Data search
Results for MligTC455_33116
| Cluster | Total UMI counts | Global CPM | Transcripts | Categories | Human homolog | Annotation |
|---|---|---|---|---|---|---|
| MligTC455_33116 | 1217 | 25.35 | Mlig455_042734, Mlig455_063152 | Neo: - Age: Up-Down-Down Region-enriched R5: 1.296/0.01110 |
LDB2 | Mlig455_042734 {REF} {Length: 5440} {TRANSSPLICED} {Pfam: LIM-domain binding protein [PF01803.18, score=81.8]; DSBA-like thioredoxin domain [PF01323.22, score=52.4]; LIM interaction domain (LID) [PF17916.3, score=24.7]} {Human: ENSG00000169744, LDB2, LIM domain binding 2, [Score=194, Expect=9e-55]} {Mouse: ENSMUSG00000039706, Ldb2, LIM domain binding 2, [Score=190, Expect=1e-53]} {Dmel: FBgn0013764, Chi, Chip, [Score=170, Expect=6e-45]} {Celegans: WBGene00002261, ldb-1, F58A3.1a; LIM Domain Binding protein, [Score=82.4, Expect=4e-16]} {Smed: dd_Smed_v6_3678_0_1, dd_Smed_v6_3678_0_1, [Score=174, Expect=2e-46]} {RNA1509_17636} {RNA1310_5022} {RNA815_16469} Mlig455_063152 {REF} {Length: 6235} {TRANSSPLICED} {Pfam: LIM-domain binding protein [PF01803.18, score=78.1]; LIM interaction domain (LID) [PF17916.3, score=24.9]} {Human: ENSG00000169744, LDB2, LIM domain binding 2, [Score=191, Expect=2e-54]} {Mouse: ENSMUSG00000039706, Ldb2, LIM domain binding 2, [Score=187, Expect=4e-53]} {Dmel: FBgn0013764, Chi, Chip, [Score=172, Expect=6e-46]} {Celegans: WBGene00002261, ldb-1, F58A3.1a; LIM Domain Binding protein, [Score=80.5, Expect=2e-15]} {Smed: dd_Smed_v6_3678_0_1, dd_Smed_v6_3678_0_1, [Score=172, Expect=7e-46]} {RNA1509_17636} {RNA1310_5022} {RNA815_16469} |
Cumulative graph for MligTC455_33116
Region-enriched expression
| Region | logFC | logCPM | Pvalue | FDR | Specificity |
|---|---|---|---|---|---|
| RegionR1 | -0.816 | 4.878 | 0.46141 | 1.00000 | |
| RegionR2 | -0.069 | 4.878 | 0.90063 | 1.00000 | |
| RegionR3 | -0.128 | 4.878 | 0.78615 | 1.00000 | |
| RegionR4 | 0.65 | 4.878 | 0.22899 | 0.52173 | |
| RegionR5 | 1.296 | 4.878 | 0.00112 | 0.01110 | |
| RegionR6 | 1.026 | 4.878 | 0.01514 | 0.21507 | |
| RegionR7 | 0.676 | 4.878 | 0.16258 | 0.74452 | |
| RegionR8 | -2.634 | 4.878 | 0.00279 | 0.09116 |
Regeneration-enriched expression
| Region | logFC | logCPM | PValue | FDR | Specificity |
|---|---|---|---|---|---|
| RegenerationR1 | -1.046 | 4.878 | 0.55404 | 1.00000 | |
| RegenerationR2 | 0.496 | 4.878 | 0.29577 | 0.73818 | |
| RegenerationR3 | 0.405 | 4.878 | 0.42488 | 0.81810 | |
| RegenerationR4 | 0.179 | 4.878 | 0.74489 | 0.96939 | |
| RegenerationR5 | -0.249 | 4.878 | 0.59611 | 0.90853 | |
| RegenerationR6 | -0.122 | 4.878 | 0.80355 | 0.97912 | |
| RegenerationBL | 1.414 | 4.878 | 0.00707 | 0.08177 | |
| RegenerationTP | 1.319 | 4.878 | 0.04396 | 0.34806 |
Genes with expression patterns similar to MligTC455_33116
