TomoSeq data search

Data search

Results for MligTC455_49247

Cluster	Total UMI counts	Global CPM	Transcripts	Categories	Human homolog	Annotation
MligTC455_49247	453	9.44	Mlig455_008628	Neo: - Age: logFC(26M/2M)=0.514	CASKIN1	Mlig455_008628 {REF} {Length: 1752} {TRANSSPLICED} {Pfam: Ankyrin repeat [PF00023.32, score=48.1]; Ankyrin repeats (3 copies) [PF12796.9, score=43.6]; Ankyrin repeat [PF13606.8, score=37.5]; Ankyrin repeats (many copies) [PF13637.8, score=35.7]; Ankyrin repeats (many copies) [PF13857.8, score=35.5]} {Human: ENSG00000167971, CASKIN1, CASK interacting protein 1, [Score=54.3, Expect=3e-07]; ENSG00000144031, ANKRD53, ankyrin repeat domain 53, [Score=52.4, Expect=1e-06]} {Mouse: ENSMUSG00000033597, Caskin1, CASK interacting protein 1, [Score=54.7, Expect=2e-07]} {Dmel: FBgn0052343, Atac3, Ada2a-containing complex component 3, [Score=59.3, Expect=3e-09]} {Celegans: WBGene00006780, unc-44, AO66 ankyrin, [Score=52.8, Expect=4e-07]} {Smed: dd_Smed_v6_8140_0_1, dd_Smed_v6_8140_0_1, [RH, Score=57.0, Expect=3e-09]} {RNA1509_38678} {RNA1310_26942} {RNA815_20724}

Cluster

Total UMI counts

Global CPM

Transcripts

Categories

Human homolog

Annotation

MligTC455_49247

453

9.44

Mlig455_008628

Neo: -

Age: logFC(26M/2M)=0.514

CASKIN1

Mlig455_008628 {REF} {Length: 1752} {TRANSSPLICED} {Pfam: Ankyrin repeat [PF00023.32, score=48.1]; Ankyrin repeats (3 copies) [PF12796.9, score=43.6]; Ankyrin repeat [PF13606.8, score=37.5]; Ankyrin repeats (many copies) [PF13637.8, score=35.7]; Ankyrin repeats (many copies) [PF13857.8, score=35.5]} {Human: ENSG00000167971, CASKIN1, CASK interacting protein 1, [Score=54.3, Expect=3e-07]; ENSG00000144031, ANKRD53, ankyrin repeat domain 53, [Score=52.4, Expect=1e-06]} {Mouse: ENSMUSG00000033597, Caskin1, CASK interacting protein 1, [Score=54.7, Expect=2e-07]} {Dmel: FBgn0052343, Atac3, Ada2a-containing complex component 3, [Score=59.3, Expect=3e-09]} {Celegans: WBGene00006780, unc-44, AO66 ankyrin, [Score=52.8, Expect=4e-07]} {Smed: dd_Smed_v6_8140_0_1, dd_Smed_v6_8140_0_1, [RH, Score=57.0, Expect=3e-09]} {RNA1509_38678} {RNA1310_26942} {RNA815_20724}

Cumulative graph for MligTC455_49247

Region-enriched expression

Region	logFC	logCPM	Pvalue	FDR
RegionR1	-0.545	3.622	0.70892	1.00000
RegionR2	0.762	3.622	0.13407	0.45460
RegionR3	-0.537	3.622	0.25690	0.80118
RegionR4	-0.552	3.622	0.29501	0.60656
RegionR5	0.361	3.622	0.34033	0.68744
RegionR6	-0.415	3.622	0.38288	0.96149
RegionR7	0.634	3.622	0.25956	0.88671
RegionR8	0.292	3.622	0.70801	1.00000

Regeneration-enriched expression

Region	logFC	logCPM	PValue	FDR
RegenerationR1	-6.301	3.622	0.20920	0.94839
RegenerationR2	-0.4	3.622	0.29423	0.73672
RegenerationR3	0.331	3.622	0.48781	0.85368
RegenerationR4	0.435	3.622	0.35058	0.78062
RegenerationR5	-0.198	3.622	0.62077	0.91923
RegenerationR6	0.511	3.622	0.29522	0.64554
RegenerationBL	0.246	3.622	0.66074	0.99529
RegenerationTP	0.237	3.622	0.68962	1.00000

