TomoSeq data search

Data search

Results for MligTC455_48875

Cluster

Total UMI counts

Global CPM

Transcripts

Categories

Human homolog

Annotation

MligTC455_48875

193

4.02

Mlig455_021434

Neo: -

Age: Up-Down-Down

Region-enriched R5: 2.232/0.00449

Mlig455_021434 {REF} {Length: 650} {NoTransDecoderORF} {RNA1310_59863.2} {RNA815_36776}

Cumulative graph for MligTC455_48875

Region-enriched expression

Region	logFC	logCPM	Pvalue	FDR	Specificity
RegionR1	-6.442	2.716	0.11757	0.70631
RegionR2	1.792	2.716	0.06571	0.31067
RegionR3	0.433	2.716	0.64770	1.00000
RegionR4	0.884	2.716	0.36839	0.69149
RegionR5	2.232	2.716	0.00035	0.00449
RegionR6	0.831	2.716	0.38784	0.96382
RegionR7	0.13	2.716	0.81585	1.00000
RegionR8	0.14	2.716	0.81807	1.00000

Regeneration-enriched expression

Region	logFC	logCPM	PValue	FDR	Specificity
RegenerationR1	0.438	2.716	0.99992	1.00000
RegenerationR2	-0.482	2.716	0.36346	0.79065
RegenerationR3	0.729	2.716	0.26663	0.70145
RegenerationR4	-0.385	2.716	0.57050	0.90180
RegenerationR5	-0.171	2.716	0.73645	0.96675
RegenerationR6	0.819	2.716	0.20193	0.54334
RegenerationBL	0.568	2.716	0.51672	0.87945
RegenerationTP	-1.875	2.716	0.17830	0.61330