| Nr. | Cluster | Total UMI counts | Global CPM | Transcripts | Categories | Human homolog | Σ Spearman correlations | Int1 | Int2 | Int3 | Reg1 | Reg2 | Reg3 | Annotation |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1. | MligTC455_33116 | 1217 | 25.35 | Mlig455_042734, Mlig455_063152 | Neo: - Age: Up-Down-Down Region-enriched R5: 1.296/0.01110 |
LDB2 | 6 | 1.000 | 1.000 | 1.000 | 1.000 | 1.000 | 1.000 | Mlig455_042734 {REF} {Length: 5440} {TRANSSPLICED} {Pfam: LIM-domain binding protein [PF01803.18, score=81.8]; DSBA-like thioredoxin domain [PF01323.22, score=52.4]; LIM interaction domain (LID) [PF17916.3, score=24.7]} {Human: ENSG00000169744, LDB2, LIM domain binding 2, [Score=194, Expect=9e-55]} {Mouse: ENSMUSG00000039706, Ldb2, LIM domain binding 2, [Score=190, Expect=1e-53]} {Dmel: FBgn0013764, Chi, Chip, [Score=170, Expect=6e-45]} {Celegans: WBGene00002261, ldb-1, F58A3.1a; LIM Domain Binding protein, [Score=82.4, Expect=4e-16]} {Smed: dd_Smed_v6_3678_0_1, dd_Smed_v6_3678_0_1, [Score=174, Expect=2e-46]} {RNA1509_17636} {RNA1310_5022} {RNA815_16469} Mlig455_063152 {REF} {Length: 6235} {TRANSSPLICED} {Pfam: LIM-domain binding protein [PF01803.18, score=78.1]; LIM interaction domain (LID) [PF17916.3, score=24.9]} {Human: ENSG00000169744, LDB2, LIM domain binding 2, [Score=191, Expect=2e-54]} {Mouse: ENSMUSG00000039706, Ldb2, LIM domain binding 2, [Score=187, Expect=4e-53]} {Dmel: FBgn0013764, Chi, Chip, [Score=172, Expect=6e-46]} {Celegans: WBGene00002261, ldb-1, F58A3.1a; LIM Domain Binding protein, [Score=80.5, Expect=2e-15]} {Smed: dd_Smed_v6_3678_0_1, dd_Smed_v6_3678_0_1, [Score=172, Expect=7e-46]} {RNA1509_17636} {RNA1310_5022} {RNA815_16469} |
| 2. | MligTC455_48917 | 474 | 9.87 | Mlig455_027497 | Neo: - Age: - Region-enriched R5: 1.139/0.02580 |
DZIP1L | 1.691 | - | - | 0.731 | 0.960 | - | - | Mlig455_027497 {REF} {Length: 4092} {TRANSSPLICED} {Pfam: Iguana/Dzip1-like DAZ-interacting protein N-terminal [PF13815.8, score=114.0]} {Human: ENSG00000158163, DZIP1L, DAZ interacting zinc finger protein 1 like, [RH, Score=146, Expect=1e-35]; ENSG00000134874, DZIP1, DAZ interacting zinc finger protein 1, [RH, Score=145, Expect=3e-35]} {Mouse: ENSMUSG00000042156, Dzip1, DAZ interacting protein 1, [RH, Score=151, Expect=3e-37]; ENSMUSG00000037784, Dzip1l, DAZ interacting protein 1-like, [RH, Score=145, Expect=1e-35]} {Dmel: FBgn0039201, CG13617, [Score=58.5, Expect=2e-08]} {Smed: dd_Smed_v6_9365_0_1, dd_Smed_v6_9365_0_1, [RH, Score=178, Expect=3e-47]} {RNA1509_39545, RNA1509_7446} {RNA1310_6651.1, RNA1509_39545, RNA1509_7446} {RNA1509_39545, RNA1509_7446, RNA815_1943} |
