M. lignano Tomo-Seq
Mlig455 transcriptome Search Regeneration Regions Sections Download

Data search


search
Exact
Search

Results for MligTC455_48960

Cluster Total UMI counts Global CPM Transcripts Categories Human homolog Annotation
MligTC455_48960 52 1.09 Mlig455_014079

Neo: -

Age: -

 Mlig455_014079 {REF} {Length: 2345} {Pfam: PMP-22/EMP/MP20/Claudin tight junction [PF13903.8, score=25.9]; PMP-22/EMP/MP20/Claudin family [PF00822.22, score=21.0]} {Dmel: FBgn0034267, CG4984, [RH, Score=69.7, Expect=7e-13]} {Celegans: WBGene00016706, C46C11.3, [Score=47.4, Expect=4e-06]} {Smed: dd_Smed_v6_9946_0_1, dd_Smed_v6_9946_0_1, [RH, Score=56.2, Expect=5e-09]} {RNA1509_43217} {RNA1310_16701} {RNA815_8110}

Cumulative graph for MligTC455_48960

Region-enriched expression

Region logFC logCPM Pvalue FDR Specificity
RegionR1 -5.226 1.344 0.99967 1.00000
RegionR2 2.75 1.344 0.05681 0.28633
RegionR3 1.855 1.344 0.13555 0.63022
RegionR4 0.036 1.344 0.76383 1.00000
RegionR5 0.125 1.344 0.74019 1.00000
RegionR6 1.911 1.344 0.14448 0.67969
RegionR7 2.101 1.344 0.16628 0.75169
RegionR8 -3.551 1.344 0.99952 1.00000

Regeneration-enriched expression

Region logFC logCPM PValue FDR Specificity
RegenerationR1 1.351 1.344 0.99990 1.00000
RegenerationR2 -0.419 1.344 0.65534 0.93869
RegenerationR3 1.322 1.344 0.17793 0.61322
RegenerationR4 0.482 1.344 0.66511 0.94019
RegenerationR5 0.009 1.344 0.98578 1.00000
RegenerationR6 -2.763 1.344 0.06786 0.32657
RegenerationBL 0.549 1.344 0.71039 1.00000
RegenerationTP 4.107 1.344 0.02087 0.24715


Genes with expression patterns similar to MligTC455_48960

Nr. Cluster Total UMI counts Global CPM Transcripts Categories Human homolog Σ Spearman correlations Int1 Int2 Int3 Reg1 Reg2 Reg3 Annotation
1. MligTC455_48960 52 1.09 Mlig455_014079

Neo: -

Age: -

 5 1.000 1.000 - 1.000 1.000 1.000 Mlig455_014079 {REF} {Length: 2345} {Pfam: PMP-22/EMP/MP20/Claudin tight junction [PF13903.8, score=25.9]; PMP-22/EMP/MP20/Claudin family [PF00822.22, score=21.0]} {Dmel: FBgn0034267, CG4984, [RH, Score=69.7, Expect=7e-13]} {Celegans: WBGene00016706, C46C11.3, [Score=47.4, Expect=4e-06]} {Smed: dd_Smed_v6_9946_0_1, dd_Smed_v6_9946_0_1, [RH, Score=56.2, Expect=5e-09]} {RNA1509_43217} {RNA1310_16701} {RNA815_8110}
2. MligTC455_36704 63 1.32 Mlig455_020575

Neo: -

Age: -

Region-enriched R2: 5.118/0.04973

 1.726 - - - - 0.951 0.775 Mlig455_020575 {REF} {Length: 4566} {NoTransDecoderORF} {RNA1509_44743} {RNA1310_5450.1} {RNA815_16253.1}
3. MligTC455_42393 11 0.23 Mlig455_037119

Neo: -

Age: -

 1.681 - - - 0.705 0.976 - Mlig455_037119 {REF} {Length: 2722} {NoTransDecoderORF} {RNA1509_55284} {RNA1310_61594, RNA1509_55284} {RNA1509_55284, RNA815_11130}
4. MligTC455_09763 31 0.65 Mlig455_042548

Neo: -

Age: -

 0.985 - - - - 0.985 - Mlig455_042548 {REF} {Length: 2075} {RNA1509_32911} {RNA1310_1680} {RNA815_1218}
5. MligTC455_33238 26 0.55 Mlig455_003808

