TomoSeq data search

Data search

Results for MligTC455_49116

Cluster	Total UMI counts	Global CPM	Transcripts	Categories	Human homolog	Annotation
MligTC455_49116	345	7.19	Mlig455_044608	Neo: - Age: logFC(26M/2M)=0.329		Mlig455_044608 {REF} {Length: 2338} {TRANSSPLICED} {RNA1509_28377, RNA1509_45585} {RNA1310_9768, RNA1509_28377, RNA1509_45585} {RNA1509_28377, RNA1509_45585, RNA815_3390}

Cluster

Total UMI counts

Global CPM

Transcripts

Cumulative graph for MligTC455_49116

Region-enriched expression

Region	logFC	logCPM	Pvalue	FDR
RegionR1	-0.5	3.313	0.73850	1.00000
RegionR2	-0.131	3.313	0.82228	1.00000
RegionR3	0.005	3.313	0.99053	1.00000
RegionR4	0.499	3.313	0.32879	0.64676
RegionR5	-0.39	3.313	0.38725	0.74279
RegionR6	0.077	3.313	0.87158	1.00000
RegionR7	0.628	3.313	0.28826	0.92205
RegionR8	-0.188	3.313	0.83236	1.00000

Regeneration-enriched expression

Region	logFC	logCPM	PValue	FDR
RegenerationR1	-6.311	3.313	0.20839	0.94839
RegenerationR2	-0.161	3.313	0.71559	0.96210
RegenerationR3	-0.533	3.313	0.28580	0.71791
RegenerationR4	-0.768	3.313	0.10894	0.50777
RegenerationR5	0.248	3.313	0.58387	0.90217
RegenerationR6	-0.15	3.313	0.76384	0.95826
RegenerationBL	0.167	3.313	0.78012	1.00000
RegenerationTP	-0.754	3.313	0.32121	0.76591

