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Results for MligTC455_49082

Cluster Total UMI counts Global CPM Transcripts Categories Human homolog Annotation
MligTC455_49082 2593 54.02 Mlig455_020322

Neo: -

Age: -

 NDUFS3 Mlig455_020322 {REF} {Length: 1097} {TRANSSPLICED} {Pfam: Respiratory-chain NADH dehydrogenase, 30 Kd subunit [PF00329.21, score=142.5]} {Human: ENSG00000213619, NDUFS3, NADH:ubiquinone oxidoreductase core subunit S3, [RH, Score=321, Expect=9e-111]; ENSG00000285387, NDUFS3, NADH:ubiquinone oxidoreductase core subunit S3, [RH, Score=321, Expect=9e-111]} {Mouse: ENSMUSG00000005510, Ndufs3, NADH:ubiquinone oxidoreductase core subunit S3, [RH, Score=312, Expect=3e-107]; ENSMUSG00000111727, Ndufs3, NADH:ubiquinone oxidoreductase core subunit S3, [RH, Score=312, Expect=3e-107]} {Dmel: FBgn0266582, ND-30, NADH dehydrogenase (ubiquinone) 30 kDa subunit, [RH, Score=314, Expect=2e-108]} {Celegans: WBGene00020417, nuo-2, NADH Ubiquinone Oxidoreductase, [RH, Score=284, Expect=1e-96]} {Smed: dd_Smed_v6_4275_0_1, dd_Smed_v6_4275_0_1, [RH, Score=303, Expect=4e-104]} {RNA1509_4505} {RNA1310_24535} {RNA815_10675}

Cumulative graph for MligTC455_49082

Region-enriched expression

Region logFC logCPM Pvalue FDR Specificity
RegionR1 -0.553 5.928 0.40155 1.00000
RegionR2 0.06 5.928 0.85280 1.00000
RegionR3 0.606 5.928 0.01852 0.22643
RegionR4 0.68 5.928 0.02244 0.11062
RegionR5 0.428 5.928 0.07549 0.25129
RegionR6 0.254 5.928 0.33615 0.92364
RegionR7 -0.682 5.928 0.05210 0.43924
RegionR8 -0.794 5.928 0.06684 0.49798

Regeneration-enriched expression

Region logFC logCPM PValue FDR Specificity
RegenerationR1 0.592 5.928 0.47379 1.00000
RegenerationR2 -0.269 5.928 0.37403 0.79767
RegenerationR3 -0.016 5.928 0.95949 1.00000
RegenerationR4 -0.008 5.928 0.97931 1.00000
RegenerationR5 -0.067 5.928 0.82251 0.99498
RegenerationR6 0.486 5.928 0.11847 0.42318
RegenerationBL 1.016 5.928 0.00204 0.03661
RegenerationTP 0.904 5.928 0.01795 0.22975


Genes with expression patterns similar to MligTC455_49082

Nr. Cluster Total UMI counts Global CPM Transcripts Categories Human homolog Σ Spearman correlations Int1 Int2 Int3 Reg1 Reg2 Reg3 Annotation
1. MligTC455_49082 2593 54.02 Mlig455_020322

Neo: -

Age: -

 NDUFS3 6 1.000 1.000 1.000 1.000 1.000 1.000 Mlig455_020322 {REF} {Length: 1097} {TRANSSPLICED} {Pfam: Respiratory-chain NADH dehydrogenase, 30 Kd subunit [PF00329.21, score=142.5]} {Human: ENSG00000213619, NDUFS3, NADH:ubiquinone oxidoreductase core subunit S3, [RH, Score=321, Expect=9e-111]; ENSG00000285387, NDUFS3, NADH:ubiquinone oxidoreductase core subunit S3, [RH, Score=321, Expect=9e-111]} {Mouse: ENSMUSG00000005510, Ndufs3, NADH:ubiquinone oxidoreductase core subunit S3, [RH, Score=312, Expect=3e-107]; ENSMUSG00000111727, Ndufs3, NADH:ubiquinone oxidoreductase core subunit S3, [RH, Score=312, Expect=3e-107]} {Dmel: FBgn0266582, ND-30, NADH dehydrogenase (ubiquinone) 30 kDa subunit, [RH, Score=314, Expect=2e-108]} {Celegans: WBGene00020417, nuo-2, NADH Ubiquinone Oxidoreductase, [RH, Score=284, Expect=1e-96]} {Smed: dd_Smed_v6_4275_0_1, dd_Smed_v6_4275_0_1, [RH, Score=303, Expect=4e-104]} {RNA1509_4505} {RNA1310_24535} {RNA815_10675}
2. MligTC455_39351 815 16.99 Mlig455_068114