Neo: -

Age: Down-Up-Down

 0.985 - - - - 0.985 - Mlig455_003808 {REF} {Length: 1403} {Pfam: Poly(ADP-ribose) polymerase catalytic domain [PF00644.22, score=52.4]} {Dmel: FBgn0027508, Tnks, tankyrase, [Score=52.4, Expect=2e-07]} {Smed: dd_Smed_v6_8547_0_1, dd_Smed_v6_8547_0_1, [Score=48.9, Expect=2e-06]} {RNA1509_36860} {RNA1310_30949} {RNA815_12481}
6. MligTC455_12202 65 1.36 Mlig455_049470

Neo: -

Age: -

 0.976 - - - 0.976 - - Mlig455_049470 {REF} {Length: 998} {NoTransDecoderORF} {RNA1310_32030.1} {RNA815_32240}
7. MligTC455_43427 1427 29.74 Mlig455_013530, Mlig455_013590, Mlig455_061388

Neo: -

Age: -

Region-enriched R3: 2.137/0.00098

 0.974 - - - - 0.974 -

Mlig455_013530 {REF} {Length: 948} {RNA1509_9227} {RNA1310_163.1} {RNA815_1571}

Mlig455_013590 {REF} {Length: 1013} {RNA1509_9227} {RNA1310_170} {RNA815_1571}

Mlig455_061388 {REF} {Length: 960} {RNA1509_9227} {RNA1310_170} {RNA815_1571}
8. MligTC455_39649 137 2.85 Mlig455_009449

Neo: -

Age: -

 MAP4K3 0.973 - - - - 0.973 - Mlig455_009449 {REF} {Length: 5758} {Pfam: Protein kinase domain [PF00069.27, score=202.4]; Protein tyrosine and serine/threonine kinase [PF07714.19, score=133.0]; CNH domain [PF00780.24, score=88.9]; ABC1 atypical kinase-like domain [PF03109.18, score=28.4]; Cobalamin biosynthesis protein CobT [PF06213.14, score=20.4]} {Human: ENSG00000011566, MAP4K3, mitogen-activated protein kinase kinase kinase kinase 3, [RH, Score=338, Expect=6e-101]; ENSG00000168067, MAP4K2, mitogen-activated protein kinase kinase kinase kinase 2, [RH, Score=329, Expect=4e-98]; ENSG00000282928, MAP4K1, mitogen-activated protein kinase kinase kinase kinase 1, [RH, Score=326, Expect=5e-97]; ENSG00000104814, MAP4K1, mitogen-activated protein kinase kinase kinase kinase 1, [RH, Score=326, Expect=5e-97]} {Mouse: ENSMUSG00000024242, Map4k3, mitogen-activated protein kinase kinase kinase kinase 3, [RH, Score=337, Expect=2e-100]; ENSMUSG00000106850, Map4k2, mitogen-activated protein kinase kinase kinase kinase 2, [RH, Score=330, Expect=9e-99]; ENSMUSG00000024948, Map4k2, mitogen-activated protein kinase kinase kinase kinase 2, [RH, Score=330, Expect=9e-99]; ENSMUSG00000037337, Map4k1, mitogen-activated protein kinase kinase kinase kinase 1, [RH, Score=324, Expect=3e-96]} {Dmel: FBgn0263395, hppy, happyhour, [RH, Score=319, Expect=6e-92]} {Celegans: WBGene00022603, gck-2, Mitogen-activated protein kinase kinase kinase kinase, [RH, Score=310, Expect=1e-91]} {Smed: dd_Smed_v6_9984_0_1, dd_Smed_v6_9984_0_1, [RH, Score=348, Expect=4e-112]} {RNA1509_10441, RNA1509_31584, RNA1509_42145} {RNA1310_3426.1, RNA1509_10441, RNA1509_31584, RNA1509_42145} {RNA1509_10441, RNA1509_31584, RNA1509_42145, RNA815_6005}
9. MligTC455_00184 8 0.17 Mlig455_058285

Neo: -

Age: -

 0.972 - - - - 0.972 - Mlig455_058285 {REF} {Length: 297} {NoTransDecoderORF}
10. MligTC455_03357 7 0.14 Mlig455_041258

