.2, Expect=7e-13]} {Mouse: ENSMUSG00000020484, Xbp1, X-box binding protein 1, [RH, Score=71.2, Expect=2e-13]} {Dmel: FBgn0021872, Xbp1, X box binding protein-1, [RH, Score=66.2, Expect=2e-11]} {Celegans: WBGene00006959, xbp-1, X-box Binding Protein homolog; X-box binding protein unprocessed isoform, [RH, Score=75.9, Expect=5e-15]} {Smed: dd_Smed_v6_415_0_1, dd_Smed_v6_415_0_1, [RH, Score=65.5, Expect=2e-12]} {RNA1509_7645} {RNA1310_10942} {RNA815_3399.1}

Berezikov Lab - 2020-2021 © ERIBA