Genes with expression patterns similar to MligTC455_49247

Nr.	Cluster	Total UMI counts	Global CPM	Transcripts	Categories	Human homolog	Σ Spearman correlations	Int1	Int2	Int3	Reg1	Reg2	Reg3	Annotation
1.	MligTC455_49247	453	9.44	Mlig455_008628	Neo: - Age: logFC(26M/2M)=0.514	CASKIN1	6	1.000	1.000	1.000	1.000	1.000	1.000	Mlig455_008628 {REF} {Length: 1752} {TRANSSPLICED} {Pfam: Ankyrin repeat [PF00023.32, score=48.1]; Ankyrin repeats (3 copies) [PF12796.9, score=43.6]; Ankyrin repeat [PF13606.8, score=37.5]; Ankyrin repeats (many copies) [PF13637.8, score=35.7]; Ankyrin repeats (many copies) [PF13857.8, score=35.5]} {Human: ENSG00000167971, CASKIN1, CASK interacting protein 1, [Score=54.3, Expect=3e-07]; ENSG00000144031, ANKRD53, ankyrin repeat domain 53, [Score=52.4, Expect=1e-06]} {Mouse: ENSMUSG00000033597, Caskin1, CASK interacting protein 1, [Score=54.7, Expect=2e-07]} {Dmel: FBgn0052343, Atac3, Ada2a-containing complex component 3, [Score=59.3, Expect=3e-09]} {Celegans: WBGene00006780, unc-44, AO66 ankyrin, [Score=52.8, Expect=4e-07]} {Smed: dd_Smed_v6_8140_0_1, dd_Smed_v6_8140_0_1, [RH, Score=57.0, Expect=3e-09]} {RNA1509_38678} {RNA1310_26942} {RNA815_20724}
2.	MligTC455_42451	1076	22.41	Mlig455_041813	Neo: - Age: -	MRAS	1.782	0.809	-	-	-	-	0.973	Mlig455_041813 {REF} {Length: 1725} {TRANSSPLICED} {Pfam: Ras family [PF00071.24, score=175.9]; Ras of Complex, Roc, domain of DAPkinase [PF08477.15, score=70.7]; Elongation factor Tu GTP binding domain [PF00009.29, score=37.2]; ADP-ribosylation factor family [PF00025.23, score=36.2]; 50S ribosome-binding GTPase [PF01926.25, score=22.6]; Gtr1/RagA G protein conserved region [PF04670.14, score=19.0]} {Human: ENSG00000158186, MRAS, muscle RAS oncogene homolog, [RH, Score=238, Expect=1e-79]} {Mouse: ENSMUSG00000032470, Mras, muscle and microspikes RAS, [RH, Score=237, Expect=1e-79]} {Dmel: FBgn0003206, Ras64B, Ras oncogene at 64B, [Score=176, Expect=6e-56]} {Celegans: WBGene00004311, ras-2, GTP binding protein; R-RAS related, [RH, Score=240, Expect=4e-81]} {Smed: dd_Smed_v6_8100_0_2, dd_Smed_v6_8100_0_2, [RH, Score=207, Expect=4e-68]} {RNA1509_30166, RNA1509_49288, RNA1509_55541, RNA1509_9155} {RNA1310_17480.1, RNA1509_30166, RNA1509_49288, RNA1509_55541, RNA1509_9155} {RNA1509_30166, RNA1509_49288, RNA1509_55541, RNA1509_9155, RNA815_6725.1}
3.	MligTC455_33116	1217	25.35	Mlig455_042734, Mlig455_063152	Neo: - Age: Up-Down-Down Region-enriched R5: 1.296/0.01110	LDB2	0.958	-	-	-	0.958	-	-	Mlig455_042734 {REF} {Length: 5440} {TRANSSPLICED} {Pfam: LIM-domain binding protein [PF01803.18, score=81.8]; DSBA-like thioredoxin domain [PF01323.22, score=52.4]; LIM interaction domain (LID) [PF17916.3, score=24.7]} {Human: ENSG00000169744, LDB2, LIM domain binding 2, [Score=194, Expect=9e-55]} {Mouse: ENSMUSG00000039706, Ldb2, LIM domain binding 2, [Score=190, Expect=1e-53]} {Dmel: FBgn0013764, Chi, Chip, [Score=170, Expect=6e-45]} {Celegans: WBGene00002261, ldb-1, F58A3.1a; LIM Domain Binding protein, [Score=82.4, Expect=4e-16]} {Smed: dd_Smed_v6_3678_0_1, dd_Smed_v6_3678_0_1, [Score=174, Expect=2e-46]} {RNA1509_17636} {RNA1310_5022} {RNA815_16469} Mlig455_063152 {REF} {Length: 6235} {TRANSSPLICED} {Pfam: LIM-domain binding protein [PF01803.18, score=78.1]; LIM interaction domain (LID) [PF17916.3, score=24.9]} {Human: ENSG00000169744, LDB2, LIM domain binding 2, [Score=191, Expect=2e-54]} {Mouse: ENSMUSG00000039706, Ldb2, LIM domain binding 2, [Score=187, Expect=4e-53]} {Dmel: FBgn0013764, Chi, Chip, [Score=172, Expect=6e-46]} {Celegans: WBGene00002261, ldb-1, F58A3.1a; LIM Domain Binding protein, [Score=80.5, Expect=2e-15]} {Smed: dd_Smed_v6_3678_0_1, dd_Smed_v6_3678_0_1, [Score=172, Expect=7e-46]} {RNA1509_17636} {RNA1310_5022} {RNA815_16469}

Nr.

