Data search


search
Exact
Search

Results for MligTC455_49268

Cluster Total UMI counts Global CPM Transcripts Categories Human homolog Annotation
MligTC455_49268 2079 43.32 Mlig455_062583

Neo: Int S/G2/M

Age: logFC(26M/2M)=0.294

Region-enriched R5: 1.458/0.00000

SRP9 Mlig455_062583 {REF} {Length: 1976} {TRANSSPLICED} {Pfam: Signal recognition particle 9 kDa protein (SRP9) [PF05486.14, score=46.3]} {Human: ENSG00000143742, SRP9, signal recognition particle 9, [RH, Score=75.1, Expect=4e-19]} {Mouse: ENSMUSG00000026511, Srp9, signal recognition particle 9, [RH, Score=73.6, Expect=9e-19]} {Celegans: WBGene00013984, ZK512.4, Signal recognition particle 9 kDa protein, [RH, Score=73.2, Expect=6e-19]} {Smed: dd_Smed_v6_739_0_1, dd_Smed_v6_739_0_1, [RH, Score=88.2, Expect=6e-25]} {RNA1509_18191, RNA1509_21028, RNA1509_35416, RNA1509_51607} {RNA1310_28679.1, RNA1509_18191, RNA1509_21028, RNA1509_35416, RNA1509_51607} {RNA1509_18191, RNA1509_21028, RNA1509_35416, RNA1509_51607, RNA815_21839.1}

Cumulative graph for MligTC455_49268

Region-enriched expression

Region logFC logCPM Pvalue FDR Specificity
RegionR1 0.235 5.477 0.69703 1.00000
RegionR2 -0.49 5.477 0.18823 0.54267
RegionR3 -0.116 5.477 0.70589 1.00000
RegionR4 0.189 5.477 0.57083 0.88902
RegionR5 1.458 5.477 0.00000 0.00000
RegionR6 0.545 5.477 0.06135 0.46415
RegionR7 -0.511 5.477 0.17245 0.76275
RegionR8 -1.31 5.477 0.00786 0.16499

Regeneration-enriched expression

Region logFC logCPM PValue FDR Specificity
RegenerationR1 -0.26 5.477 0.73832 1.00000
RegenerationR2 0.119 5.477 0.73926 0.96951
RegenerationR3 0.115 5.477 0.75717 0.96695
RegenerationR4 -0.027 5.477 0.93984 1.00000
RegenerationR5 -0.216 5.477 0.51794 0.86842
RegenerationR6 -0.139 5.477 0.69990 0.92423
RegenerationBL 0.136 5.477 0.74152 1.00000
RegenerationTP 0.753 5.477 0.08865 0.46923


Genes with expression patterns similar to MligTC455_49268

Nr. Cluster Total UMI counts Global CPM Transcripts Categories Human homolog Σ Spearman correlations Int1 Int2 Int3 Reg1 Reg2 Reg3 Annotation
1. MligTC455_49268 2079 43.32 Mlig455_062583

Neo: Int S/G2/M

Age: logFC(26M/2M)=0.294

Region-enriched R5: 1.458/0.00000

SRP9 6 1.000 1.000 1.000 1.000 1.000 1.000 Mlig455_062583 {REF} {Length: 1976} {TRANSSPLICED} {Pfam: Signal recognition particle 9 kDa protein (SRP9) [PF05486.14, score=46.3]} {Human: ENSG00000143742, SRP9, signal recognition particle 9, [RH, Score=75.1, Expect=4e-19]} {Mouse: ENSMUSG00000026511, Srp9, signal recognition particle 9, [RH, Score=73.6, Expect=9e-19]} {Celegans: WBGene00013984, ZK512.4, Signal recognition particle 9 kDa protein, [RH, Score=73.2, Expect=6e-19]} {Smed: dd_Smed_v6_739_0_1, dd_Smed_v6_739_0_1, [RH, Score=88.2, Expect=6e-25]} {RNA1509_18191, RNA1509_21028, RNA1509_35416, RNA1509_51607} {RNA1310_28679.1, RNA1509_18191, RNA1509_21028, RNA1509_35416, RNA1509_51607} {RNA1509_18191, RNA1509_21028, RNA1509_35416, RNA1509_51607, RNA815_21839.1}
2. MligTC455_11508 1604 33.41 Mlig455_027154