Neo: -

Age: -

 CCDC15 0.972 - - - - 0.972 - Mlig455_041258 {REF} {Length: 1532} {Human: ENSG00000149548, CCDC15, coiled-coil domain containing 15, [Score=78.6, Expect=1e-14]} {Mouse: ENSMUSG00000026090, 2010300C02Rik, RIKEN cDNA 2010300C02 gene, [Score=69.3, Expect=6e-12]} {Dmel: FBgn0053265, Muc68E, Mucin 68E, [Score=104, Expect=3e-23]} {RNA1310_54182} {RNA815_44634}
11. MligTC455_10651 37 0.76 Mlig455_050743

Neo: -

Age: -

 0.971 - - - - 0.971 - Mlig455_050743 {REF} {Length: 486} {NoTransDecoderORF} {RNA1310_45533}
12. MligTC455_18934 23 0.47 Mlig455_012122, Mlig455_012314, Mlig455_015441, Mlig455_051165

Neo: -

Age: -

 0.971 - - - - 0.971 -

Mlig455_012122 {REF} {Length: 2894} {Pfam: Reverse transcriptase (RNA-dependent DNA polymerase) [PF07727.16, score=247.3]; Integrase core domain [PF00665.28, score=20.7]; Integrase core domain [PF13683.8, score=19.0]} {RNA1509_28127} {RNA1310_7509.2} {RNA815_2484.1}

Mlig455_012314 {REF} {Length: 298} {Pfam: Reverse transcriptase (RNA-dependent DNA polymerase) [PF07727.16, score=258.0]; Integrase core domain [PF00665.28, score=20.3]; Integrase core domain [PF13683.8, score=19.0]} {RNA1509_44213} {RNA1310_12401} {RNA815_2484.1}

Mlig455_015441 {REF} {Length: 2669} {Pfam: Reverse transcriptase (RNA-dependent DNA polymerase) [PF07727.16, score=258.0]; Integrase core domain [PF00665.28, score=20.3]; Integrase core domain [PF13683.8, score=19.0]} {RNA1509_28127} {RNA1310_7509.2} {RNA815_2484.1}

Mlig455_051165 {REF} {Length: 559} {Pfam: Reverse transcriptase (RNA-dependent DNA polymerase) [PF07727.16, score=112.3]} {RNA1509_44213} {RNA1310_12401} {RNA815_2484.1}
13. MligTC455_36276 11 0.23 Mlig455_008174, Mlig455_069596

Neo: -

Age: -

 TNKS 0.971 - - - - 0.971 -

Mlig455_008174 {REF} {Length: 3526} {Pfam: Ankyrin repeats (3 copies) [PF12796.9, score=49.0]; Ankyrin repeats (many copies) [PF13637.8, score=41.1]; Ankyrin repeat [PF00023.32, score=37.0]; Ankyrin repeat [PF13606.8, score=36.7]; Ankyrin repeats (many copies) [PF13857.8, score=26.0]; Mab-21 protein [PF03281.16, score=21.3]} {Human: ENSG00000173273, TNKS, tankyrase, [Score=62.4, Expect=5e-09]; ENSG00000285372, AC270292.3, tankyrase, [Score=62.0, Expect=6e-09]; ENSG00000170921, TANC2, tetratricopeptide repeat, ankyrin repeat and coiled-coil containing 2, [Score=62.0, Expect=6e-09]} {Mouse: ENSMUSG00000031529, Tnks, tankyrase, TRF1-interacting ankyrin-related ADP-ribose polymerase, [Score=62.4, Expect=3e-09]; ENSMUSG00000053580, Tanc2, tetratricopeptide repeat, ankyrin repeat and coiled-coil containing 2, [Score=60.8, Expect=4e-09]} {Dmel: FBgn0011747, Ank, Ankyrin, [Score=55.5, Expect=3e-07]} {Smed: dd_Smed_v6_21003_0_1, dd_Smed_v6_21003_0_1, [Score=54.7, Expect=3e-07]} {RNA1310_61630} {RNA815_31743}

Mlig455_069596 {REF} {Length: 3865} {Pfam: Mab-21 protein [PF03281.16, score=25.9]; Ankyrin repeat [PF00023.32, score=20.8]; Ankyrin repeats (3 copies) [PF12796.9, score=19.8]; Ankyrin repeat [PF13606.8, score=18.9]} {RNA1509_19198} {RNA1310_61630} {RNA815_31743}
14. MligTC455_13156 8 0.16 Mlig455_023459

