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Results for MligTC455_49109

Cluster Total UMI counts Global CPM Transcripts Categories Human homolog Annotation
MligTC455_49109 146 3.04 Mlig455_006530

Neo: -

Age: Down-Up-Down, logFC(26M/2M)=-0.392

 Mlig455_006530 {REF} {Length: 1458} {TRANSSPLICED} {Pfam: Transmembrane family 220, helix [PF15071.8, score=62.3]} {Mouse: ENSMUSG00000050270, Tmem220, transmembrane protein 220, [Score=62.4, Expect=6e-12]} {RNA1509_42585} {RNA1310_39687, RNA1509_42585} {RNA1509_42585, RNA815_19504}

Cumulative graph for MligTC455_49109

Region-enriched expression

Region logFC logCPM Pvalue FDR Specificity
RegionR1 3.151 2.397 0.03807 0.47787
RegionR2 0.388 2.397 0.60086 0.95109
RegionR3 0.171 2.397 0.70032 1.00000
RegionR4 1.232 2.397 0.14479 0.39062
RegionR5 0.592 2.397 0.37923 0.73327
RegionR6 -0.377 2.397 0.91339 1.00000
RegionR7 0.929 2.397 0.31496 0.94964
RegionR8 -6.084 2.397 0.02192 0.28876

Regeneration-enriched expression

Region logFC logCPM PValue FDR Specificity
RegenerationR1 -6.64 2.397 0.14180 0.88056
RegenerationR2 -0.035 2.397 0.95190 1.00000
RegenerationR3 0.213 2.397 0.74199 0.96149
RegenerationR4 -0.48 2.397 0.45775 0.84612
RegenerationR5 -0.369 2.397 0.49916 0.85795
RegenerationR6 0.293 2.397 0.69907 0.92387
RegenerationBL -0.296 2.397 0.86933 1.00000
RegenerationTP 1.68 2.397 0.42735 0.85059


Genes with expression patterns similar to MligTC455_49109

Nr. Cluster Total UMI counts Global CPM Transcripts Categories Human homolog Σ Spearman correlations Int1 Int2 Int3 Reg1 Reg2 Reg3 Annotation
1. MligTC455_49109 146 3.04 Mlig455_006530

Neo: -

Age: Down-Up-Down, logFC(26M/2M)=-0.392

 6 1.000 1.000 1.000 1.000 1.000 1.000 Mlig455_006530 {REF} {Length: 1458} {TRANSSPLICED} {Pfam: Transmembrane family 220, helix [PF15071.8, score=62.3]} {Mouse: ENSMUSG00000050270, Tmem220, transmembrane protein 220, [Score=62.4, Expect=6e-12]} {RNA1509_42585} {RNA1310_39687, RNA1509_42585} {RNA1509_42585, RNA815_19504}
2. MligTC455_35688 139 2.89 Mlig455_038910

Neo: -

Age: -

 0.991 - - - - 0.991 - Mlig455_038910 {REF} {Length: 2619} {TRANSSPLICED} {RNA1509_23775} {RNA1310_6695.1, RNA1509_23775} {RNA1509_23775, RNA815_5748.1}
3. MligTC455_41625 27 0.55 Mlig455_004793

Neo: -

Age: -

Regeneration-upregulated R2: 7.202

Regeneration-enriched R2: 7.202

 0.981 - - - - 0.981 - Mlig455_004793 {REF} {Length: 975} {NoTransDecoderORF} {RNA1310_83747} {RNA815_39967}
4. MligTC455_27078 22 0.46 Mlig455_028337, Mlig455_066176

Neo: -

Age: -

 0.969 - - - - 0.969 -

Mlig455_028337 {REF} {Length: 887} {NoTransDecoderORF} {RNA1509_59553} {RNA1310_69307} {RNA815_55083}

Mlig455_066176 {REF} {Length: 883} {NoTransDecoderORF} {RNA1509_59553} {RNA1310_69307} {RNA815_55083}
5. MligTC455_33520 178 3.71 Mlig455_060230