Neo: -

Age: -

 RAB8B 0.971 - - - - 0.971 - Mlig455_068114 {REF} {Length: 1704} {Pfam: Ras family [PF00071.24, score=174.7]; Ras of Complex, Roc, domain of DAPkinase [PF08477.15, score=108.7]; ADP-ribosylation factor family [PF00025.23, score=55.4]; 50S ribosome-binding GTPase [PF01926.25, score=32.2]; Gtr1/RagA G protein conserved region [PF04670.14, score=27.8]; Signal recognition particle receptor beta subunit [PF09439.12, score=23.5]; RsgA GTPase [PF03193.18, score=22.5]} {Human: ENSG00000166128, RAB8B, RAB8B, member RAS oncogene family, [Score=151, Expect=2e-45]; ENSG00000167461, RAB8A, RAB8A, member RAS oncogene family, [Score=146, Expect=1e-43]; ENSG00000172794, RAB37, RAB37, member RAS oncogene family, [Score=145, Expect=6e-43]; ENSG00000285641, AL358472.6, novel protein, [Score=145, Expect=3e-43]; ENSG00000143545, RAB13, RAB13, member RAS oncogene family, [Score=145, Expect=3e-43]} {Mouse: ENSMUSG00000036943, Rab8b, RAB8B, member RAS oncogene family, [Score=151, Expect=1e-45]; ENSMUSG00000003037, Rab8a, RAB8A, member RAS oncogene family, [Score=149, Expect=1e-44]; ENSMUSG00000027935, Rab13, RAB13, member RAS oncogene family, [Score=148, Expect=2e-44]; ENSMUSG00000020732, Rab37, RAB37, member RAS oncogene family, [Score=144, Expect=2e-42]; ENSMUSG00000079657, Rab26, RAB26, member RAS oncogene family, [Score=144, Expect=3e-42]} {Dmel: FBgn0262518, Rab8, [Score=147, Expect=6e-44]} {Celegans: WBGene00004272, rab-8, RAB family; Rab8, [Score=147, Expect=2e-44]} {Smed: dd_Smed_v6_9518_0_2, dd_Smed_v6_9518_0_2, [RH, Score=167, Expect=6e-52]} {RNA1509_18167, RNA1509_19859} {RNA1310_37116, RNA1509_18167, RNA1509_19859} {RNA1509_18167, RNA1509_19859, RNA815_17007}
3. MligTC455_21712 6583 137.15 Mlig455_061536

Neo: Int S/G2/M

Age: logFC(26M/2M)=0.260

 SERBP1 0.965 - - - 0.965 - - Mlig455_061536 {REF} {Length: 2886} {TRANSSPLICED} {Pfam: Hyaluronan / mRNA binding family [PF04774.17, score=74.9]; Intracellular hyaluronan-binding protein 4 N-terminal [PF16174.7, score=45.3]} {Human: ENSG00000142864, SERBP1, SERPINE1 mRNA binding protein 1, [RH, Score=62.0, Expect=8e-10]} {Mouse: ENSMUSG00000036371, Serbp1, serpine1 mRNA binding protein 1, [RH, Score=63.2, Expect=3e-10]} {Dmel: FBgn0046214, vig2, [RH, Score=82.0, Expect=1e-16]} {Smed: dd_Smed_v6_697_0_1, dd_Smed_v6_697_0_1, [RH, Score=73.9, Expect=2e-14]} {RNA1509_225, RNA1509_7006} {RNA1310_11680.1, RNA1509_225, RNA1509_7006} {RNA1509_225, RNA1509_7006, RNA815_4163.1}
4. MligTC455_42464 2032 42.34 Mlig455_050103, Mlig455_054011

Neo: Int S/G2/M

Age: Down-Up-Up, logFC(26M/2M)=0.342

Region-enriched R4: 1.128/0.00501

 MALSU1 0.964 - - - 0.964 - -

Mlig455_050103 {REF} {Length: 1000} {TRANSSPLICED} {Pfam: Ribosomal silencing factor during starvation [PF02410.17, score=49.8]} {Human: ENSG00000156928, MALSU1, mitochondrial assembly of ribosomal large subunit 1, [RH, Score=68.2, Expect=7e-13]} {Mouse: ENSMUSG00000029815, Malsu1, mitochondrial assembly of ribosomal large subunit 1, [RH, Score=66.6, Expect=1e-12]} {Dmel: FBgn0029514, 312, [RH, Score=103, Expect=3e-26]} {Smed: dd_Smed_v6_6821_0_1, dd_Smed_v6_6821_0_1, [RH, Score=85.9, Expect=6e-20]} {RNA1509_12171} {RNA1310_35117} {RNA815_16541}

Mlig455_054011 {REF} {Length: 1009} {TRANSSPLICED} {Pfam: Ribosomal silencing factor during starvation [PF02410.17, score=48.5]} {Human: ENSG00000156928, MALSU1, mitochondrial assembly of ribosomal large subunit 1, [RH, Score=68.2, Expect=6e-13]} {Mouse: ENSMUSG00000029815, Malsu1, mitochondrial assembly of ribosomal large subunit 1, [RH, Score=65.9, Expect=3e-12]} {Dmel: FBgn0029514, 312, [RH, Score=103, Expect=3e-26]} {Smed: dd_Smed_v6_6821_0_1, dd_Smed_v6_6821_0_1, [RH, Score=85.1, Expect=1e-19]} {RNA1509_12171} {RNA1310_35117, RNA1509_12171} {RNA1509_12171, RNA815_16541}
5. MligTC455_38691 662 13.8 Mlig455_011325