Neo: -

Age: -

 0.967 - - - - 0.967 - Mlig455_023459 {REF} {Length: 3501} {RNA1310_26146} {RNA815_40296}
15. MligTC455_33541 737 15.35 Mlig455_018383

Neo: -

Age: -

Region-enriched R7: 1.927/0.00000

Regeneration-depleted BL: -3.014
Regeneration-depleted R6: -2.524
Regeneration-depleted R4: -2.464

 0.967 - - - - 0.967 - Mlig455_018383 {REF} {Length: 4603} {Pfam: Integrase core domain [PF00665.28, score=38.1]} {Smed: dd_Smed_v6_20599_0_1, dd_Smed_v6_20599_0_1, [Score=91.3, Expect=3e-19]} {RNA1509_22047} {RNA1310_12146, RNA1509_22047} {RNA1509_22047, RNA815_12140}
16. MligTC455_52205 137 2.86 Mlig455_013505

Neo: Irradiation

Age: -

 0.967 - - - - 0.967 - Mlig455_013505 {REF} {Length: 2466} {RNA1310_88037}
17. MligTC455_57738 33 0.69 Mlig455_050734

Neo: -

Age: -

 0.967 - - - - 0.967 - Mlig455_050734 {REF} {Length: 453} {NoTransDecoderORF} {RNA1310_45533}
18. MligTC455_08369 90 1.89 Mlig455_056096

Neo: -

Age: -

 GFI1B 0.965 - - - - 0.965 - Mlig455_056096 {REF} {Length: 1035} {Pfam: Zinc finger, C2H2 type [PF00096.28, score=57.3]; Zinc-finger double domain [PF13465.8, score=52.1]; C2H2-type zinc finger [PF13894.8, score=46.3]} {Human: ENSG00000165702, GFI1B, growth factor independent 1B transcriptional repressor, [Score=118, Expect=2e-30]; ENSG00000162676, GFI1, growth factor independent 1 transcriptional repressor, [Score=116, Expect=2e-29]} {Mouse: ENSMUSG00000026815, Gfi1b, growth factor independent 1B, [Score=119, Expect=5e-31]; ENSMUSG00000029275, Gfi1, growth factor independent 1 transcription repressor, [Score=117, Expect=1e-29]} {Dmel: FBgn0051632, sens-2, senseless-2, [Score=119, Expect=6e-30]} {Celegans: WBGene00003909, pag-3, Zinc finger protein PAG-3, [Score=121, Expect=3e-32]} {Smed: dd_Smed_v6_14824_0_1, dd_Smed_v6_14824_0_1, [Score=122, Expect=2e-32]} {RNA1310_33821.1} {RNA815_26811}
19. MligTC455_00967 18 0.37 Mlig455_070923

Neo: -

Age: -

 0.963 - - - - 0.963 - Mlig455_070923 {REF} {Length: 620} {Mouse: ENSMUSG00000073490, Ifi207, interferon activated gene 207, [Score=58.2, Expect=3e-10]} {RNA1509_11295} {RNA1310_687} {RNA815_55072.1}
20. MligTC455_13810 309 6.44 Mlig455_024887

Neo: -

Age: Down-Down-Up

Region-enriched R7: 3.860/0.00000

Regeneration-downregulated BL: -7.793

Regeneration-depleted BL: -7.793

 0.963 - - - - 0.963 - Mlig455_024887 {REF} {Length: 2641} {Pfam: Zinc finger, C3HC4 type (RING finger) [PF13920.8, score=33.8]; Prokaryotic RING finger family 4 [PF14447.8, score=30.7]} {RNA1310_44589} {RNA815_56600}
21. MligTC455_15712 181 3.76 Mlig455_030495