Genes with expression patterns similar to MligTC455_49116

Nr.	Cluster	Total UMI counts	Global CPM	Transcripts	Categories	Human homolog	Σ Spearman correlations	Int1	Int2	Int3	Reg1	Reg2	Reg3	Annotation
1.	MligTC455_49116	345	7.19	Mlig455_044608	Neo: - Age: logFC(26M/2M)=0.329		6	1.000	1.000	1.000	1.000	1.000	1.000	Mlig455_044608 {REF} {Length: 2338} {TRANSSPLICED} {RNA1509_28377, RNA1509_45585} {RNA1310_9768, RNA1509_28377, RNA1509_45585} {RNA1509_28377, RNA1509_45585, RNA815_3390}
2.	MligTC455_40719	64	1.34	Mlig455_028263	Neo: Irradiation Age: -	CHAF1A	0.963	0.963	-	-	-	-	-	Mlig455_028263 {REF} {Length: 2127} {Pfam: Chromatin assembly factor 1 subunit A [PF12253.10, score=88.9]} {Human: ENSG00000167670, CHAF1A, chromatin assembly factor 1 subunit A, [RH, Score=100, Expect=7e-22]} {Mouse: ENSMUSG00000002835, Chaf1a, chromatin assembly factor 1, subunit A (p150), [RH, Score=86.7, Expect=2e-17]} {Dmel: FBgn0030054, Caf1-180, Chromatin assembly factor 1, p180 subunit, [RH, Score=113, Expect=3e-26]} {Celegans: WBGene00011532, chaf-1, CHromatin Assembly Factor, [Score=62.4, Expect=3e-10]} {Smed: dd_Smed_v6_8919_0_1, dd_Smed_v6_8919_0_1, [RH, Score=99.8, Expect=3e-22]} {RNA1509_9763} {RNA1310_16381} {RNA815_2066}
3.	MligTC455_52381	118	2.45	Mlig455_014895	Neo: - Age: -	ERP44	0.962	0.962	-	-	-	-	-	Mlig455_014895 {REF} {Length: 1800} {Pfam: Thioredoxin-like domain [PF13848.8, score=104.9]; Thioredoxin [PF00085.22, score=63.6]; Calsequestrin [PF01216.19, score=19.2]} {Human: ENSG00000023318, ERP44, endoplasmic reticulum protein 44, [Score=240, Expect=2e-74]} {Mouse: ENSMUSG00000028343, Erp44, endoplasmic reticulum protein 44, [Score=249, Expect=9e-78]} {Dmel: FBgn0030734, CG9911, [Score=236, Expect=7e-73]} {Celegans: WBGene00016278, erp-44.1, [Score=238, Expect=4e-74]} {Smed: dd_Smed_v6_2276_0_1, dd_Smed_v6_2276_0_1, [Score=233, Expect=4e-72]} {RNA1509_48143} {RNA1310_14258.1} {RNA815_8957.1}
4.	MligTC455_17120	139	2.9	Mlig455_027978	Neo: - Age: Down-Up-Up	PCMT1	0.961	0.961	-	-	-	-	-	Mlig455_027978 {REF} {Length: 870} {TRANSSPLICED} {Pfam: Protein-L-isoaspartate(D-aspartate) O-methyltransferase (PCMT) [PF01135.21, score=216.0]; Methyltransferase domain [PF13847.8, score=31.6]; Methyltransferase domain [PF13649.8, score=26.6]; tRNA methyltransferase complex GCD14 subunit [PF08704.12, score=23.1]; Methyltransferase domain [PF08241.14, score=21.4]; Methyltransferase domain [PF13679.8, score=19.7]} {Human: ENSG00000120265, PCMT1, protein-L-isoaspartate (D-aspartate) O-methyltransferase, [Score=205, Expect=3e-66]} {Mouse: ENSMUSG00000116405, Pcmt1, protein-L-isoaspartate (D-aspartate) O-methyltransferase 1, [Score=202, Expect=9e-65]; ENSMUSG00000019795, Pcmt1, protein-L-isoaspartate (D-aspartate) O-methyltransferase 1, [Score=202, Expect=9e-65]} {Dmel: FBgn0086768, Pcmt, Protein-L-isoaspartate (D-aspartate) O-methyltransferase, [Score=184, Expect=3e-58]} {Celegans: WBGene00003954, pcm-1, Protein-L-isoaspartate O-methyltransferase, [Score=189, Expect=3e-60]} {Smed: dd_Smed_v6_6199_0_1, dd_Smed_v6_6199_0_1, [Score=186, Expect=6e-59]} {RNA1310_30151} {RNA815_54398}
