Data search
Results for MligTC455_38691
| Cluster | Total UMI counts | Global CPM | Transcripts | Categories | Human homolog | Annotation |
|---|---|---|---|---|---|---|
| MligTC455_38691 | 662 | 13.80 | Mlig455_011325 | Neo: - Age: - |
CTR9 | Mlig455_011325 {REF} {Length: 4001} {TRANSSPLICED} {Pfam: Tetratricopeptide repeat [PF00515.30, score=132.0]; Tetratricopeptide repeat [PF07719.19, score=126.5]; Tetratricopeptide repeat [PF13181.8, score=107.0]; Tetratricopeptide repeat [PF14559.8, score=105.8]; Tetratricopeptide repeat [PF13424.8, score=102.2]; Tetratricopeptide repeat [PF13428.8, score=89.3]; Tetratricopeptide repeat [PF13431.8, score=79.1]; Tetratricopeptide repeat [PF13432.8, score=77.7]; TPR repeat [PF13414.8, score=68.0]; Tetratricopeptide repeat [PF13176.8, score=60.8]; Tetratricopeptide repeat [PF13374.8, score=51.0]; Tetratricopeptide repeat [PF13174.8, score=41.5]; Soluble NSF attachment protein, SNAP [PF14938.8, score=40.0]; Anaphase-promoting complex, cyclosome, subunit 3 [PF12895.9, score=39.3]; Tetratricopeptide repeat [PF13371.8, score=26.1]; Tetratricopeptide repeat [PF07721.16, score=25.8]} {Human: ENSG00000198730, CTR9, CTR9 homolog, Paf1/RNA polymerase II complex component, [RH, Score=955, Expect=0.0]} {Mouse: ENSMUSG00000005609, Ctr9, CTR9 homolog, Paf1/RNA polymerase II complex component, [RH, Score=957, Expect=0.0]} {Dmel: FBgn0035205, Ctr9, [RH, Score=893, Expect=0.0]} {Celegans: WBGene00007184, ctr-9, RNA polymerase-associated protein CTR9, [RH, Score=539, Expect=4e-173]} {Smed: dd_Smed_v6_2695_0_1, dd_Smed_v6_2695_0_1, [RH, Score=884, Expect=0.0]} {RNA1509_3063} {RNA1310_2272.1} {RNA815_1958} |
Cumulative graph for MligTC455_38691
Region-enriched expression
| Region | logFC | logCPM | Pvalue | FDR | Specificity |
|---|---|---|---|---|---|
| RegionR1 | -0.586 | 4.12 | 0.67866 | 1.00000 | |
| RegionR2 | -0.603 | 4.12 | 0.23800 | 0.61193 | |
| RegionR3 | -0.374 | 4.12 | 0.38616 | 0.91794 | |
| RegionR4 | 0.615 | 4.12 | 0.18813 | 0.46225 | |
| RegionR5 | 0.142 | 4.12 | 0.70718 | 1.00000 | |
| RegionR6 | -0.041 | 4.12 | 0.92431 | 1.00000 | |
| RegionR7 | 0.421 | 4.12 | 0.42888 | 1.00000 | |
| RegionR8 | 0.428 | 4.12 | 0.53916 | 1.00000 |
Regeneration-enriched expression
| Region | logFC | logCPM | PValue | FDR | Specificity |
|---|---|---|---|---|---|
| RegenerationR1 | -1.698 | 4.12 | 0.48331 | 1.00000 | |
| RegenerationR2 | 0.199 | 4.12 | 0.60927 | 0.91938 | |
| RegenerationR3 | 0.479 | 4.12 | 0.27411 | 0.70849 | |
| RegenerationR4 | 0.118 | 4.12 | 0.78217 | 0.98164 | |
| RegenerationR5 | 0.353 | 4.12 | 0.37183 | 0.78136 | |
| RegenerationR6 | 0.532 | 4.12 | 0.21233 | 0.55607 | |
| RegenerationBL | 0.317 | 4.12 | 0.52008 | 0.88199 | |
| RegenerationTP | -0.586 | 4.12 | 0.31683 | 0.76155 |