Neo: -

Age: Down-Down-Up

Region-enriched R5: 1.433/0.00000

3.295 0.727 0.807 0.785 - - 0.976 Mlig455_027154 {REF} {Length: 633} {TRANSSPLICED} {RNA1509_27290} {RNA1310_22802} {RNA815_17747.1}
3. MligTC455_46300 592 12.33 Mlig455_029207

Neo: Int S/G2/M

Age: -

Region-enriched R5: 1.553/0.00026

2.642 - - 0.824 - 0.852 0.966 Mlig455_029207 {REF} {Length: 1314} {TRANSSPLICED} {NoTransDecoderORF} {RNA1509_30245, RNA1509_35999, RNA1509_52366} {RNA1310_3145, RNA1509_30245, RNA1509_35999, RNA1509_52366} {RNA1509_30245, RNA1509_35999, RNA1509_52366, RNA815_27045}
4. MligTC455_47022 591 12.32 Mlig455_049547

Neo: Int S/G2/M

Age: Down-Down-Up

Region-enriched R5: 2.458/0.00000

NUP35 2.596 - 0.902 0.723 - - 0.971 Mlig455_049547 {REF} {Length: 2878} {Pfam: Nup53/35/40-type RNA recognition motif [PF05172.15, score=62.0]; Nup53/35/40-type RNA recognition motif [PF14605.8, score=39.2]} {Human: ENSG00000163002, NUP35, nucleoporin 35, [RH, Score=110, Expect=8e-27]} {Mouse: ENSMUSG00000026999, Nup35, nucleoporin 35, [RH, Score=115, Expect=1e-28]; ENSMUSG00000091900, Gm4353, predicted gene 4353, [RH, Score=115, Expect=1e-28]} {Dmel: FBgn0030943, CG6540, [RH, Score=76.3, Expect=5e-15]} {Celegans: WBGene00003805, npp-19, Nucleoporin NUP53, [RH, Score=62.4, Expect=2e-10]} {Smed: dd_Smed_v6_10329_0_1, dd_Smed_v6_10329_0_1, [RH, Score=75.9, Expect=4e-15]} {RNA1509_29514, RNA1509_36308} {RNA1310_9308.1, RNA1509_29514, RNA1509_36308} {RNA1509_29514, RNA1509_36308, RNA815_19261}
5. MligTC455_13659 277 5.77 Mlig455_060046, Mlig455_063498

Neo: Irradiation

Age: Up-Up-Up, logFC(26M/2M)=0.925

Region-enriched R5: 4.130/0.00000

2.519 - 0.704 0.857 - - 0.958

Mlig455_060046 {REF} {Length: 4212} {RNA1509_57337} {RNA1310_9265, RNA1509_57337} {RNA1509_57337, RNA815_13115}

Mlig455_063498 {REF} {Length: 1365} {NoTransDecoderORF} {RNA1509_57337} {RNA1310_54209} {RNA815_29261}
6. MligTC455_35558 1840 38.32 Mlig455_023540

Neo: Irradiation

Age: logFC(26M/2M)=0.247

Region-enriched R5: 2.341/0.00000

SYTL4 2.445 - - 0.703 - 0.782 0.960 Mlig455_023540 {REF} {Length: 3619} {Pfam: C2 domain [PF00168.32, score=93.7]; FYVE-type zinc finger [PF02318.18, score=34.3]; Nuclear RNA-splicing-associated protein [PF10500.11, score=24.0]; Proline-rich membrane anchor 1 [PF16101.7, score=20.5]} {Human: ENSG00000102362, SYTL4, synaptotagmin like 4, [RH, Score=206, Expect=6e-56]} {Mouse: ENSMUSG00000031255, Sytl4, synaptotagmin-like 4, [RH, Score=206, Expect=6e-56]} {Dmel: FBgn0266756, btsz, bitesize, [Score=189, Expect=8e-49]} {Celegans: WBGene00004316, rbf-1, Rabphilin-1, [Score=80.1, Expect=4e-15]} {Smed: dd_Smed_v6_4335_0_1, dd_Smed_v6_4335_0_1, [RH, Score=190, Expect=2e-51]} {RNA1509_13768, RNA1509_5480} {RNA1310_4613, RNA1509_13768, RNA1509_5480} {RNA1509_13768, RNA1509_5480, RNA815_6873}
7. MligTC455_52415 654 13.61 Mlig455_044484

Neo: Irradiation

Age: -

Region-enriched R5: 1.061/0.00047

2.414 - 0.758 0.705 - - 0.951 Mlig455_044484 {REF} {Length: 2469} {TRANSSPLICED} {RNA1509_36525} {RNA1310_44640.1} {RNA815_18660}
8. MligTC455_49426 990 20.63 Mlig455_046826

