TomoSeq data search

Data search

Results for MligTC455_22537

Cluster

Total UMI counts

Global CPM

Transcripts

Categories

Human homolog

Annotation

MligTC455_22537

139

2.89

Mlig455_016993

Neo: -

Age: -

Mlig455_016993 {REF} {Length: 897} {RNA1509_50526} {RNA1310_65793.1} {RNA815_39534}

Cumulative graph for MligTC455_22537

Region-enriched expression

Region	logFC	logCPM	Pvalue	FDR	Specificity
RegionR1	-3.201	2.321	0.57330	1.00000
RegionR2	1.242	2.321	0.28144	0.66818
RegionR3	0.044	2.321	0.84260	1.00000
RegionR4	-0.386	2.321	0.94332	1.00000
RegionR5	-0.807	2.321	0.98039	1.00000
RegionR6	0.851	2.321	0.38926	0.96432
RegionR7	-0.49	2.321	0.95932	1.00000
RegionR8	2.746	2.321	0.03387	0.36162

Regeneration-enriched expression

Region	logFC	logCPM	PValue	FDR	Specificity
RegenerationR1	-2.23	2.321	0.99979	1.00000
RegenerationR2	-0.299	2.321	0.58219	0.90802
RegenerationR3	-0.42	2.321	0.57969	0.89867
RegenerationR4	-0.913	2.321	0.29853	0.74063
RegenerationR5	0.779	2.321	0.28950	0.71736
RegenerationR6	0.112	2.321	0.89195	1.00000
RegenerationBL	-1.781	2.321	0.12127	0.41305
RegenerationTP	-1.589	2.321	0.22790	0.67303