| 3. | MligTC455_45780 | 1319 | 27.49 | Mlig455_034009, Mlig455_060388 | Neo: - Age: - Region-enriched R4: 1.293/0.00518 Regeneration-upregulated BL: 1.725 Regeneration-enriched BL: 1.725 |
STRN3 | 0.965 | - | - | - | 0.965 | - | - | Mlig455_034009 {REF} {Length: 4926} {Pfam: Striatin family [PF08232.14, score=152.1]; WD domain, G-beta repeat [PF00400.34, score=106.3]; Transcription factor IIA, alpha/beta subunit [PF03153.15, score=25.8]; Anaphase-promoting complex subunit 4 WD40 domain [PF12894.9, score=22.2]} {Human: ENSG00000196792, STRN3, striatin 3, [Score=313, Expect=9e-94]; ENSG00000115808, STRN, striatin, [Score=308, Expect=4e-92]; ENSG00000090372, STRN4, striatin 4, [Score=301, Expect=8e-91]} {Mouse: ENSMUSG00000020954, Strn3, striatin, calmodulin binding protein 3, [Score=485, Expect=3e-159]} {Dmel: FBgn0044323, Cka, Connector of kinase to AP-1, [Score=303, Expect=6e-91]} {Celegans: WBGene00010631, cash-1, CKA And Striatin Homolog, [RH, Score=283, Expect=4e-84]} {Smed: dd_Smed_v6_8286_0_1, dd_Smed_v6_8286_0_1, [Score=266, Expect=3e-77]} {RNA1509_18009, RNA1509_4159, RNA1509_8508} {RNA1310_1645.1, RNA1509_18009, RNA1509_8508} {RNA1509_18009, RNA1509_8508, RNA815_5062} Mlig455_060388 {REF} {Length: 5034} {Pfam: Striatin family [PF08232.14, score=152.1]; WD domain, G-beta repeat [PF00400.34, score=106.3]; Transcription factor IIA, alpha/beta subunit [PF03153.15, score=25.8]; Anaphase-promoting complex subunit 4 WD40 domain [PF12894.9, score=22.0]} {Human: ENSG00000196792, STRN3, striatin 3, [Score=312, Expect=2e-93]; ENSG00000115808, STRN, striatin, [Score=308, Expect=8e-92]; ENSG00000090372, STRN4, striatin 4, [Score=300, Expect=2e-90]} {Mouse: ENSMUSG00000020954, Strn3, striatin, calmodulin binding protein 3, [Score=484, Expect=7e-159]} {Dmel: FBgn0044323, Cka, Connector of kinase to AP-1, [Score=303, Expect=8e-91]} {Celegans: WBGene00010631, cash-1, CKA And Striatin Homolog, [RH, Score=283, Expect=6e-84]} {Smed: dd_Smed_v6_8286_0_1, dd_Smed_v6_8286_0_1, [Score=266, Expect=6e-77]} {RNA1509_41485, RNA1509_4159} {RNA1310_1645.1, RNA1509_41485, RNA1509_4159} {RNA1509_41485, RNA1509_4159, RNA815_5062} |
| 4. | MligTC455_36809 | 2545 | 53.03 | Mlig455_031988, Mlig455_032040 | Neo: - Age: Up-Down-Up, logFC(26M/2M)=0.264 Regeneration-upregulated BL: 1.259 Regeneration-enriched BL: 1.259 |
0.959 | - | - | - | 0.959 | - | - | Mlig455_031988 {REF} {Length: 5660} {TRANSSPLICED} {Pfam: UBA/TS-N domain [PF00627.33, score=19.0]} {Smed: dd_Smed_v6_2330_0_1, dd_Smed_v6_2330_0_1, [RH, Score=60.5, Expect=4e-09]} {RNA1509_46072, RNA1509_8892} {RNA1310_3692.1, RNA1509_46072} {RNA1509_46072, RNA815_13257.1} Mlig455_032040 {REF} {Length: 5830} {TRANSSPLICED} {Pfam: RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) [PF00076.24, score=20.3]; UBA/TS-N domain [PF00627.33, score=19.2]} {Smed: dd_Smed_v6_2330_0_1, dd_Smed_v6_2330_0_1, [RH, Score=60.5, Expect=4e-09]} {RNA1509_8892} {RNA1310_3692.1, RNA1509_8892} {RNA1509_8892, RNA815_13257.1} |
