Data search


search
Exact
Search

Results for MligTC455_49127

Cluster Total UMI counts Global CPM Transcripts Categories Human homolog Annotation
MligTC455_49127 2061 42.93 Mlig455_001896

Neo: -

Age: Down-Up-Up

Mlig455_001896 {REF} {Length: 894} {TRANSSPLICED} {Pfam: Roadblock/LC7 domain [PF03259.19, score=24.8]} {Dmel: FBgn0035469, CG14977, [RH, Score=50.8, Expect=2e-09]} {RNA1509_20564, RNA1509_25268, RNA1509_3565, RNA1509_46438, RNA1509_53218} {RNA1310_29229, RNA1509_20564, RNA1509_25268, RNA1509_46438, RNA1509_53218} {RNA1509_20564, RNA1509_25268, RNA1509_46438, RNA1509_53218, RNA815_11630.1}

Cumulative graph for MligTC455_49127

Region-enriched expression

Region logFC logCPM Pvalue FDR Specificity
RegionR1 -2.026 5.602 0.01151 0.31055
RegionR2 -0.278 5.602 0.52308 0.89644
RegionR3 0.563 5.602 0.11525 0.59003
RegionR4 0.557 5.602 0.16172 0.42003
RegionR5 0.922 5.602 0.00608 0.04015
RegionR6 0.817 5.602 0.02070 0.25993
RegionR7 0.052 5.602 0.89648 1.00000
RegionR8 -0.607 5.602 0.21260 0.81653

Regeneration-enriched expression

Region logFC logCPM PValue FDR Specificity
RegenerationR1 0.026 5.602 0.98001 1.00000
RegenerationR2 -0.329 5.602 0.44983 0.84644
RegenerationR3 -0.199 5.602 0.64739 0.92786
RegenerationR4 -0.088 5.602 0.84468 1.00000
RegenerationR5 -0.087 5.602 0.83774 1.00000
RegenerationR6 -0.421 5.602 0.34024 0.68624
RegenerationBL -0.317 5.602 0.46680 0.83339
RegenerationTP 0.502 5.602 0.26560 0.71345


Genes with expression patterns similar to MligTC455_49127

Nr. Cluster Total UMI counts Global CPM Transcripts Categories Human homolog Σ Spearman correlations Int1 Int2 Int3 Reg1 Reg2 Reg3 Annotation
1. MligTC455_49127 2061 42.93 Mlig455_001896

Neo: -

Age: Down-Up-Up

6 1.000 1.000 1.000 1.000 1.000 1.000 Mlig455_001896 {REF} {Length: 894} {TRANSSPLICED} {Pfam: Roadblock/LC7 domain [PF03259.19, score=24.8]} {Dmel: FBgn0035469, CG14977, [RH, Score=50.8, Expect=2e-09]} {RNA1509_20564, RNA1509_25268, RNA1509_3565, RNA1509_46438, RNA1509_53218} {RNA1310_29229, RNA1509_20564, RNA1509_25268, RNA1509_46438, RNA1509_53218} {RNA1509_20564, RNA1509_25268, RNA1509_46438, RNA1509_53218, RNA815_11630.1}
2. MligTC455_23256 1851 38.55 Mlig455_038700