5.	MligTC455_49224	228	4.75	Mlig455_020671, Mlig455_048768	Neo: - Age: -	VPS41	0.961	0.961	-	-	-	-	-	Mlig455_020671 {REF} {Length: 3300} {TRANSSPLICED} {Pfam: Region in Clathrin and VPS [PF00637.22, score=59.8]; zinc-RING finger domain [PF14634.8, score=22.0]} {Human: ENSG00000006715, VPS41, VPS41, HOPS complex subunit, [RH, Score=464, Expect=5e-150]} {Mouse: ENSMUSG00000041236, Vps41, VPS41 HOPS complex subunit, [RH, Score=459, Expect=3e-148]} {Dmel: FBgn0002566, lt, light, [RH, Score=401, Expect=2e-126]} {Celegans: WBGene00017974, vps-41, Vacuolar protein sorting-associated protein 41 homolog, [RH, Score=303, Expect=2e-89]} {Smed: dd_Smed_v6_3481_0_1, dd_Smed_v6_3481_0_1, [RH, Score=390, Expect=7e-122]} {RNA1509_34132} {RNA1310_6719} {RNA815_4867} Mlig455_048768 {REF} {Length: 3692} {Pfam: Region in Clathrin and VPS [PF00637.22, score=59.8]; zinc-RING finger domain [PF14634.8, score=22.0]} {Human: ENSG00000006715, VPS41, VPS41, HOPS complex subunit, [RH, Score=464, Expect=5e-150]} {Mouse: ENSMUSG00000041236, Vps41, VPS41 HOPS complex subunit, [RH, Score=459, Expect=4e-148]} {Dmel: FBgn0002566, lt, light, [RH, Score=401, Expect=2e-126]} {Celegans: WBGene00017974, vps-41, Vacuolar protein sorting-associated protein 41 homolog, [RH, Score=302, Expect=5e-89]} {Smed: dd_Smed_v6_3481_0_1, dd_Smed_v6_3481_0_1, [RH, Score=389, Expect=2e-121]} {RNA1509_34132} {RNA1310_6719, RNA1509_34132} {RNA1509_34132, RNA815_4867}
6.	MligTC455_04757	168	3.49	Mlig455_017363, Mlig455_030952	Neo: - Age: -	KCNAB2	0.958	0.958	-	-	-	-	-	Mlig455_017363 {REF} {Length: 1707} {Pfam: Aldo/keto reductase family [PF00248.23, score=178.4]} {Human: ENSG00000069424, KCNAB2, potassium voltage-gated channel subfamily A regulatory beta subunit 2, [Score=416, Expect=3e-143]; ENSG00000169282, KCNAB1, potassium voltage-gated channel subfamily A member regulatory beta subunit 1, [Score=415, Expect=2e-142]} {Mouse: ENSMUSG00000028931, Kcnab2, potassium voltage-gated channel, shaker-related subfamily, beta member 2, [Score=417, Expect=7e-144]; ENSMUSG00000027827, Kcnab1, potassium voltage-gated channel, shaker-related subfamily, beta member 1, [Score=415, Expect=1e-142]} {Dmel: FBgn0263220, Hk, Hyperkinetic, [Score=271, Expect=9e-87]} {Celegans: WBGene00015565, C07D8.6, [Score=59.7, Expect=1e-09]} {RNA1310_37865} {RNA815_21724} Mlig455_030952 {REF} {Length: 3817} {Pfam: Aldo/keto reductase family [PF00248.23, score=177.5]} {Human: ENSG00000069424, KCNAB2, potassium voltage-gated channel subfamily A regulatory beta subunit 2, [Score=412, Expect=6e-143]; ENSG00000169282, KCNAB1, potassium voltage-gated channel subfamily A member regulatory beta subunit 1, [Score=412, Expect=5e-142]; ENSG00000170049, KCNAB3, potassium voltage-gated channel subfamily A regulatory beta subunit 3, [Score=393, Expect=2e-134]} {Mouse: ENSMUSG00000028931, Kcnab2, potassium voltage-gated channel, shaker-related subfamily, beta member 2, [Score=414, Expect=9e-144]; ENSMUSG00000027827, Kcnab1, potassium voltage-gated channel, shaker-related subfamily, beta member 1, [Score=412, Expect=4e-142]} {Dmel: FBgn0263220, Hk, Hyperkinetic, [Score=266, Expect=2e-85]} {Celegans: WBGene00015565, C07D8.6, [Score=62.0, Expect=2e-10]} {RNA1509_11669} {RNA1310_37865} {RNA815_27885}