Genes with expression patterns similar to MligTC455_38691
| Nr. | Cluster | Total UMI counts | Global CPM | Transcripts | Categories | Human homolog | Σ Spearman correlations | Int1 | Int2 | Int3 | Reg1 | Reg2 | Reg3 | Annotation |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1. | MligTC455_38691 | 662 | 13.8 | Mlig455_011325 | Neo: - Age: - |
CTR9 | 6 | 1.000 | 1.000 | 1.000 | 1.000 | 1.000 | 1.000 | Mlig455_011325 {REF} {Length: 4001} {TRANSSPLICED} {Pfam: Tetratricopeptide repeat [PF00515.30, score=132.0]; Tetratricopeptide repeat [PF07719.19, score=126.5]; Tetratricopeptide repeat [PF13181.8, score=107.0]; Tetratricopeptide repeat [PF14559.8, score=105.8]; Tetratricopeptide repeat [PF13424.8, score=102.2]; Tetratricopeptide repeat [PF13428.8, score=89.3]; Tetratricopeptide repeat [PF13431.8, score=79.1]; Tetratricopeptide repeat [PF13432.8, score=77.7]; TPR repeat [PF13414.8, score=68.0]; Tetratricopeptide repeat [PF13176.8, score=60.8]; Tetratricopeptide repeat [PF13374.8, score=51.0]; Tetratricopeptide repeat [PF13174.8, score=41.5]; Soluble NSF attachment protein, SNAP [PF14938.8, score=40.0]; Anaphase-promoting complex, cyclosome, subunit 3 [PF12895.9, score=39.3]; Tetratricopeptide repeat [PF13371.8, score=26.1]; Tetratricopeptide repeat [PF07721.16, score=25.8]} {Human: ENSG00000198730, CTR9, CTR9 homolog, Paf1/RNA polymerase II complex component, [RH, Score=955, Expect=0.0]} {Mouse: ENSMUSG00000005609, Ctr9, CTR9 homolog, Paf1/RNA polymerase II complex component, [RH, Score=957, Expect=0.0]} {Dmel: FBgn0035205, Ctr9, [RH, Score=893, Expect=0.0]} {Celegans: WBGene00007184, ctr-9, RNA polymerase-associated protein CTR9, [RH, Score=539, Expect=4e-173]} {Smed: dd_Smed_v6_2695_0_1, dd_Smed_v6_2695_0_1, [RH, Score=884, Expect=0.0]} {RNA1509_3063} {RNA1310_2272.1} {RNA815_1958} |
| 2. | MligTC455_20133 | 614 | 12.79 | Mlig455_033844 | Neo: - Age: - |
ADAM10 | 1.795 | - | - | - | - | 0.837 | 0.958 | Mlig455_033844 {REF} {Length: 4108} {TRANSSPLICED} {Pfam: Metallo-peptidase family M12B Reprolysin-like [PF13574.8, score=114.0]; Metallo-peptidase family M12 [PF13688.8, score=91.7]; Metallo-peptidase family M12B Reprolysin-like [PF13582.8, score=69.0]; Disintegrin [PF00200.25, score=52.8]; Metallo-peptidase family M12B Reprolysin-like [PF13583.8, score=32.9]; Reprolysin family propeptide [PF01562.21, score=23.5]; Reprolysin (M12B) family zinc metalloprotease [PF01421.21, score=22.7]} {Human: ENSG00000137845, ADAM10, ADAM metallopeptidase domain 10, [Score=423, Expect=4e-136]} {Mouse: ENSMUSG00000054693, Adam10, a disintegrin and metallopeptidase domain 10, [Score=414, Expect=1e-132]} {Dmel: FBgn0259984, kuz, kuzbanian, [Score=402, Expect=5e-125]} {Celegans: WBGene00006324, sup-17, ADAM 10; SUPpressor, [Score=420, Expect=3e-133]} {Smed: dd_Smed_v6_2341_0_2, dd_Smed_v6_2341_0_2, [Score=475, Expect=3e-155]} {RNA1509_7004} {RNA1310_3561, RNA1509_7004} {RNA1509_7004, RNA815_3272.1} |