Neo: -

Age: -

Region-enriched R8: 3.854/0.00430

 PAX6 0.963 - - - - - 0.963 Mlig455_030495 {REF} {Length: 4633} {Pfam: 'Paired box' domain [PF00292.20, score=231.0]; Homeodomain [PF00046.31, score=76.2]; Homeodomain-like domain [PF13384.8, score=21.2]} {Human: ENSG00000007372, PAX6, paired box 6, [RH, Score=259, Expect=5e-80]} {Mouse: ENSMUSG00000027168, Pax6, paired box 6, [RH, Score=258, Expect=2e-78]} {Dmel: FBgn0019650, toy, twin of eyeless, [RH, Score=243, Expect=6e-72]} {Celegans: WBGene00006870, vab-3, MAB-18, [RH, Score=236, Expect=2e-70]} {Smed: dd_Smed_v6_17726_0_1, dd_Smed_v6_17726_0_1, [RH, Score=431, Expect=9e-144]} {RNA1310_37223} {RNA815_52287.1}
22. MligTC455_16825 83 1.73 Mlig455_004646, Mlig455_014982, Mlig455_033046, Mlig455_067354, Mlig455_070980

Neo: -

Age: Down-Up-Down

Region-enriched R3: 4.629/0.04385

 0.963 - - - - 0.963 -

Mlig455_004646 {REF} {Length: 513} {NoTransDecoderORF} {RNA1509_26883} {RNA1310_785} {RNA815_2080}

Mlig455_014982 {REF} {Length: 176} {NoTransDecoderORF} {RNA1509_26883} {RNA1310_785} {RNA815_2080}

Mlig455_033046 {REF} {Length: 514} {NoTransDecoderORF} {RNA1509_26883} {RNA1310_785} {RNA815_2080}

Mlig455_067354 {REF} {Length: 520} {NoTransDecoderORF} {RNA1509_26883} {RNA1310_785} {RNA815_2080}

Mlig455_070980 {REF} {Length: 3436} {RNA1509_26883} {RNA1310_785} {RNA815_2080}
23. MligTC455_11774 25 0.51 Mlig455_037561

Neo: -

Age: -

 0.962 - - - - 0.962 - Mlig455_037561 {REF} {Length: 383} {NoTransDecoderORF} {RNA1509_39469} {RNA1310_72151}
24. MligTC455_21561 8547 178.07 Mlig455_059037

Neo: -

Age: Down-Up-Up

 0.962 - - - - 0.962 - Mlig455_059037 {REF} {Length: 1457} {RNA1509_13504, RNA1509_24058, RNA1509_32240, RNA1509_34298, RNA1509_34451, RNA1509_43966, RNA1509_52806, RNA1509_57877, RNA1509_9238} {RNA1310_40009, RNA1509_13504, RNA1509_24058, RNA1509_32240, RNA1509_34298, RNA1509_34451, RNA1509_43966, RNA1509_52806, RNA1509_57877, RNA1509_9238} {RNA1509_13504, RNA1509_24058, RNA1509_32240, RNA1509_34298, RNA1509_34451, RNA1509_43966, RNA1509_52806, RNA1509_57877, RNA1509_9238, RNA815_19136}
25. MligTC455_25197 36 0.74 Mlig455_059562

Neo: -

Age: -

 KY 0.962 - - - 0.962 - - Mlig455_059562 {REF} {Length: 5559} {Human: ENSG00000174611, KY, kyphoscoliosis peptidase, [Score=77.0, Expect=2e-13]} {Mouse: ENSMUSG00000035606, Ky, kyphoscoliosis peptidase, [Score=79.0, Expect=2e-14]} {Dmel: FBgn0050147, Hil, Hillarin, [Score=78.6, Expect=3e-14]} {Celegans: WBGene00003089, ltd-1, Lim and Transglutaminase Domain; Lim and transglutaminase domain protein, [Score=68.2, Expect=3e-11]} {Smed: dd_Smed_v6_1109_0_1, dd_Smed_v6_1109_0_1, [Score=100, Expect=5e-21]} {RNA1509_6021} {RNA1310_875.1} {RNA815_349}
26. MligTC455_13893 39 0.81 Mlig455_059787