7.	MligTC455_16082	200	4.16	Mlig455_047900	Neo: - Age: logFC(26M/2M)=2.134		0.957	0.957	-	-	-	-	-	Mlig455_047900 {REF} {Length: 1622} {TRANSSPLICED} {Pfam: Family of unknown function (DUF5810) [PF19126.2, score=24.1]; Ubiquitin-Binding Zinc Finger [PF18439.3, score=19.7]} {RNA1509_56622} {RNA1310_70015} {RNA815_35594}
8.	MligTC455_52900	252	5.26	Mlig455_015580	Neo: - Age: -		0.956	-	-	-	-	0.956	-	Mlig455_015580 {REF} {Length: 1947} {Pfam: Autophagy-related protein 27 [PF09451.12, score=62.7]; Mannose-6-phosphate receptor [PF02157.17, score=46.6]} {Smed: dd_Smed_v6_1447_0_1, dd_Smed_v6_1447_0_1, [RH, Score=110, Expect=3e-29]} {RNA1509_20552} {RNA1310_31940, RNA1509_20552} {RNA1509_20552, RNA815_14758}
9.	MligTC455_12817	26	0.54	Mlig455_039450	Neo: Int S/G2/M Age: -		0.955	0.955	-	-	-	-	-	Mlig455_039450 {REF} {Length: 1843} {RNA1310_54745} {RNA815_39086}
10.	MligTC455_17584	231	4.8	Mlig455_021904	Neo: - Age: -		0.953	0.953	-	-	-	-	-	Mlig455_021904 {REF} {Length: 798} {RNA1310_53523} {RNA815_28301.1}
11.	MligTC455_25642	404	8.41	Mlig455_055674	Neo: - Age: logFC(26M/2M)=-0.267 Regeneration-downregulated BL: -3.906 Regeneration-depleted BL: -3.906	TRAF3	0.953	0.953	-	-	-	-	-	Mlig455_055674 {REF} {Length: 3425} {Pfam: TRAF-type zinc finger [PF02176.20, score=35.2]; Seven in absentia protein family [PF03145.18, score=32.2]} {Human: ENSG00000131323, TRAF3, TNF receptor associated factor 3, [Score=68.9, Expect=2e-11]} {Mouse: ENSMUSG00000021277, Traf3, TNF receptor-associated factor 3, [Score=75.5, Expect=1e-13]; ENSMUSG00000027164, Traf6, TNF receptor-associated factor 6, [Score=72.0, Expect=1e-12]} {Dmel: FBgn0026319, Traf4, TNF-receptor-associated factor 4, [Score=58.5, Expect=1e-08]} {Smed: dd_Smed_v6_8046_0_1, dd_Smed_v6_8046_0_1, [Score=79.0, Expect=4e-15]} {RNA1509_45640} {RNA1310_11522} {RNA815_6004}
12.	MligTC455_27627	225	4.69	Mlig455_065807	Neo: - Age: Down-Up-Down, logFC(26M/2M)=-0.382	HEYL	0.953	0.953	-	-	-	-	-	Mlig455_065807 {REF} {Length: 1800} {Pfam: Helix-loop-helix DNA-binding domain [PF00010.28, score=45.1]; Hairy Orange [PF07527.15, score=20.8]} {Human: ENSG00000163909, HEYL, hes related family bHLH transcription factor with YRPW motif-like, [Score=85.9, Expect=2e-18]; ENSG00000135547, HEY2, hes related family bHLH transcription factor with YRPW motif 2, [Score=85.5, Expect=2e-18]} {Mouse: ENSMUSG00000019789, Hey2, hairy/enhancer-of-split related with YRPW motif 2, [Score=86.3, Expect=2e-18]; ENSMUSG00000032744, Heyl, hairy/enhancer-of-split related with YRPW motif-like, [Score=85.5, Expect=2e-18]} {Dmel: FBgn0259938, cwo, clockwork orange, [RH, Score=84.0, Expect=2e-17]} {Smed: dd_Smed_v6_22479_0_1, dd_Smed_v6_22479_0_1, [Score=70.9, Expect=9e-14]} {RNA1509_35089} {RNA1310_373, RNA1509_35089} {RNA1509_35089, RNA815_5586}
13.	MligTC455_42459	156	3.24	Mlig455_057632	Neo: - Age: Down-Up-Up, logFC(26M/2M)=0.712		0.953	0.953	-	-	-	-	-	Mlig455_057632 {REF} {Length: 1303} {RNA1310_51585} {RNA815_30465}