|
| 5. | MligTC455_49247 | 453 | 9.44 | Mlig455_008628 | Neo: - Age: logFC(26M/2M)=0.514 |
CASKIN1 | 0.958 | - | - | - | 0.958 | - | - | Mlig455_008628 {REF} {Length: 1752} {TRANSSPLICED} {Pfam: Ankyrin repeat [PF00023.32, score=48.1]; Ankyrin repeats (3 copies) [PF12796.9, score=43.6]; Ankyrin repeat [PF13606.8, score=37.5]; Ankyrin repeats (many copies) [PF13637.8, score=35.7]; Ankyrin repeats (many copies) [PF13857.8, score=35.5]} {Human: ENSG00000167971, CASKIN1, CASK interacting protein 1, [Score=54.3, Expect=3e-07]; ENSG00000144031, ANKRD53, ankyrin repeat domain 53, [Score=52.4, Expect=1e-06]} {Mouse: ENSMUSG00000033597, Caskin1, CASK interacting protein 1, [Score=54.7, Expect=2e-07]} {Dmel: FBgn0052343, Atac3, Ada2a-containing complex component 3, [Score=59.3, Expect=3e-09]} {Celegans: WBGene00006780, unc-44, AO66 ankyrin, [Score=52.8, Expect=4e-07]} {Smed: dd_Smed_v6_8140_0_1, dd_Smed_v6_8140_0_1, [RH, Score=57.0, Expect=3e-09]} {RNA1509_38678} {RNA1310_26942} {RNA815_20724} |
| 6. | MligTC455_36808 | 1241 | 25.85 | Mlig455_031991 | Neo: - Age: - |
0.957 | - | - | - | 0.957 | - | - | Mlig455_031991 {REF} {Length: 6075} {TRANSSPLICED} {Pfam: RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) [PF00076.24, score=20.3]; UBA/TS-N domain [PF00627.33, score=19.2]} {Smed: dd_Smed_v6_2330_0_1, dd_Smed_v6_2330_0_1, [RH, Score=60.5, Expect=4e-09]} {RNA1509_12539, RNA1509_17629, RNA1509_49932, RNA1509_50588, RNA1509_8892} {RNA1310_3692.1, RNA1509_12539, RNA1509_17629, RNA1509_49932, RNA1509_50588} {RNA1509_12539, RNA1509_17629, RNA1509_49932, RNA1509_50588, RNA815_13257.1} | |
| 7. | MligTC455_21537 | 1413 | 29.43 | Mlig455_020692 | Neo: - Age: - |
ZNF687 | 0.953 | - | - | - | 0.953 | - | - | Mlig455_020692 {REF} {Length: 6162} {TRANSSPLICED} {Pfam: C2H2-type zinc finger [PF13894.8, score=28.8]; Zinc finger, C2H2 type [PF00096.28, score=26.0]; GAGA factor [PF09237.13, score=19.7]} {Human: ENSG00000143373, ZNF687, zinc finger protein 687, [RH, Score=102, Expect=2e-21]} {Mouse: ENSMUSG00000019338, Zfp687, zinc finger protein 687, [RH, Score=106, Expect=8e-23]} {Dmel: FBgn0004893, bowl, brother of odd with entrails limited, [Score=58.2, Expect=4e-08]} {Celegans: WBGene00003015, lin-29, Transcription factor, [Score=52.4, Expect=1e-06]} {RNA1509_12462, RNA1509_15125, RNA1509_29958, RNA1509_30146, RNA1509_4433} {RNA1310_2143.1, RNA1509_12462, RNA1509_15125, RNA1509_29958, RNA1509_30146, RNA1509_4433} {RNA1509_12462, RNA1509_15125, RNA1509_29958, RNA1509_30146, RNA1509_4433, RNA815_12738} |
| 8. | MligTC455_42505 | 927 | 19.32 | Mlig455_044650 | Neo: - Age: Up-Down-Down |