Neo: -

Age: -

 MMEL1 0.961 - - - - 0.961 - Mlig455_059787 {REF} {Length: 994} {Pfam: Peptidase family M13 [PF01431.23, score=122.8]} {Human: ENSG00000142606, MMEL1, membrane metalloendopeptidase like 1, [Score=104, Expect=3e-25]; ENSG00000171551, ECEL1, endothelin converting enzyme like 1, [Score=104, Expect=4e-25]; ENSG00000117298, ECE1, endothelin converting enzyme 1, [Score=104, Expect=3e-25]; ENSG00000277131, MMEL1, membrane metalloendopeptidase like 1, [Score=104, Expect=3e-25]; ENSG00000145194, ECE2, endothelin converting enzyme 2, [Score=101, Expect=4e-24]; ENSG00000284917, EEF1AKMT4-ECE2, EEF1AKMT4-ECE2 readthrough, [Score=100, Expect=5e-24]} {Mouse: ENSMUSG00000058183, Mmel1, membrane metallo-endopeptidase-like 1, [Score=108, Expect=9e-27]; ENSMUSG00000022842, Ece2, endothelin converting enzyme 2, [Score=103, Expect=6e-25]; ENSMUSG00000115293, Gm49333, predicted gene, 49333, [Score=103, Expect=6e-25]} {Dmel: FBgn0038818, Nep4, Neprilysin 4, [Score=126, Expect=4e-33]} {Celegans: WBGene00013926, nep-1, Neprilysin-1, [Score=116, Expect=9e-30]} {Smed: dd_Smed_v6_1910_0_1, dd_Smed_v6_1910_0_1, [Score=102, Expect=6e-25]} {RNA1310_10780} {RNA815_53029}
27. MligTC455_36275 17 0.36 Mlig455_008212

Neo: -

Age: Up-Down-Down

 0.958 - - - - 0.958 - Mlig455_008212 {REF} {Length: 4302} {Pfam: Mab-21 protein [PF03281.16, score=47.1]} {RNA1509_19198} {RNA1310_46396} {RNA815_31743}
28. MligTC455_56024 4 0.09 Mlig455_041715

Neo: -

Age: -

 0.958 - - - - 0.958 - Mlig455_041715 {REF} {Length: 135} {NoTransDecoderORF} {RNA815_65138}
29. MligTC455_17030 15 0.31 Mlig455_001704

Neo: -

Age: -

 0.957 - - - - 0.957 - Mlig455_001704 {REF} {Length: 566} {NoTransDecoderORF}
30. MligTC455_47479 94 1.96 Mlig455_001396

Neo: -

Age: Down-Up-Up

 TRAF4 0.956 - - - - - 0.956 Mlig455_001396 {REF} {Length: 1682} {Human: ENSG00000076604, TRAF4, TNF receptor associated factor 4, [Score=91.7, Expect=2e-20]} {Mouse: ENSMUSG00000017386, Traf4, TNF receptor associated factor 4, [Score=92.4, Expect=6e-21]} {Celegans: WBGene00006612, trf-1, TNF Receptor Associated Factor (TRAF) homolog; TRF-1, [Score=108, Expect=5e-27]} {Smed: dd_Smed_v6_13517_0_1, dd_Smed_v6_13517_0_1, [Score=146, Expect=2e-40]} {RNA1310_27902.1} {RNA815_12300}
31. MligTC455_00073 26 0.54 Mlig455_051511

Neo: -

Age: -

 0.954 - - - - 0.954 - Mlig455_051511 {REF} {Length: 106} {NoTransDecoderORF}
32. MligTC455_37040 16 0.34 Mlig455_027674

Neo: -

Age: -

 0.954 - - - - 0.954 - Mlig455_027674 {REF} {Length: 1088} {RNA1509_12447} {RNA1310_56664} {RNA815_10586}
33. MligTC455_51888 172 3.58 Mlig455_016556

Neo: -

Age: -

Region-enriched R4: 2.612/0.01568

 0.954 - - - - 0.954 - Mlig455_016556 {REF} {Length: 885} {Pfam: Nucleoside 2-deoxyribosyltransferase [PF05014.17, score=23.6]} {Mouse: ENSMUSG00000040658, Dnph1, 2'-deoxynucleoside 5'-phosphate N-hydrolase 1, [Score=47.4, Expect=1e-06]} {RNA1509_18997} {RNA1310_28308} {RNA815_21305}
34. MligTC455_11844 12 0.25 Mlig455_035140

Neo: -

Age: -

 0.953 - - - - 0.953 - Mlig455_035140 {REF} {Length: 439} {NoTransDecoderORF} {RNA1310_130188}
35. MligTC455_22337 3518 73.28 Mlig455_024238