14.	MligTC455_09826	156	3.26	Mlig455_056834	Neo: - Age: Down-Up-Down		0.952	0.952	-	-	-	-	-	Mlig455_056834 {REF} {Length: 1255} {TRANSSPLICED} {RNA1310_44102} {RNA815_12654}
15.	MligTC455_33985	25	0.52	Mlig455_039138	Neo: - Age: Up-Down-Down		0.952	0.952	-	-	-	-	-	Mlig455_039138 {REF} {Length: 3856} {Pfam: Lecithin retinol acyltransferase [PF04970.15, score=56.2]} {RNA1509_11292} {RNA1310_3384} {RNA815_776.1}
16.	MligTC455_35002	390	8.12	Mlig455_070372	Neo: - Age: Down-Up-Down, logFC(26M/2M)=-0.711	SVEP1	0.952	0.952	-	-	-	-	-	Mlig455_070372 {REF} {Length: 1042} {Pfam: EGF-like domain [PF00008.29, score=33.8]; EGF-like domain [PF07974.15, score=21.9]} {Human: ENSG00000165124, SVEP1, sushi, von Willebrand factor type A, EGF and pentraxin domain containing 1, [Score=51.6, Expect=3e-07]; ENSG00000148400, NOTCH1, notch 1, [Score=51.2, Expect=4e-07]} {Mouse: ENSMUSG00000047793, Sned1, sushi, nidogen and EGF-like domains 1, [Score=58.9, Expect=5e-10]} {Dmel: FBgn0004647, N, Notch, [Score=50.1, Expect=4e-07]} {RNA1509_29817} {RNA1310_28236} {RNA815_11876.1}
17.	MligTC455_43302	297	6.19	Mlig455_001798	Neo: - Age: Down-Up-Down, logFC(26M/2M)=-0.756		0.952	0.952	-	-	-	-	-	Mlig455_001798 {REF} {Length: 2162} {RNA1509_14667} {RNA1310_23413, RNA1509_14667} {RNA1509_14667, RNA815_13658}
18.	MligTC455_11478	98	2.05	Mlig455_037891	Neo: - Age: -		0.951	0.951	-	-	-	-	-	Mlig455_037891 {REF} {Length: 868} {Pfam: Neurohypophysial hormones, C-terminal Domain [PF00184.19, score=53.3]} {Mouse: ENSMUSG00000037727, Avp, arginine vasopressin, [Score=59.3, Expect=3e-11]} {RNA1310_49297} {RNA815_57902}
19.	MligTC455_20240	99	2.06	Mlig455_001024, Mlig455_065675	Neo: - Age: Down-Up-Up		0.951	0.951	-	-	-	-	-	Mlig455_001024 {REF} {Length: 2056} {Smed: dd_Smed_v6_12148_0_2, dd_Smed_v6_12148_0_2, [Score=62.4, Expect=7e-13]} {RNA1509_7841} {RNA1310_18810} {RNA815_19156} Mlig455_065675 {REF} {Length: 2049} {Smed: dd_Smed_v6_12148_0_2, dd_Smed_v6_12148_0_2, [Score=72.4, Expect=5e-15]} {RNA1509_7841} {RNA1310_18810} {RNA815_19156}
20.	MligTC455_24455	131	2.72	Mlig455_006310	Neo: - Age: -		0.951	0.951	-	-	-	-	-	Mlig455_006310 {REF} {Length: 2448} {RNA1509_7020} {RNA1310_76552} {RNA815_41542}
21.	MligTC455_41143	785	16.35	Mlig455_013536	Neo: - Age: Up-Down-Down	NR1I2	0.951	0.951	-	-	-	-	-	Mlig455_013536 {REF} {Length: 3809} {Pfam: Zinc finger, C4 type (two domains) [PF00105.20, score=76.2]} {Human: ENSG00000144852, NR1I2, nuclear receptor subfamily 1 group I member 2, [RH, Score=137, Expect=4e-34]} {Mouse: ENSMUSG00000022479, Vdr, vitamin D (1,25-dihydroxyvitamin D3) receptor, [Score=130, Expect=3e-32]} {Dmel: FBgn0000546, EcR, Ecdysone receptor, [Score=133, Expect=3e-32]} {Celegans: WBGene00000908, daf-12, Nuclear hormone receptor family member daf-12, [Score=122, Expect=6e-29]} {Smed: dd_Smed_v6_11714_0_1, dd_Smed_v6_11714_0_1, [Score=144, Expect=4e-37]} {RNA1509_14193, RNA1509_26163} {RNA1310_6720, RNA1509_14193, RNA1509_26163} {RNA1509_14193, RNA1509_26163, RNA815_3240.1}