Genes with expression patterns similar to MligTC455_22537

Nr.	Cluster	Total UMI counts	Global CPM	Transcripts	Categories	Human homolog	Σ Spearman correlations	Int1	Int2	Int3	Reg1	Reg2	Reg3	Annotation
1.	MligTC455_22537	139	2.89	Mlig455_016993	Neo: - Age: -		6	1.000	1.000	1.000	1.000	1.000	1.000	Mlig455_016993 {REF} {Length: 897} {RNA1509_50526} {RNA1310_65793.1} {RNA815_39534}
2.	MligTC455_35840	39	0.81	Mlig455_029909, Mlig455_063972	Neo: - Age: -		1.68	-	-	-	-	0.951	0.729	Mlig455_029909 {REF} {Length: 2792} {Pfam: 7 transmembrane receptor (rhodopsin family) [PF00001.23, score=22.5]} {RNA1509_56135} {RNA1310_24780.1} {RNA815_41468} Mlig455_063972 {REF} {Length: 1073} {Pfam: 7 transmembrane receptor (rhodopsin family) [PF00001.23, score=20.4]}
3.	MligTC455_17464	409	8.52	Mlig455_048989, Mlig455_049006, Mlig455_067762	Neo: - Age: Down-Up-Up, logFC(26M/2M)=0.512 Regeneration-downregulated BL: -7.800 Regeneration-depleted BL: -7.800		0.985	0.985	-	-	-	-	-	Mlig455_048989 {REF} {Length: 1272} {RNA1310_37715} {RNA815_39767} Mlig455_049006 {REF} {Length: 1028} {RNA1310_37715} {RNA815_39767} Mlig455_067762 {REF} {Length: 1353} {RNA1310_37715} {RNA815_39767}
4.	MligTC455_11717	89	1.85	Mlig455_061662, Mlig455_061663	Neo: - Age: -		0.96	0.960	-	-	-	-	-	Mlig455_061662 {REF} {Length: 1100} {RNA1509_13494} {RNA1310_72946} {RNA815_44318} Mlig455_061663 {REF} {Length: 1440} {RNA1310_86013} {RNA815_53527}
5.	MligTC455_27679	168	3.49	Mlig455_059443	Neo: - Age: -	GOLPH3	0.959	0.959	-	-	-	-	-	Mlig455_059443 {REF} {Length: 2464} {TRANSSPLICED} {Pfam: Golgi phosphoprotein 3 (GPP34) [PF05719.13, score=180.2]} {Human: ENSG00000113384, GOLPH3, golgi phosphoprotein 3, [RH, Score=355, Expect=4e-123]} {Mouse: ENSMUSG00000022200, Golph3, golgi phosphoprotein 3, [RH, Score=352, Expect=5e-122]} {Dmel: FBgn0267378, sau, sauron, [Score=344, Expect=6e-119]} {Celegans: WBGene00021644, Y47G6A.18, [Score=323, Expect=5e-111]} {Smed: dd_Smed_v6_1770_0_2, dd_Smed_v6_1770_0_2, [Score=340, Expect=6e-118]} {RNA1310_29186} {RNA815_27407}
6.	MligTC455_41669	480	10.01	Mlig455_040778, Mlig455_064613	Neo: - Age: Down-Down-Up		0.956	0.956	-	-	-	-	-	Mlig455_040778 {REF} {Length: 2233} {RNA1310_31511} {RNA815_21534} Mlig455_064613 {REF} {Length: 1332} {RNA1310_32935} {RNA815_21534}
7.	MligTC455_42825	72	1.51	Mlig455_053406	Neo: - Age: -		0.955	-	-	-	-	0.955	-	Mlig455_053406 {REF} {Length: 1756} {NoTransDecoderORF} {RNA1509_18414} {RNA1310_62493} {RNA815_38342}
8.	MligTC455_08660	30	0.63	Mlig455_005536	Neo: - Age: logFC(26M/2M)=-0.847		0.954	0.954	-	-	-	-	-	Mlig455_005536 {REF} {Length: 3312} {RNA1509_30152, RNA1509_46404} {RNA1310_20821, RNA1509_30152, RNA1509_46404} {RNA1509_30152, RNA1509_46404, RNA815_3479.2}
9.	MligTC455_48875	193	4.02	Mlig455_021434	Neo: - Age: Up-Down-Down Region-enriched R5: 2.232/0.00449		0.953	-	-	-	-	0.953	-	Mlig455_021434 {REF} {Length: 650} {NoTransDecoderORF} {RNA1310_59863.2} {RNA815_36776}
10.	MligTC455_27796	664	13.84	Mlig455_005664	Neo: - Age: Up-Down-Down, logFC(26M/2M)=-0.450	HELZ2	0.95	0.950	-	-	-	-	-	Mlig455_005664 {REF} {Length: 8120} {Pfam: RNB domain [PF00773.21, score=158.5]; AAA domain [PF13086.8, score=134.0]; AAA domain [PF13087.8, score=128.8]; AAA domain [PF13604.8, score=26.8]; Viral (Superfamily 1) RNA helicase [PF01443.20, score=21.9]; UvrD-like helicase C-terminal domain [PF13361.8, score=19.7]; UvrD-like helicase C-terminal domain [PF13538.8, score=19.6]} {Human: ENSG00000130589, HELZ2, helicase with zinc finger 2, [Score=148, Expect=6e-35]} {Mouse: ENSMUSG00000027580, Helz2, helicase with zinc finger 2, transcriptional coactivator, [Score=146, Expect=3e-34]} {Dmel: FBgn0039183, Dis3, [Score=110, Expect=8e-24]} {Celegans: WBGene00018612, disl-2, DIS3-like exonuclease 2, [Score=103, Expect=8e-22]} {Smed: dd_Smed_v6_8176_0_1, dd_Smed_v6_8176_0_1, [RH, Score=326, Expect=7e-90]} {RNA1509_18632} {RNA1310_275} {RNA815_982.1}
11.	MligTC455_51395	121	2.52	Mlig455_005756	Neo: - Age: -	IGFALS	0.95	-	-	-	-	0.950	-	Mlig455_005756 {REF} {Length: 3785} {Pfam: Leucine rich repeat [PF13855.8, score=285.4]; Leucine Rich repeats (2 copies) [PF12799.9, score=116.4]; BspA type Leucine rich repeat region (6 copies) [PF13306.8, score=90.8]; Leucine-rich repeat [PF14580.8, score=72.0]; Leucine Rich Repeat [PF00560.35, score=37.6]} {Human: ENSG00000099769, IGFALS, insulin like growth factor binding protein acid labile subunit, [RH, Score=160, Expect=8e-41]} {Mouse: ENSMUSG00000046070, Igfals, insulin-like growth factor binding protein, acid labile subunit, [RH, Score=152, Expect=3e-38]} {Dmel: FBgn0259677, CG42346, [RH, Score=140, Expect=1e-33]} {Celegans: WBGene00016974, lron-15, ELRR (Extracellular Leucine-Rich Repeat) ONly, [Score=129, Expect=3e-30]} {Smed: dd_Smed_v6_3513_0_1, dd_Smed_v6_3513_0_1, [RH, Score=80.1, Expect=1e-15]} {RNA1509_59023} {RNA1310_6354} {RNA815_7087}

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