Neo: -

Age: logFC(26M/2M)=0.556

Region-enriched R4: 1.320/0.00319
Region-enriched R5: 1.042/0.00372

POLR2L 1.798 - - - 0.960 0.838 - Mlig455_038700 {REF} {Length: 631} {TRANSSPLICED} {Pfam: RNA polymerases N / 8 kDa subunit [PF01194.19, score=105.2]} {Human: ENSG00000177700, POLR2L, RNA polymerase II subunit L, [RH, Score=105, Expect=1e-31]} {Mouse: ENSMUSG00000038489, Polr2l, polymerase (RNA) II (DNA directed) polypeptide L, [RH, Score=105, Expect=8e-32]} {Dmel: FBgn0039218, Rpb10, [RH, Score=104, Expect=1e-31]} {Celegans: WBGene00021347, rpb-10, DNA-directed RNA polymerases I, II, and III subunit RPABC5, [RH, Score=106, Expect=2e-32]} {Smed: dd_Smed_v6_6731_0_1, dd_Smed_v6_6731_0_1, [RH, Score=107, Expect=5e-33]} {RNA1509_13354, RNA1509_20815, RNA1509_53967} {RNA1310_54340, RNA1509_13354, RNA1509_20815, RNA1509_53967} {RNA1509_13354, RNA1509_20815, RNA1509_53967, RNA815_28190}
3. MligTC455_23255 1839 38.31 Mlig455_038687

Neo: -

Age: -

Region-enriched R4: 1.354/0.00273
Region-enriched R5: 1.032/0.00470

POLR2L 1.797 - - - 0.959 0.838 - Mlig455_038687 {REF} {Length: 625} {TRANSSPLICED} {Pfam: RNA polymerases N / 8 kDa subunit [PF01194.19, score=105.2]} {Human: ENSG00000177700, POLR2L, RNA polymerase II subunit L, [RH, Score=105, Expect=1e-31]} {Mouse: ENSMUSG00000038489, Polr2l, polymerase (RNA) II (DNA directed) polypeptide L, [RH, Score=105, Expect=8e-32]} {Dmel: FBgn0039218, Rpb10, [RH, Score=104, Expect=1e-31]} {Celegans: WBGene00021347, rpb-10, DNA-directed RNA polymerases I, II, and III subunit RPABC5, [RH, Score=106, Expect=2e-32]} {Smed: dd_Smed_v6_6731_0_1, dd_Smed_v6_6731_0_1, [RH, Score=107, Expect=5e-33]} {RNA1509_53967} {RNA1310_54340} {RNA815_28190}
4. MligTC455_23658 5269 109.77 Mlig455_020388, Mlig455_058433

Neo: Int S/G2/M

Age: -

Region-enriched R4: 1.201/0.00027

NEDD8 0.985 - - - 0.985 - -

Mlig455_020388 {REF} {Length: 731} {TRANSSPLICED} {Pfam: Ubiquitin family [PF00240.25, score=90.3]; Ubiquitin-2 like Rad60 SUMO-like [PF11976.10, score=58.5]; TANK binding kinase 1 ubiquitin-like domain [PF18396.3, score=21.1]; Ubiquitin-like domain [PF14560.8, score=20.7]} {Human: ENSG00000285246, NEDD8, neural precursor cell expressed, developmentally down-regulated 8, [RH, Score=134, Expect=1e-42]; ENSG00000129559, NEDD8, neural precursor cell expressed, developmentally down-regulated 8, [RH, Score=134, Expect=1e-42]} {Mouse: ENSMUSG00000010376, Nedd8, neural precursor cell expressed, developmentally down-regulated gene 8, [RH, Score=119, Expect=7e-37]} {Dmel: FBgn0032725, Nedd8, [RH, Score=134, Expect=1e-42]} {Celegans: WBGene00003587, ned-8, NEDD8, [RH, Score=132, Expect=3e-42]} {Smed: dd_Smed_v6_403_0_1, dd_Smed_v6_403_0_1, [RH, Score=133, Expect=1e-42]} {RNA1509_29083, RNA1509_6695} {RNA1310_34741, RNA1509_29083} {RNA1509_29083, RNA815_23503}