Cluster

Total UMI counts

Global CPM

Transcripts

Categories

Human homolog

Σ Spearman correlations

Int1

Int2

Int3

Reg1

Reg2

Reg3

Annotation

MligTC455_49247

453

9.44

Mlig455_008628

Neo: -

Age: logFC(26M/2M)=0.514

CASKIN1

1.000

MligTC455_42451

1076

22.41

Mlig455_041813

Neo: -

Age: -

MRAS

1.782

0.809

0.973

Mlig455_041813 {REF} {Length: 1725} {TRANSSPLICED} {Pfam: Ras family [PF00071.24, score=175.9]; Ras of Complex, Roc, domain of DAPkinase [PF08477.15, score=70.7]; Elongation factor Tu GTP binding domain [PF00009.29, score=37.2]; ADP-ribosylation factor family [PF00025.23, score=36.2]; 50S ribosome-binding GTPase [PF01926.25, score=22.6]; Gtr1/RagA G protein conserved region [PF04670.14, score=19.0]} {Human: ENSG00000158186, MRAS, muscle RAS oncogene homolog, [RH, Score=238, Expect=1e-79]} {Mouse: ENSMUSG00000032470, Mras, muscle and microspikes RAS, [RH, Score=237, Expect=1e-79]} {Dmel: FBgn0003206, Ras64B, Ras oncogene at 64B, [Score=176, Expect=6e-56]} {Celegans: WBGene00004311, ras-2, GTP binding protein; R-RAS related, [RH, Score=240, Expect=4e-81]} {Smed: dd_Smed_v6_8100_0_2, dd_Smed_v6_8100_0_2, [RH, Score=207, Expect=4e-68]} {RNA1509_30166, RNA1509_49288, RNA1509_55541, RNA1509_9155} {RNA1310_17480.1, RNA1509_30166, RNA1509_49288, RNA1509_55541, RNA1509_9155} {RNA1509_30166, RNA1509_49288, RNA1509_55541, RNA1509_9155, RNA815_6725.1}

MligTC455_33116

1217

25.35

Mlig455_042734, Mlig455_063152

Neo: -

Age: Up-Down-Down

Region-enriched R5: 1.296/0.01110

LDB2

0.958

Mlig455_042734 {REF} {Length: 5440} {TRANSSPLICED} {Pfam: LIM-domain binding protein [PF01803.18, score=81.8]; DSBA-like thioredoxin domain [PF01323.22, score=52.4]; LIM interaction domain (LID) [PF17916.3, score=24.7]} {Human: ENSG00000169744, LDB2, LIM domain binding 2, [Score=194, Expect=9e-55]} {Mouse: ENSMUSG00000039706, Ldb2, LIM domain binding 2, [Score=190, Expect=1e-53]} {Dmel: FBgn0013764, Chi, Chip, [Score=170, Expect=6e-45]} {Celegans: WBGene00002261, ldb-1, F58A3.1a; LIM Domain Binding protein, [Score=82.4, Expect=4e-16]} {Smed: dd_Smed_v6_3678_0_1, dd_Smed_v6_3678_0_1, [Score=174, Expect=2e-46]} {RNA1509_17636} {RNA1310_5022} {RNA815_16469}

Mlig455_063152 {REF} {Length: 6235} {TRANSSPLICED} {Pfam: LIM-domain binding protein [PF01803.18, score=78.1]; LIM interaction domain (LID) [PF17916.3, score=24.9]} {Human: ENSG00000169744, LDB2, LIM domain binding 2, [Score=191, Expect=2e-54]} {Mouse: ENSMUSG00000039706, Ldb2, LIM domain binding 2, [Score=187, Expect=4e-53]} {Dmel: FBgn0013764, Chi, Chip, [Score=172, Expect=6e-46]} {Celegans: WBGene00002261, ldb-1, F58A3.1a; LIM Domain Binding protein, [Score=80.5, Expect=2e-15]} {Smed: dd_Smed_v6_3678_0_1, dd_Smed_v6_3678_0_1, [Score=172, Expect=7e-46]} {RNA1509_17636} {RNA1310_5022} {RNA815_16469}