Genes with expression patterns similar to MligTC455_48875

Nr.	Cluster	Total UMI counts	Global CPM	Transcripts	Categories	Human homolog	Σ Spearman correlations	Int1	Int2	Int3	Reg1	Reg2	Reg3	Annotation
1.	MligTC455_48875	193	4.02	Mlig455_021434	Neo: - Age: Up-Down-Down Region-enriched R5: 2.232/0.00449		6	1.000	1.000	1.000	1.000	1.000	1.000	Mlig455_021434 {REF} {Length: 650} {NoTransDecoderORF} {RNA1310_59863.2} {RNA815_36776}
2.	MligTC455_25283	294	6.12	Mlig455_053111	Neo: - Age: Down-Up-Down Region-enriched R5: 3.648/0.00000	ZNF511	1.822	0.854	-	-	-	-	0.968	Mlig455_053111 {REF} {Length: 1077} {Human: ENSG00000198546, ZNF511, zinc finger protein 511, [RH, Score=58.9, Expect=5e-10]; ENSG00000283496, ZNF511-PRAP1, ZNF511-PRAP1 readthrough, [RH, Score=58.2, Expect=1e-09]} {Mouse: ENSMUSG00000025470, Zfp511, zinc finger protein 511, [RH, Score=59.7, Expect=1e-10]} {Dmel: FBgn0016970, l(2)k10201, lethal (2) k10201, [Score=45.8, Expect=6e-06]} {RNA1509_38926} {RNA1310_47994} {RNA815_20540.1}
3.	MligTC455_33548	398	8.29	Mlig455_003575, Mlig455_015476	Neo: - Age: -		1.793	-	-	-	0.842	-	0.951	Mlig455_003575 {REF} {Length: 4053} {TRANSSPLICED} {RNA1509_39137} {RNA1310_29092} {RNA815_13500} Mlig455_015476 {REF} {Length: 4038} {TRANSSPLICED} {RNA1509_13666, RNA1509_39137} {RNA1310_29092, RNA1509_13666, RNA1509_39137} {RNA1509_13666, RNA1509_39137, RNA815_13500}
4.	MligTC455_03563	760	15.83	Mlig455_025786	Neo: Int S/G2/M Age: -	POLR2B	1.679	0.722	-	-	0.957	-	-	Mlig455_025786 {REF} {Length: 1377} {Pfam: RNA polymerase Rpb2, domain 6 [PF00562.30, score=427.0]; RNA polymerase beta subunit [PF04563.17, score=208.1]; RNA polymerase Rpb2, domain 2 [PF04561.16, score=176.6]; RNA polymerase Rpb2, domain 7 [PF04560.22, score=117.0]; RNA polymerase Rpb2, domain 3 [PF04565.18, score=90.9]; RNA polymerase Rpb2, domain 4 [PF04566.15, score=82.5]; RNA polymerase Rpb2, domain 5 [PF04567.19, score=62.5]} {Human: ENSG00000047315, POLR2B, RNA polymerase II subunit B, [RH, Score=2034, Expect=0.0]} {Mouse: ENSMUSG00000029250, Polr2b, polymerase (RNA) II (DNA directed) polypeptide B, [RH, Score=2033, Expect=0.0]} {Dmel: FBgn0262955, RpII140, RNA polymerase II 140kD subunit, [RH, Score=1983, Expect=0.0]} {Celegans: WBGene00016140, rpb-2, DNA-directed RNA polymerase II subunit RPB2, [RH, Score=1895, Expect=0.0]} {Smed: dd_Smed_v6_2182_0_1, dd_Smed_v6_2182_0_1, [RH, Score=1716, Expect=0.0]} {RNA1509_1580} {RNA1310_264.1} {RNA815_603}
5.	MligTC455_48288	459	9.55	Mlig455_025872, Mlig455_025962	Neo: Int S/G2/M Age: Up-Down-Up, logFC(26M/2M)=1.174 Region-enriched R5: 2.252/0.00477		0.963	-	-	-	-	-	0.963	Mlig455_025872 {REF} {Length: 1078} {TRANSSPLICED} {RNA1509_54367} {RNA1310_36589.1, RNA1509_54367} {RNA1509_54367, RNA815_54285} Mlig455_025962 {REF} {Length: 989} {TRANSSPLICED} {RNA1509_54367} {RNA1310_36589.1} {RNA815_54285}
6.	MligTC455_36529	861	17.95	Mlig455_058601	Neo: Int S/G2/M Age: logFC(26M/2M)=0.433	PMPCB	0.957	-	-	-	0.957	-	-	Mlig455_058601 {REF} {Length: 4202} {Pfam: Insulinase (Peptidase family M16) [PF00675.22, score=174.8]; Peptidase M16 inactive domain [PF05193.23, score=108.1]} {Human: ENSG00000105819, PMPCB, peptidase, mitochondrial processing beta subunit, [RH, Score=504, Expect=2e-176]} {Mouse: ENSMUSG00000029017, Pmpcb, peptidase (mitochondrial processing) beta, [RH, Score=495, Expect=5e-173]} {Dmel: FBgn0038271, UQCR-C1, Ubiquinol-cytochrome c reductase core protein 1, [RH, Score=494, Expect=5e-173]} {Celegans: WBGene00013880, mppb-1, Mitochondrial Processing Peptidase Beta, [RH, Score=379, Expect=6e-128]} {Smed: dd_Smed_v6_7914_0_1, dd_Smed_v6_7914_0_1, [RH, Score=427, Expect=5e-147]} {RNA1509_28355} {RNA1310_8781.1} {RNA815_3008.1}
7.	MligTC455_08715	237	4.94	Mlig455_004262	Neo: - Age: -	IPO9	0.954	-	-	-	0.954	-	-	Mlig455_004262 {REF} {Length: 4849} {TRANSSPLICED} {Pfam: Importin-beta N-terminal domain [PF03810.21, score=26.9]; rRNA processing/ribosome biogenesis [PF08167.14, score=23.5]; Exportin 1-like protein [PF08389.14, score=19.2]} {Human: ENSG00000198700, IPO9, importin 9, [RH, Score=558, Expect=0.0]} {Mouse: ENSMUSG00000041879, Ipo9, importin 9, [RH, Score=565, Expect=0.0]} {Dmel: FBgn0037894, Ranbp9, [RH, Score=374, Expect=1e-112]} {RNA1509_15102} {RNA1310_3940} {RNA815_16834}
8.	MligTC455_22537	139	2.89	Mlig455_016993	Neo: - Age: -		0.953	-	-	-	-	0.953	-	Mlig455_016993 {REF} {Length: 897} {RNA1509_50526} {RNA1310_65793.1} {RNA815_39534}
9.	MligTC455_17762	540	11.25	Mlig455_044636	Neo: Int S/G2/M Age: - Region-enriched R5: 1.550/0.00255		0.95	-	-	-	-	-	0.950	Mlig455_044636 {REF} {Length: 6526} {Pfam: Centrosomin N-terminal motif 1 [PF07989.13, score=36.3]; Crescentin protein [PF19220.2, score=25.3]; Autophagy protein 16 (ATG16) [PF08614.13, score=19.3]} {RNA1509_3212} {RNA1310_722.1} {RNA815_432.1}

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