Mlig455_058433 {REF} {Length: 1384} {TRANSSPLICED} {Pfam: Ubiquitin family [PF00240.25, score=90.3]; Ubiquitin-2 like Rad60 SUMO-like [PF11976.10, score=58.5]; TANK binding kinase 1 ubiquitin-like domain [PF18396.3, score=21.1]; Ubiquitin-like domain [PF14560.8, score=20.7]} {Human: ENSG00000285246, NEDD8, neural precursor cell expressed, developmentally down-regulated 8, [RH, Score=134, Expect=1e-42]; ENSG00000129559, NEDD8, neural precursor cell expressed, developmentally down-regulated 8, [RH, Score=134, Expect=1e-42]} {Mouse: ENSMUSG00000010376, Nedd8, neural precursor cell expressed, developmentally down-regulated gene 8, [RH, Score=119, Expect=7e-37]} {Dmel: FBgn0032725, Nedd8, [RH, Score=134, Expect=1e-42]} {Celegans: WBGene00003587, ned-8, NEDD8, [RH, Score=132, Expect=3e-42]} {Smed: dd_Smed_v6_403_0_1, dd_Smed_v6_403_0_1, [RH, Score=133, Expect=1e-42]} {RNA1509_12405, RNA1509_3499, RNA1509_4548, RNA1509_51126, RNA1509_6695} {RNA1310_34741, RNA1509_12405, RNA1509_3499, RNA1509_4548, RNA1509_51126, RNA1509_6695} {RNA1509_12405, RNA1509_3499, RNA1509_4548, RNA1509_51126, RNA1509_6695, RNA815_23503}
5. MligTC455_18399 4227 88.07 Mlig455_028751

Neo: Int S/G2/M

Age: logFC(26M/2M)=0.949

Region-enriched R5: 1.135/0.00000

C1orf123 0.977 - - - 0.977 - - Mlig455_028751 {REF} {Length: 2418} {TRANSSPLICED} {Pfam: Eukaryotic protein of unknown function (DUF866) [PF05907.15, score=172.7]; Myb DNA-binding like [PF15963.7, score=87.8]; Myb-like DNA-binding domain [PF00249.33, score=19.6]} {Human: ENSG00000162384, C1orf123, chromosome 1 open reading frame 123, [RH, Score=181, Expect=3e-53]} {Mouse: ENSMUSG00000028608, 0610037L13Rik, RIKEN cDNA 0610037L13 gene, [RH, Score=184, Expect=4e-54]} {Dmel: FBgn0033810, CG4646, [RH, Score=139, Expect=2e-38]} {Celegans: WBGene00009776, F46B6.12, UPF0587 protein F46B6.12, [RH, Score=150, Expect=2e-42]} {Smed: dd_Smed_v6_8635_0_1, dd_Smed_v6_8635_0_1, [RH, Score=153, Expect=1e-43]} {RNA1509_11977, RNA1509_31410, RNA1509_52861, RNA1509_5315, RNA1509_54892} {RNA1310_18434, RNA1509_11977, RNA1509_31410, RNA1509_52861, RNA1509_54892} {RNA1509_11977, RNA1509_31410, RNA1509_52861, RNA1509_54892, RNA815_17428.1}
6. MligTC455_16520 1751 36.48 Mlig455_052750

Neo: -

Age: -

0.959 - - - 0.959 - - Mlig455_052750 {REF} {Length: 2878} {Pfam: WH2 motif [PF02205.22, score=34.4]} {Smed: dd_Smed_v6_9660_0_1, dd_Smed_v6_9660_0_1, [RH, Score=48.5, Expect=1e-06]} {RNA1509_16839} {RNA1310_3084.1} {RNA815_2841.1}
7. MligTC455_47718 1133 23.61 Mlig455_005285

Neo: -

Age: Down-Down-Up, logFC(26M/2M)=-0.451

Region-enriched R5: 1.343/0.00525

0.954 - - - 0.954 - - Mlig455_005285 {REF} {Length: 682} {TRANSSPLICED} {Pfam: Mitochondrial 28S ribosomal protein S32 [PF10210.11, score=28.4]} {RNA1509_9857} {RNA1310_44486.1, RNA1509_9857} {RNA1509_9857, RNA815_26211}

Refine r cutoff to:    Show

Berezikov Lab - 2020-2021 © ERIBA