Neo: Irradiation

Age: -

Region-enriched R5: 1.926/0.00000

Regeneration-upregulated BL: 1.864

Regeneration-enriched BL: 1.864

CNOT9 1.809 - - 0.842 - - 0.967 Mlig455_046826 {REF} {Length: 1688} {Pfam: Cell differentiation family, Rcd1-like [PF04078.15, score=257.2]} {Human: ENSG00000144580, CNOT9, CCR4-NOT transcription complex subunit 9, [Score=260, Expect=6e-87]} {Mouse: ENSMUSG00000026174, Cnot9, CCR4-NOT transcription complex, subunit 9, [Score=260, Expect=4e-87]} {Dmel: FBgn0031047, Rcd-1, Required for cell differentiation 1, [Score=239, Expect=6e-79]} {Celegans: WBGene00016139, ntl-9, NOT-Like (Yeast CCR4/NOT complex component), [Score=213, Expect=1e-68]} {Smed: dd_Smed_v6_2344_0_1, dd_Smed_v6_2344_0_1, [Score=269, Expect=3e-90]} {RNA1509_5386} {RNA1310_13428.2} {RNA815_5416.2}
9. MligTC455_39007 2184 45.51 Mlig455_062119, Mlig455_069663

Neo: Neoblast, stringent

Age: -

Region-enriched R5: 1.418/0.00014

Regeneration-upregulated BL: 1.963

Regeneration-enriched BL: 1.963

NUP210, NUP210L 1.71 - - 0.757 - - 0.953

Mlig455_062119 {REF} {Length: 7147} {Pfam: Bacterial Ig-like domain (group 2) [PF02368.20, score=26.5]} {Human: ENSG00000132182, NUP210, nucleoporin 210, [RH, Score=536, Expect=2e-159]} {Mouse: ENSMUSG00000027939, Nup210l, nucleoporin 210-like, [RH, Score=506, Expect=2e-149]} {Dmel: FBgn0266580, Gp210, Glycoprotein 210 kDa, [RH, Score=243, Expect=2e-64]} {Celegans: WBGene00003798, npp-12, Nuclear Pore complex Protein, [Score=248, Expect=5e-66]} {Smed: dd_Smed_v6_4698_0_1, dd_Smed_v6_4698_0_1, [RH, Score=549, Expect=1e-163]} {RNA1509_2772} {RNA1310_410.1} {RNA815_6899}

Mlig455_069663 {REF} {Length: 6507} {Pfam: Bacterial Ig-like domain (group 2) [PF02368.20, score=22.5]} {Human: ENSG00000143552, NUP210L, nucleoporin 210 like, [Score=473, Expect=8e-137]} {Mouse: ENSMUSG00000027939, Nup210l, nucleoporin 210-like, [RH, Score=506, Expect=5e-148]} {Dmel: FBgn0266580, Gp210, Glycoprotein 210 kDa, [Score=224, Expect=2e-58]} {Celegans: WBGene00003798, npp-12, Nuclear Pore complex Protein, [RH, Score=226, Expect=6e-59]} {Smed: dd_Smed_v6_4698_0_1, dd_Smed_v6_4698_0_1, [Score=538, Expect=2e-158]} {RNA1509_2772} {RNA1310_410.1} {RNA815_6899}
10. MligTC455_50240 919 19.14 Mlig455_027856

Neo: -

Age: -

Region-enriched R5: 1.437/0.00000

1.689 - - 0.734 - - 0.955 Mlig455_027856 {REF} {Length: 2968} {Pfam: Glycosyltransferase family 92 [PF01697.29, score=120.8]} {Dmel: FBgn0033502, CG12910, [RH, Score=107, Expect=1e-24]} {Celegans: WBGene00015870, C17A2.2, [RH, Score=63.5, Expect=1e-10]} {Smed: dd_Smed_v6_5401_0_1, dd_Smed_v6_5401_0_1, [Score=123, Expect=1e-30]} {RNA1509_43884, RNA1509_56545, RNA1509_8290} {RNA1310_3360.1, RNA1509_43884, RNA1509_56545, RNA1509_8290} {RNA1509_43884, RNA1509_56545, RNA1509_8290, RNA815_7043}
11. MligTC455_25154 3681 76.69 Mlig455_004229