Neo: -

Age: -

 CTR9 0.959 - - - 0.959 - - Mlig455_011325 {REF} {Length: 4001} {TRANSSPLICED} {Pfam: Tetratricopeptide repeat [PF00515.30, score=132.0]; Tetratricopeptide repeat [PF07719.19, score=126.5]; Tetratricopeptide repeat [PF13181.8, score=107.0]; Tetratricopeptide repeat [PF14559.8, score=105.8]; Tetratricopeptide repeat [PF13424.8, score=102.2]; Tetratricopeptide repeat [PF13428.8, score=89.3]; Tetratricopeptide repeat [PF13431.8, score=79.1]; Tetratricopeptide repeat [PF13432.8, score=77.7]; TPR repeat [PF13414.8, score=68.0]; Tetratricopeptide repeat [PF13176.8, score=60.8]; Tetratricopeptide repeat [PF13374.8, score=51.0]; Tetratricopeptide repeat [PF13174.8, score=41.5]; Soluble NSF attachment protein, SNAP [PF14938.8, score=40.0]; Anaphase-promoting complex, cyclosome, subunit 3 [PF12895.9, score=39.3]; Tetratricopeptide repeat [PF13371.8, score=26.1]; Tetratricopeptide repeat [PF07721.16, score=25.8]} {Human: ENSG00000198730, CTR9, CTR9 homolog, Paf1/RNA polymerase II complex component, [RH, Score=955, Expect=0.0]} {Mouse: ENSMUSG00000005609, Ctr9, CTR9 homolog, Paf1/RNA polymerase II complex component, [RH, Score=957, Expect=0.0]} {Dmel: FBgn0035205, Ctr9, [RH, Score=893, Expect=0.0]} {Celegans: WBGene00007184, ctr-9, RNA polymerase-associated protein CTR9, [RH, Score=539, Expect=4e-173]} {Smed: dd_Smed_v6_2695_0_1, dd_Smed_v6_2695_0_1, [RH, Score=884, Expect=0.0]} {RNA1509_3063} {RNA1310_2272.1} {RNA815_1958}
6. MligTC455_21711 6648 138.51 Mlig455_046285

Neo: -

Age: logFC(26M/2M)=0.517

 SERBP1 0.957 - - - 0.957 - - Mlig455_046285 {REF} {Length: 3531} {Pfam: Hyaluronan / mRNA binding family [PF04774.17, score=74.9]; Intracellular hyaluronan-binding protein 4 N-terminal [PF16174.7, score=45.2]} {Human: ENSG00000142864, SERBP1, SERPINE1 mRNA binding protein 1, [RH, Score=62.0, Expect=1e-09]} {Mouse: ENSMUSG00000036371, Serbp1, serpine1 mRNA binding protein 1, [RH, Score=63.2, Expect=3e-10]} {Dmel: FBgn0046214, vig2, [RH, Score=82.0, Expect=1e-16]} {Smed: dd_Smed_v6_697_0_1, dd_Smed_v6_697_0_1, [RH, Score=73.9, Expect=2e-14]} {RNA1509_36959, RNA1509_7006} {RNA1310_11680.1, RNA1509_36959} {RNA1509_36959, RNA815_4163.1}
7. MligTC455_23111 1282 26.7 Mlig455_015089

Neo: -

Age: Up-Down-Up

 EIF4G3 0.954 - - - 0.954 - - Mlig455_015089 {REF} {Length: 6175} {Pfam: MIF4G domain [PF02854.21, score=100.7]; MA3 domain [PF02847.19, score=22.5]} {Human: ENSG00000075151, EIF4G3, eukaryotic translation initiation factor 4 gamma 3, [Score=301, Expect=4e-82]; ENSG00000114867, EIF4G1, eukaryotic translation initiation factor 4 gamma 1, [Score=292, Expect=2e-79]} {Mouse: ENSMUSG00000028760, Eif4g3, eukaryotic translation initiation factor 4 gamma, 3, [Score=309, Expect=9e-85]} {Dmel: FBgn0023213, eIF4G1, eukaryotic translation initiation factor 4G1, [RH, Score=149, Expect=1e-35]} {Smed: dd_Smed_v6_10618_0_1, dd_Smed_v6_10618_0_1, [Score=210, Expect=2e-59]} {RNA1509_828} {RNA1310_788.1} {RNA815_583}
8. MligTC455_07278 1226 25.54 Mlig455_019894

Neo: Int S/G2/M

Age: Down-Up-Down

Regeneration-upregulated BL: 1.628

Regeneration-enriched BL: 1.628

 0.953 - - - 0.953 - - Mlig455_019894 {REF} {Length: 1637} {Pfam: Zinc finger C-x8-C-x5-C-x3-H type (and similar) [PF00642.26, score=19.7]; CCCH-type zinc finger [PF18044.3, score=19.3]} {RNA1509_3489} {RNA1310_2848.1} {RNA815_4953.1}

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