| 3. | MligTC455_43569 | 435 | 9.06 | Mlig455_028984 | Neo: - Age: - |
ASTE1 | 1.781 | - | - | - | 0.825 | 0.956 | - | Mlig455_028984 {REF} {Length: 2681} {Pfam: XPG domain containing [PF12813.9, score=62.1]} {Human: ENSG00000034533, ASTE1, asteroid homolog 1, [Score=112, Expect=7e-25]} {Mouse: ENSMUSG00000032567, Aste1, asteroid homolog 1, [Score=111, Expect=9e-25]} {Dmel: FBgn0015905, ast, asteroid, [Score=88.6, Expect=1e-17]} {Smed: dd_Smed_v6_12690_0_1, dd_Smed_v6_12690_0_1, [Score=141, Expect=6e-35]} {RNA1509_49240} {RNA1310_10993.1} {RNA815_4468.1} |
| 4. | MligTC455_26068 | 1801 | 37.51 | Mlig455_031775, Mlig455_054709 | Neo: - Age: - Region-enriched R4: 1.187/0.00572 Regeneration-upregulated BL: 1.800 Regeneration-enriched BL: 1.800 |
CARM1 | 1.681 | - | - | - | 0.955 | 0.726 | - | Mlig455_031775 {REF} {Length: 3398} {Pfam: Methyltransferase domain [PF13649.8, score=32.0]; Ribosomal protein L11 methyltransferase (PrmA) [PF06325.15, score=30.4]; PRMT5 arginine-N-methyltransferase [PF05185.18, score=30.0]; Methyltransferase small domain [PF05175.16, score=28.5]; Methyltransferase domain [PF08241.14, score=24.3]; Protein of unknown function (DUF1698) [PF08003.13, score=23.2]} {Human: ENSG00000142453, CARM1, coactivator associated arginine methyltransferase 1, [RH, Score=497, Expect=2e-170]} {Mouse: ENSMUSG00000032185, Carm1, coactivator-associated arginine methyltransferase 1, [RH, Score=495, Expect=4e-170]} {Dmel: FBgn0037770, Art4, Arginine methyltransferase 4, [RH, Score=497, Expect=8e-172]} {Celegans: WBGene00013766, prmt-1, Protein arginine N-methyltransferase 1, [Score=178, Expect=8e-51]} {Smed: dd_Smed_v6_6133_0_1, dd_Smed_v6_6133_0_1, [RH, Score=508, Expect=6e-176]} {RNA1509_8876} {RNA1310_6296} {RNA815_5121} Mlig455_054709 {REF} {Length: 5653} {Pfam: DDE superfamily endonuclease [PF13358.8, score=58.3]; Methyltransferase domain [PF13649.8, score=31.6]; Ribosomal protein L11 methyltransferase (PrmA) [PF06325.15, score=29.4]; PRMT5 arginine-N-methyltransferase [PF05185.18, score=28.9]; Methyltransferase small domain [PF05175.16, score=27.3]; Methyltransferase domain [PF08241.14, score=25.3]; Protein of unknown function (DUF1698) [PF08003.13, score=21.7]} {Human: ENSG00000142453, CARM1, coactivator associated arginine methyltransferase 1, [RH, Score=498, Expect=1e-165]} {Mouse: ENSMUSG00000032185, Carm1, coactivator-associated arginine methyltransferase 1, [RH, Score=498, Expect=1e-165]} {Dmel: FBgn0037770, Art4, Arginine methyltransferase 4, [RH, Score=503, Expect=4e-169]} {Celegans: WBGene00013766, prmt-1, Protein arginine N-methyltransferase 1, [Score=177, Expect=6e-49]} {Smed: dd_Smed_v6_6133_0_1, dd_Smed_v6_6133_0_1, [RH, Score=513, Expect=2e-172]} {RNA1509_8876} {RNA1310_6296} {RNA815_134.1} |