Neo: Neoblast

Age: Down-Up-Up, logFC(26M/2M)=0.530

Region-enriched R5: 1.623/0.00003

CACYBP 0.965 - - - - - 0.965 Mlig455_004229 {REF} {Length: 989} {TRANSSPLICED} {Pfam: Siah interacting protein, N terminal [PF09032.13, score=48.9]; CS domain [PF04969.18, score=29.3]; SGS domain [PF05002.17, score=22.5]} {Human: ENSG00000116161, CACYBP, calcyclin binding protein, [RH, Score=126, Expect=3e-35]} {Mouse: ENSMUSG00000014226, Cacybp, calcyclin binding protein, [RH, Score=132, Expect=1e-37]} {Dmel: FBgn0029882, CG3226, [RH, Score=103, Expect=1e-26]} {Smed: dd_Smed_v6_377_0_1, dd_Smed_v6_377_0_1, [RH, Score=141, Expect=1e-41]} {RNA1509_50470, RNA1509_5146, RNA1509_6615, RNA1509_8696} {RNA1310_34115, RNA1509_50470, RNA1509_5146, RNA1509_6615, RNA1509_8696} {RNA1509_50470, RNA1509_5146, RNA1509_6615, RNA1509_8696, RNA815_17093}
12. MligTC455_41761 655 13.65 Mlig455_020225

Neo: Irradiation

Age: -

Region-enriched R5: 1.227/0.00118

PTPRZ1 0.96 - - - - - 0.960 Mlig455_020225 {REF} {Length: 5464} {TRANSSPLICED} {Pfam: Protein-tyrosine phosphatase [PF00102.29, score=409.3]; Fibronectin type III domain [PF00041.23, score=83.6]; Dual specificity phosphatase, catalytic domain [PF00782.22, score=24.2]} {Human: ENSG00000106278, PTPRZ1, protein tyrosine phosphatase, receptor type Z1, [RH, Score=492, Expect=4e-149]; ENSG00000144724, PTPRG, protein tyrosine phosphatase, receptor type G, [RH, Score=492, Expect=4e-149]} {Mouse: ENSMUSG00000068748, Ptprz1, protein tyrosine phosphatase, receptor type Z, polypeptide 1, [RH, Score=491, Expect=6e-145]; ENSMUSG00000021745, Ptprg, protein tyrosine phosphatase, receptor type, G, [RH, Score=485, Expect=1e-146]} {Dmel: FBgn0004369, Ptp99A, Protein tyrosine phosphatase 99A, [RH, Score=469, Expect=9e-143]} {Celegans: WBGene00004215, ptp-3, Tyrosine-protein phosphatase Lar-like, [Score=348, Expect=9e-101]} {Smed: dd_Smed_v6_6997_0_1, dd_Smed_v6_6997_0_1, [RH, Score=564, Expect=9e-177]} {RNA1509_4639} {RNA1310_810} {RNA815_3651}
13. MligTC455_18494 2271 47.32 Mlig455_029066

Neo: Neoblast

Age: logFC(26M/2M)=0.184

TUFM 0.954 - - - 0.954 - - Mlig455_029066 {REF} {Length: 2427} {TRANSSPLICED} {Pfam: Elongation factor Tu GTP binding domain [PF00009.29, score=180.2]; Elongation factor Tu C-terminal domain [PF03143.19, score=58.7]; Elongation factor Tu domain 2 [PF03144.27, score=54.3]; 50S ribosome-binding GTPase [PF01926.25, score=22.2]} {Human: ENSG00000178952, TUFM, Tu translation elongation factor, mitochondrial, [RH, Score=467, Expect=1e-162]} {Mouse: ENSMUSG00000073838, Tufm, Tu translation elongation factor, mitochondrial, [RH, Score=469, Expect=1e-163]} {Dmel: FBgn0024556, mEFTu1, mitochondrial translation elongation factor Tu 1, [RH, Score=501, Expect=6e-176]} {Celegans: WBGene00007000, tufm-1, Elongation factor Tu homologue; TU elongation Factor (EF-Tu), Mitochondrial, [RH, Score=421, Expect=1e-144]} {Smed: dd_Smed_v6_818_0_1, dd_Smed_v6_818_0_1, [RH, Score=561, Expect=0.0]} {RNA1509_3737, RNA1509_7292} {RNA1310_17460.1, RNA1509_3737, RNA1509_7292} {RNA1509_3737, RNA1509_7292, RNA815_6907}

Refine r cutoff to:    Show

Berezikov Lab - 2020-2021 © ERIBA