Neo: -

Age: Down-Down-Up

Region-enriched R4: 1.804/0.00234

Regeneration-upregulated TP: 2.173

Regeneration-enriched TP: 2.173

 UBE2D4 0.953 - - - - 0.953 - Mlig455_024238 {REF} {Length: 1295} {Pfam: Ubiquitin-conjugating enzyme [PF00179.28, score=165.0]} {Human: ENSG00000078967, UBE2D4, ubiquitin conjugating enzyme E2 D4 (putative), [Score=182, Expect=8e-59]; ENSG00000131508, UBE2D2, ubiquitin conjugating enzyme E2 D2, [Score=182, Expect=6e-59]; ENSG00000109332, UBE2D3, ubiquitin conjugating enzyme E2 D3, [Score=181, Expect=2e-58]; ENSG00000072401, UBE2D1, ubiquitin conjugating enzyme E2 D1, [Score=179, Expect=1e-57]; ENSG00000170035, UBE2E3, ubiquitin conjugating enzyme E2 E3, [Score=174, Expect=5e-55]} {Mouse: ENSMUSG00000091896, Ube2d2a, ubiquitin-conjugating enzyme E2D 2A, [Score=182, Expect=4e-59]; ENSMUSG00000063447, Ube2d2b, ubiquitin-conjugating enzyme E2D 2B, [Score=181, Expect=2e-58]; ENSMUSG00000078578, Ube2d3, ubiquitin-conjugating enzyme E2D 3, [Score=181, Expect=1e-58]; ENSMUSG00000019927, Ube2d1, ubiquitin-conjugating enzyme E2D 1, [Score=179, Expect=7e-58]; ENSMUSG00000027011, Ube2e3, ubiquitin-conjugating enzyme E2E 3, [Score=174, Expect=3e-55]} {Dmel: FBgn0011217, eff, effete, [Score=182, Expect=3e-59]} {Celegans: WBGene00002344, let-70, Ubiquitin-conjugating enzyme E2 2, [Score=180, Expect=2e-58]} {Smed: dd_Smed_v6_153_0_1, dd_Smed_v6_153_0_1, [Score=180, Expect=1e-58]} {RNA1509_21135, RNA1509_22341, RNA1509_23562, RNA1509_23617, RNA1509_3311, RNA1509_35576, RNA1509_937} {RNA1310_30103.1, RNA1509_21135, RNA1509_22341, RNA1509_23562, RNA1509_23617, RNA1509_3311, RNA1509_35576, RNA1509_937} {RNA1509_21135, RNA1509_22341, RNA1509_23562, RNA1509_23617, RNA1509_3311, RNA1509_35576, RNA1509_937, RNA815_17640.1}
36. MligTC455_35679 40 0.83 Mlig455_038827, Mlig455_038915

Neo: -

Age: Down-Up-Down, logFC(26M/2M)=-0.604

 0.953 - - - - 0.953 -

Mlig455_038827 {REF} {Length: 2109} {TRANSSPLICED} {RNA1509_23775} {RNA1310_13318} {RNA815_5748.1}

Mlig455_038915 {REF} {Length: 2125} {TRANSSPLICED} {RNA1509_23775} {RNA1310_6695.2} {RNA815_5748.1}
37. MligTC455_48285 29 0.61 Mlig455_009043

Neo: -

Age: -

 0.953 - - - - 0.953 - Mlig455_009043 {REF} {Length: 467} {NoTransDecoderORF} {RNA1310_89896}
38. MligTC455_07856 74 1.54 Mlig455_032810

Neo: -

Age: -

Regeneration-enriched R6: 8.022
Regeneration-enriched TP: 7.697
Regeneration-enriched R3: 7.344
Regeneration-enriched R4: 6.104
Regeneration-enriched R5: 5.013

 0.952 - - - - 0.952 - Mlig455_032810 {REF} {Length: 746} {NoTransDecoderORF}
39. MligTC455_50433 6772 141.08 Mlig455_052577, Mlig455_052592