| 5. | MligTC455_25027 | 17944 | 373.84 | Mlig455_034026 | Neo: Int S/G2/M Age: logFC(26M/2M)=0.226 |
ATP5F1A | 1.656 | - | - | - | 0.953 | 0.703 | - | Mlig455_034026 {REF} {Length: 2292} {TRANSSPLICED} {Pfam: ATP synthase alpha/beta family, nucleotide-binding domain [PF00006.27, score=245.7]; ATP synthase alpha/beta chain, C terminal domain [PF00306.29, score=158.4]; ATP synthase alpha/beta family, beta-barrel domain [PF02874.25, score=67.4]} {Human: ENSG00000152234, ATP5F1A, ATP synthase F1 subunit alpha, [RH, Score=880, Expect=0.0]} {Mouse: ENSMUSG00000116276, Atp5a1, ATP synthase, H+ transporting, mitochondrial F1 complex, alpha subunit 1, [RH, Score=882, Expect=0.0]; ENSMUSG00000025428, Atp5a1, ATP synthase, H+ transporting, mitochondrial F1 complex, alpha subunit 1, [RH, Score=882, Expect=0.0]} {Dmel: FBgn0011211, blw, bellwether, [RH, Score=877, Expect=0.0]} {Celegans: WBGene00010419, H28O16.1, ATP synthase subunit alpha, mitochondrial, [RH, Score=850, Expect=0.0]} {Smed: dd_Smed_v6_731_0_1, dd_Smed_v6_731_0_1, [RH, Score=903, Expect=0.0]} {RNA1509_102} {RNA1310_10282.1, RNA1509_102} {RNA1509_102, RNA815_2316} |
| 6. | MligTC455_20913 | 14492 | 301.92 | Mlig455_002399, Mlig455_054651 | Neo: - |
RPS12 | 0.978 | - | - | - | 0.978 | - | - | Mlig455_002399 {REF} {Length: 786} {TRANSSPLICED} {Pfam: Ribosomal protein L7Ae/L30e/S12e/Gadd45 family [PF01248.28, score=96.7]} {Human: ENSG00000112306, RPS12, ribosomal protein S12, [Score=160, Expect=3e-51]} {Mouse: ENSMUSG00000061983, Rps12, ribosomal protein S12, [Score=160, Expect=2e-51]; ENSMUSG00000067038, Rps12-ps3, ribosomal protein S12, pseudogene 3, [Score=160, Expect=2e-51]} {Dmel: FBgn0260441, RpS12, Ribosomal protein S12, [Score=142, Expect=2e-44]} {Celegans: WBGene00004481, rps-12, 40S ribosomal protein S12, [Score=120, Expect=5e-36]} {Smed: dd_Smed_v6_94979_0_1, dd_Smed_v6_94979_0_1, [Score=153, Expect=3e-49]} {RNA1509_1190} {RNA1310_46273, RNA1509_1190} {RNA1509_1190, RNA815_22452.1} Mlig455_054651 {REF} {Length: 758} {TRANSSPLICED} {Pfam: Ribosomal protein L7Ae/L30e/S12e/Gadd45 family [PF01248.28, score=96.7]} {Human: ENSG00000112306, RPS12, ribosomal protein S12, [Score=160, Expect=3e-51]} {Mouse: ENSMUSG00000067038, Rps12-ps3, ribosomal protein S12, pseudogene 3, [Score=160, Expect=2e-51]; ENSMUSG00000061983, Rps12, ribosomal protein S12, [Score=160, Expect=2e-51]} {Dmel: FBgn0260441, RpS12, Ribosomal protein S12, [Score=142, Expect=2e-44]} {Celegans: WBGene00004481, rps-12, 40S ribosomal protein S12, [Score=121, Expect=3e-36]} {Smed: dd_Smed_v6_94979_0_1, dd_Smed_v6_94979_0_1, [Score=153, Expect=3e-49]} {RNA1509_44047, RNA1509_4432} {RNA1310_49080, RNA1509_44047, RNA1509_4432} {RNA1509_44047, RNA1509_4432, RNA815_22452.2} |