SPEN | 0.95 | - | - | - | 0.950 | - | - | Mlig455_044650 {REF} {Length: 10984} {Pfam: SPOC domain [PF07744.15, score=106.9]; RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) [PF00076.24, score=84.5]; Occluded RNA-recognition motif [PF16842.7, score=26.0]} {Human: ENSG00000065526, SPEN, spen family transcriptional repressor, [RH, Score=226, Expect=4e-58]} {Mouse: ENSMUSG00000040761, Spen, spen family transcription repressor, [RH, Score=226, Expect=4e-58]} {Dmel: FBgn0016977, spen, split ends, [RH, Score=215, Expect=6e-55]} {Celegans: WBGene00008549, din-1, Daf-12-interacting protein 1, [RH, Score=94.0, Expect=2e-18]} {Smed: dd_Smed_v6_6458_0_1, dd_Smed_v6_6458_0_1, [RH, Score=189, Expect=1e-47]} {RNA1509_1038, RNA1509_14933, RNA1509_22578, RNA1509_24743, RNA1509_30163, RNA1509_44530, RNA1509_56973, RNA1509_59299, RNA1509_7345} {RNA1310_36.2, RNA1509_14933, RNA1509_22578, RNA1509_24743, RNA1509_30163, RNA1509_44530, RNA1509_56973, RNA1509_59299, RNA1509_7345} {RNA1509_14933, RNA1509_22578, RNA1509_24743, RNA1509_30163, RNA1509_44530, RNA1509_56973, RNA1509_59299, RNA1509_7345, RNA815_326} |
| 9. | MligTC455_49194 | 442 | 9.22 | Mlig455_022569 | Neo: - Age: Down-Up-Down |
0.95 | - | - | - | - | 0.950 | - | Mlig455_022569 {REF} {Length: 1947} {TRANSSPLICED} {RNA1509_18442, RNA1509_34885} {RNA1310_8277, RNA1509_34885} {RNA1509_34885, RNA815_6103} | |
| 10. | MligTC455_52285 | 1793 | 37.34 | Mlig455_039524 | Neo: - Age: - |
AGO2 | 0.95 | - | - | - | 0.950 | - | - | Mlig455_039524 {REF} {Length: 4281} {Pfam: Piwi domain [PF02171.19, score=364.5]; N-terminal domain of argonaute [PF16486.7, score=104.8]; PAZ domain [PF02170.24, score=82.1]; Mid domain of argonaute [PF16487.7, score=59.1]; Argonaute linker 2 domain [PF16488.7, score=48.1]; Argonaute linker 1 domain [PF08699.12, score=32.7]} {Human: ENSG00000123908, AGO2, argonaute 2, RISC catalytic component, [Score=1099, Expect=0.0]; ENSG00000092847, AGO1, argonaute 1, RISC catalytic component, [Score=1075, Expect=0.0]; ENSG00000126070, AGO3, argonaute 3, RISC catalytic component, [Score=1068, Expect=0.0]; ENSG00000134698, AGO4, argonaute 4, RISC catalytic component, [Score=1050, Expect=0.0]} {Mouse: ENSMUSG00000036698, Ago2, argonaute RISC catalytic subunit 2, [Score=1102, Expect=0.0]; ENSMUSG00000041530, Ago1, argonaute RISC catalytic subunit 1, [Score=1075, Expect=0.0]; ENSMUSG00000028842, Ago3, argonaute RISC catalytic subunit 3, [Score=1066, Expect=0.0]} {Dmel: FBgn0262739, AGO1, Argonaute-1, [Score=1176, Expect=0.0]} {Celegans: WBGene00000105, alg-1, Argonaute-like, [Score=1100, Expect=0.0]} {Smed: dd_Smed_v6_3861_0_1, dd_Smed_v6_3861_0_1, [Score=1278, Expect=0.0]} {RNA1509_3358} {RNA1310_4477.1} {RNA815_1509.1} |