Neo: Irradiation

Age: logFC(26M/2M)=0.435

 ZDHHC3 0.961 - - - - - 0.961 Mlig455_060230 {REF} {Length: 1161} {TRANSSPLICED} {Pfam: DHHC palmitoyltransferase [PF01529.22, score=78.5]} {Human: ENSG00000163812, ZDHHC3, zinc finger DHHC-type containing 3, [Score=192, Expect=7e-59]; ENSG00000280674, ZDHHC3, zinc finger DHHC-type containing 3, [Score=192, Expect=7e-59]; ENSG00000153786, ZDHHC7, zinc finger DHHC-type containing 7, [Score=189, Expect=6e-58]} {Mouse: ENSMUSG00000025786, Zdhhc3, zinc finger, DHHC domain containing 3, [Score=191, Expect=4e-59]; ENSMUSG00000031823, Zdhhc7, zinc finger, DHHC domain containing 7, [Score=190, Expect=2e-58]} {Dmel: FBgn0034057, CG8314, [Score=182, Expect=9e-56]} {Celegans: WBGene00018009, dhhc-3, Palmitoyltransferase, [Score=144, Expect=2e-41]} {Smed: dd_Smed_v6_7435_0_1, dd_Smed_v6_7435_0_1, [Score=175, Expect=2e-52]} {RNA1509_33679, RNA1509_44554} {RNA1310_7694, RNA1509_33679} {RNA1509_33679, RNA815_112.1}
6. MligTC455_44701 13 0.28 Mlig455_015346

Neo: -

Age: -

 LHX5 0.959 - - - - 0.959 - Mlig455_015346 {REF} {Length: 1954} {TRANSSPLICED} {Pfam: LIM domain [PF00412.24, score=93.9]; Homeodomain [PF00046.31, score=43.3]} {Human: ENSG00000089116, LHX5, LIM homeobox 5, [Score=176, Expect=5e-50]; ENSG00000274577, LHX1, LIM homeobox 1, [Score=169, Expect=2e-47]; ENSG00000273706, LHX1, LIM homeobox 1, [Score=169, Expect=2e-47]} {Mouse: ENSMUSG00000029595, Lhx5, LIM homeobox protein 5, [Score=176, Expect=3e-50]; ENSMUSG00000018698, Lhx1, LIM homeobox protein 1, [Score=168, Expect=2e-47]} {Dmel: FBgn0026411, Lim1, LIM homeobox 1, [Score=256, Expect=4e-80]} {Celegans: WBGene00003000, lin-11, [Score=127, Expect=2e-32]} {Smed: dd_Smed_v6_8252_0_1, dd_Smed_v6_8252_0_1, [Score=152, Expect=3e-42]} {RNA1310_35653} {RNA815_24965}
7. MligTC455_38671 32 0.67 Mlig455_020877, Mlig455_060658

Neo: -

Age: -

 MAP3K7, RTL1 0.958 - - - 0.958 - -

Mlig455_020877 {REF} {Length: 1966} {Pfam: Protein kinase domain [PF00069.27, score=59.0]; Protein tyrosine and serine/threonine kinase [PF07714.19, score=59.0]; MraW methylase family [PF01795.21, score=24.9]} {Human: ENSG00000135341, MAP3K7, mitogen-activated protein kinase kinase kinase 7, [Score=70.5, Expect=2e-12]; ENSG00000130758, MAP3K10, mitogen-activated protein kinase kinase kinase 10, [Score=69.3, Expect=7e-12]} {Mouse: ENSMUSG00000040390, Map3k10, mitogen-activated protein kinase kinase kinase 10, [Score=70.9, Expect=1e-12]; ENSMUSG00000028284, Map3k7, mitogen-activated protein kinase kinase kinase 7, [Score=70.1, Expect=1e-12]} {Dmel: FBgn0000723, FER, FER tyrosine kinase, [Score=63.5, Expect=2e-10]} {Celegans: WBGene00003931, pat-4, Integrin-linked protein kinase homolog pat-4, [Score=56.2, Expect=2e-08]} {Smed: dd_Smed_v6_8571_0_1, dd_Smed_v6_8571_0_1, [Score=64.3, Expect=7e-11]} {RNA1509_47567} {RNA1310_9609} {RNA815_3249.1}