| 7. | MligTC455_51409 | 193 | 4.02 | Mlig455_057547 | Neo: Int S/G2/M Age: Down-Up-Up |
MAFK | 0.977 | - | - | - | - | 0.977 | - | Mlig455_057547 {REF} {Length: 1237} {TRANSSPLICED} {Pfam: bZIP Maf transcription factor [PF03131.19, score=51.1]} {Human: ENSG00000198517, MAFK, MAF bZIP transcription factor K, [Score=48.5, Expect=4e-07]; ENSG00000185022, MAFF, MAF bZIP transcription factor F, [Score=47.8, Expect=1e-06]} {Mouse: ENSMUSG00000018143, Mafk, v-maf musculoaponeurotic fibrosarcoma oncogene family, protein K (avian), [Score=48.9, Expect=2e-07]} {Dmel: FBgn0034534, maf-S, [Score=47.0, Expect=6e-07]} {RNA1509_32032} {RNA1310_36441} {RNA815_27710} |
| 8. | MligTC455_29312 | 242 | 5.04 | Mlig455_024665 | Neo: - Age: - Region-enriched R3: 2.630/0.00156 |
SLC22A6 | 0.963 | - | - | - | - | 0.963 | - | Mlig455_024665 {REF} {Length: 4159} {Pfam: Sugar (and other) transporter [PF00083.26, score=112.3]; Major Facilitator Superfamily [PF07690.18, score=83.6]} {Human: ENSG00000197901, SLC22A6, solute carrier family 22 member 6, [Score=184, Expect=1e-50]} {Mouse: ENSMUSG00000024650, Slc22a6, solute carrier family 22 (organic anion transporter), member 6, [Score=174, Expect=4e-47]; ENSMUSG00000074028, Slc22a13, solute carrier family 22 (organic cation transporter), member 13, [Score=172, Expect=3e-46]; ENSMUSG00000063652, Slc22a21, solute carrier family 22 (organic cation transporter), member 21, [Score=170, Expect=2e-45]} {Dmel: FBgn0019952, Orct, Organic cation transporter, [Score=176, Expect=8e-48]} {Celegans: WBGene00003842, oct-1, Organic cation transporter 1, [Score=139, Expect=6e-35]} {Smed: dd_Smed_v6_1159_0_1, dd_Smed_v6_1159_0_1, [Score=132, Expect=7e-33]} {RNA1509_13135, RNA1509_47373, RNA1509_50772} {RNA1310_6359.1, RNA1509_13135, RNA1509_47373, RNA1509_50772} {RNA1509_13135, RNA1509_47373, RNA1509_50772, RNA815_24636} |
| 9. | MligTC455_50916 | 879 | 18.31 | Mlig455_028663, Mlig455_028694 | Neo: Irradiation Age: - |
0.961 | - | - | - | 0.961 | - | - | Mlig455_028663 {REF} {Length: 2888} {Pfam: Microtubule associated protein (MAP65/ASE1 family) [PF03999.14, score=97.7]} {Smed: dd_Smed_v6_12013_0_1, dd_Smed_v6_12013_0_1, [Score=64.7, Expect=7e-11]} {RNA1509_8219} {RNA1310_6966.1} {RNA815_1972.1} Mlig455_028694 {REF} {Length: 2675} {Pfam: Microtubule associated protein (MAP65/ASE1 family) [PF03999.14, score=95.3]} {Smed: dd_Smed_v6_12013_0_1, dd_Smed_v6_12013_0_1, [Score=66.2, Expect=2e-11]} {RNA1509_8219} {RNA1310_1428.1, RNA1509_8219} {RNA1509_8219, RNA815_1972.1} |