Neo: -

Age: Down-Up-Up

 TNR 0.952 - - - - 0.952 -

Mlig455_052577 {REF} {Length: 2810} {Pfam: Fibrinogen beta and gamma chains, C-terminal globular domain [PF00147.20, score=125.6]; PAN domain [PF00024.28, score=20.6]} {Human: ENSG00000116147, TNR, tenascin R, [Score=109, Expect=4e-26]} {Mouse: ENSMUSG00000015829, Tnr, tenascin R, [Score=110, Expect=2e-26]} {Dmel: FBgn0034160, CG5550, [Score=102, Expect=9e-26]} {Smed: dd_Smed_v6_18326_0_1, dd_Smed_v6_18326_0_1, [Score=98.2, Expect=7e-23]} {RNA1509_15461} {RNA1310_26562} {RNA815_14700}

Mlig455_052592 {REF} {Length: 2429} {Pfam: Fibrinogen beta and gamma chains, C-terminal globular domain [PF00147.20, score=125.6]; PAN domain [PF00024.28, score=20.6]} {Human: ENSG00000116147, TNR, tenascin R, [Score=109, Expect=4e-26]} {Mouse: ENSMUSG00000015829, Tnr, tenascin R, [Score=110, Expect=2e-26]} {Dmel: FBgn0034160, CG5550, [Score=102, Expect=9e-26]} {Smed: dd_Smed_v6_18326_0_1, dd_Smed_v6_18326_0_1, [Score=98.2, Expect=7e-23]} {RNA1509_15461} {RNA1310_26562} {RNA815_14700}
40. MligTC455_09174 199 4.14 Mlig455_042361

Neo: -

Age: Down-Down-Down, logFC(26M/2M)=-0.434

 FANK1 0.951 - - - - 0.951 - Mlig455_042361 {REF} {Length: 3829} {Pfam: Ankyrin repeats (3 copies) [PF12796.9, score=68.0]; Ankyrin repeats (many copies) [PF13857.8, score=62.6]; Ankyrin repeats (many copies) [PF13637.8, score=51.9]; Ankyrin repeat [PF00023.32, score=44.3]; Ankyrin repeat [PF13606.8, score=41.9]} {Human: ENSG00000203780, FANK1, fibronectin type III and ankyrin repeat domains 1, [Score=70.9, Expect=2e-12]} {Mouse: ENSMUSG00000053111, Fank1, fibronectin type 3 and ankyrin repeat domains 1, [Score=65.9, Expect=8e-11]} {Dmel: FBgn0029137, Patsas, [Score=58.2, Expect=3e-08]} {Smed: dd_Smed_v6_2072_0_2, dd_Smed_v6_2072_0_2, [Score=53.9, Expect=5e-07]} {RNA1509_16273} {RNA1310_2568.2} {RNA815_919.1}
41. MligTC455_11595 15 0.31 Mlig455_016360

Neo: -

Age: -

 0.95 - - - - 0.950 - Mlig455_016360 {REF} {Length: 506} {NoTransDecoderORF}
42. MligTC455_36855 3476 72.41 Mlig455_043550

Neo: -

Age: -

Regeneration-downregulated BL: -1.155

Regeneration-depleted BL: -1.155

 0.95 - - - - 0.950 - Mlig455_043550 {REF} {Length: 1775} {Pfam: Death-associated protein [PF15228.8, score=73.8]} {Smed: dd_Smed_v6_946_0_1, dd_Smed_v6_946_0_1, [RH, Score=92.8, Expect=6e-26]} {RNA1509_31846, RNA1509_41599} {RNA1310_19287, RNA1509_31846, RNA1509_41599} {RNA1509_31846, RNA1509_41599, RNA815_7704}
43. MligTC455_40483 1217 25.36 Mlig455_035108, Mlig455_062418

Neo: -

Age: -

Region-enriched R7: 4.651/0.00000
Region-enriched R8: 3.023/0.00321

Regeneration-downregulated BL: -4.738

Regeneration-depleted BL: -4.738

 0.95 - - - - 0.950 -

Mlig455_035108 {REF} {Length: 3155} {Pfam: emp24/gp25L/p24 family/GOLD [PF01105.26, score=43.8]} {RNA1509_49792} {RNA1310_23710} {RNA815_10791}

Mlig455_062418 {REF} {Length: 2815} {Pfam: emp24/gp25L/p24 family/GOLD [PF01105.26, score=43.3]} {RNA1509_49792} {RNA1310_23710, RNA1509_49792} {RNA1509_49792, RNA815_10791}

Refine r cutoff to:    Show

Berezikov Lab - 2020-2021 © ERIBA