Mlig455_060658 {REF} {Length: 6013} {Pfam: Reverse transcriptase (RNA-dependent DNA polymerase) [PF00078.29, score=119.5]; RNase H-like domain found in reverse transcriptase [PF17919.3, score=100.5]; RNase H-like domain found in reverse transcriptase [PF17917.3, score=89.2]; Protein kinase domain [PF00069.27, score=56.1]; Protein tyrosine and serine/threonine kinase [PF07714.19, score=56.1]; Integrase zinc binding domain [PF17921.3, score=47.1]; Integrase core domain [PF00665.28, score=44.2]; MraW methylase family [PF01795.21, score=20.5]} {Human: ENSG00000254656, RTL1, retrotransposon Gag like 1, [Score=88.2, Expect=1e-16]} {Mouse: ENSMUSG00000075592, Nynrin, NYN domain and retroviral integrase containing, [Score=71.6, Expect=1e-11]; ENSMUSG00000028284, Map3k7, mitogen-activated protein kinase kinase kinase 7, [Score=71.2, Expect=6e-12]; ENSMUSG00000040390, Map3k10, mitogen-activated protein kinase kinase kinase 10, [Score=68.9, Expect=5e-11]} {Dmel: FBgn0000723, FER, FER tyrosine kinase, [Score=62.4, Expect=2e-09]} {Celegans: WBGene00003931, pat-4, Integrin-linked protein kinase homolog pat-4, [Score=56.6, Expect=1e-07]} {Smed: dd_Smed_v6_6563_0_1, dd_Smed_v6_6563_0_1, [Score=309, Expect=2e-87]} {RNA1509_24311} {RNA1310_9609} {RNA815_3249.1}
8. MligTC455_10906 18 0.38 Mlig455_034473

Neo: -

Age: -

 0.957 - - - - 0.957 - Mlig455_034473 {REF} {Length: 1571} {RNA1509_25022} {RNA1310_121238} {RNA815_3404}
9. MligTC455_36489 39 0.82 Mlig455_068144

Neo: -

Age: logFC(26M/2M)=-0.470

 0.955 - - - - 0.955 - Mlig455_068144 {REF} {Length: 5372} {Smed: dd_Smed_v6_10509_0_1, dd_Smed_v6_10509_0_1, [Score=99.4, Expect=1e-21]} {RNA1509_10683, RNA1509_45649} {RNA1310_7527.1, RNA1509_10683, RNA1509_45649} {RNA1509_10683, RNA1509_45649, RNA815_3700.1}
10. MligTC455_46194 281 5.86 Mlig455_038867

Neo: Irradiation

Age: Up-Down-Down

Region-specific R4: 2.707

Region-enriched R4: 2.107/0.01387

 FBXO33 0.954 - - - - - 0.954 Mlig455_038867 {REF} {Length: 3995} {Pfam: F-box-like [PF12937.9, score=24.1]} {Human: ENSG00000165355, FBXO33, F-box protein 33, [RH, Score=73.6, Expect=3e-13]} {Mouse: ENSMUSG00000035329, Fbxo33, F-box protein 33, [RH, Score=70.1, Expect=2e-12]} {Dmel: FBgn0035959, CG4911, [RH, Score=123, Expect=1e-30]} {RNA1509_34211, RNA1509_49549, RNA1509_54797} {RNA1310_15576, RNA1509_34211, RNA1509_49549, RNA1509_54797} {RNA1509_34211, RNA1509_49549, RNA1509_54797, RNA815_6250.1}
11. MligTC455_01492 21 0.43 Mlig455_051717

Neo: -

Age: -

 0.953 - - - - 0.953 - Mlig455_051717 {REF} {Length: 712} {NoTransDecoderORF}
12. MligTC455_54461 21 0.43 Mlig455_026728

Neo: -

Age: -

 0.953 - - - - 0.953 - Mlig455_026728 {REF} {Length: 717} {NoTransDecoderORF}
13. MligTC455_37175 13 0.26 Mlig455_011884

Neo: -

Age: -

 0.95 - - - - 0.950 - Mlig455_011884 {REF} {Length: 941} {NoTransDecoderORF} {RNA1509_44223} {RNA1310_54802} {RNA815_64986}

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