|
| 10. | MligTC455_49082 | 2593 | 54.02 | Mlig455_020322 | Neo: - Age: - |
NDUFS3 | 0.959 | - | - | - | 0.959 | - | - | Mlig455_020322 {REF} {Length: 1097} {TRANSSPLICED} {Pfam: Respiratory-chain NADH dehydrogenase, 30 Kd subunit [PF00329.21, score=142.5]} {Human: ENSG00000213619, NDUFS3, NADH:ubiquinone oxidoreductase core subunit S3, [RH, Score=321, Expect=9e-111]; ENSG00000285387, NDUFS3, NADH:ubiquinone oxidoreductase core subunit S3, [RH, Score=321, Expect=9e-111]} {Mouse: ENSMUSG00000005510, Ndufs3, NADH:ubiquinone oxidoreductase core subunit S3, [RH, Score=312, Expect=3e-107]; ENSMUSG00000111727, Ndufs3, NADH:ubiquinone oxidoreductase core subunit S3, [RH, Score=312, Expect=3e-107]} {Dmel: FBgn0266582, ND-30, NADH dehydrogenase (ubiquinone) 30 kDa subunit, [RH, Score=314, Expect=2e-108]} {Celegans: WBGene00020417, nuo-2, NADH Ubiquinone Oxidoreductase, [RH, Score=284, Expect=1e-96]} {Smed: dd_Smed_v6_4275_0_1, dd_Smed_v6_4275_0_1, [RH, Score=303, Expect=4e-104]} {RNA1509_4505} {RNA1310_24535} {RNA815_10675} |
| 11. | MligTC455_36293 | 48 | 1 | Mlig455_047760 | Neo: - Age: Down-Down-Up |
KREMEN1 | 0.956 | - | - | - | - | 0.956 | - | Mlig455_047760 {REF} {Length: 3425} {Pfam: WSC domain [PF01822.21, score=50.5]; PAN domain [PF00024.28, score=27.0]} {Human: ENSG00000183762, KREMEN1, kringle containing transmembrane protein 1, [Score=47.8, Expect=5e-06]} {RNA1310_30901} {RNA815_63880} |
| 12. | MligTC455_45481 | 213 | 4.44 | Mlig455_041828 | Neo: - Age: - Region-enriched R5: 2.099/0.00443 |
WDR4 | 0.956 | - | - | - | - | 0.956 | - | Mlig455_041828 {REF} {Length: 2436} {TRANSSPLICED} {Human: ENSG00000160193, WDR4, WD repeat domain 4, [Score=73.2, Expect=2e-13]} {Mouse: ENSMUSG00000024037, Wdr4, WD repeat domain 4, [RH, Score=73.6, Expect=1e-13]} {Smed: dd_Smed_v6_11186_0_1, dd_Smed_v6_11186_0_1, [Score=80.9, Expect=1e-16]} {RNA1310_24007} {RNA815_9753} |
| 13. | MligTC455_21712 | 6583 | 137.15 | Mlig455_061536 | Neo: Int S/G2/M Age: logFC(26M/2M)=0.260 |
SERBP1 | 0.953 | - | - | - | 0.953 | - | - | Mlig455_061536 {REF} {Length: 2886} {TRANSSPLICED} {Pfam: Hyaluronan / mRNA binding family [PF04774.17, score=74.9]; Intracellular hyaluronan-binding protein 4 N-terminal [PF16174.7, score=45.3]} {Human: ENSG00000142864, SERBP1, SERPINE1 mRNA binding protein 1, [RH, Score=62.0, Expect=8e-10]} {Mouse: ENSMUSG00000036371, Serbp1, serpine1 mRNA binding protein 1, [RH, Score=63.2, Expect=3e-10]} {Dmel: FBgn0046214, vig2, [RH, Score=82.0, Expect=1e-16]} {Smed: dd_Smed_v6_697_0_1, dd_Smed_v6_697_0_1, [RH, Score=73.9, Expect=2e-14]} {RNA1509_225, RNA1509_7006} {RNA1310_11680.1, RNA1509_225, RNA1509_7006} {RNA1509_225, RNA1509_7006, RNA815_4163.1} |
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