Data search


search
Exact
Search

Results for MligTC455_47022

Cluster Total UMI counts Global CPM Transcripts Categories Human homolog Annotation
MligTC455_47022 591 12.32 Mlig455_049547

Neo: Int S/G2/M

Age: Down-Down-Up

Region-enriched R5: 2.458/0.00000

NUP35 Mlig455_049547 {REF} {Length: 2878} {Pfam: Nup53/35/40-type RNA recognition motif [PF05172.15, score=62.0]; Nup53/35/40-type RNA recognition motif [PF14605.8, score=39.2]} {Human: ENSG00000163002, NUP35, nucleoporin 35, [RH, Score=110, Expect=8e-27]} {Mouse: ENSMUSG00000026999, Nup35, nucleoporin 35, [RH, Score=115, Expect=1e-28]; ENSMUSG00000091900, Gm4353, predicted gene 4353, [RH, Score=115, Expect=1e-28]} {Dmel: FBgn0030943, CG6540, [RH, Score=76.3, Expect=5e-15]} {Celegans: WBGene00003805, npp-19, Nucleoporin NUP53, [RH, Score=62.4, Expect=2e-10]} {Smed: dd_Smed_v6_10329_0_1, dd_Smed_v6_10329_0_1, [RH, Score=75.9, Expect=4e-15]} {RNA1509_29514, RNA1509_36308} {RNA1310_9308.1, RNA1509_29514, RNA1509_36308} {RNA1509_29514, RNA1509_36308, RNA815_19261}

Cumulative graph for MligTC455_47022

Region-enriched expression

Region logFC logCPM Pvalue FDR Specificity
RegionR1 -2.451 3.877 0.07628 0.60851
RegionR2 1.253 3.877 0.07205 0.32761
RegionR3 0.247 3.877 0.65592 1.00000
RegionR4 -1.007 3.877 0.08858 0.28342
RegionR5 2.458 3.877 0.00000 0.00000
RegionR6 1.526 3.877 0.00266 0.07326
RegionR7 0.219 3.877 0.74775 1.00000
RegionR8 -2.245 3.877 0.05379 0.45237

Regeneration-enriched expression

Region logFC logCPM PValue FDR Specificity
RegenerationR1 1.425 3.877 0.48251 1.00000
RegenerationR2 0.22 3.877 0.69066 0.95308
RegenerationR3 1.649 3.877 0.00646 0.14567
RegenerationR4 1.822 3.877 0.00268 0.06738
RegenerationR5 0.331 3.877 0.49419 0.85544
RegenerationR6 1.032 3.877 0.05912 0.30517
RegenerationBL 1.784 3.877 0.01089 0.10572
RegenerationTP 2.688 3.877 0.00079 0.04214


Genes with expression patterns similar to MligTC455_47022

Nr. Cluster Total UMI counts Global CPM Transcripts Categories Human homolog Σ Spearman correlations Int1 Int2 Int3 Reg1 Reg2 Reg3 Annotation
1. MligTC455_47022 591 12.32 Mlig455_049547

Neo: Int S/G2/M

Age: Down-Down-Up

Region-enriched R5: 2.458/0.00000

NUP35 6 1.000 1.000 1.000 1.000 1.000 1.000 Mlig455_049547 {REF} {Length: 2878} {Pfam: Nup53/35/40-type RNA recognition motif [PF05172.15, score=62.0]; Nup53/35/40-type RNA recognition motif [PF14605.8, score=39.2]} {Human: ENSG00000163002, NUP35, nucleoporin 35, [RH, Score=110, Expect=8e-27]} {Mouse: ENSMUSG00000026999, Nup35, nucleoporin 35, [RH, Score=115, Expect=1e-28]; ENSMUSG00000091900, Gm4353, predicted gene 4353, [RH, Score=115, Expect=1e-28]} {Dmel: FBgn0030943, CG6540, [RH, Score=76.3, Expect=5e-15]} {Celegans: WBGene00003805, npp-19, Nucleoporin NUP53, [RH, Score=62.4, Expect=2e-10]} {Smed: dd_Smed_v6_10329_0_1, dd_Smed_v6_10329_0_1, [RH, Score=75.9, Expect=4e-15]} {RNA1509_29514, RNA1509_36308} {RNA1310_9308.1, RNA1509_29514, RNA1509_36308} {RNA1509_29514, RNA1509_36308, RNA815_19261}
2. MligTC455_43936 1101 22.94 Mlig455_061698, Mlig455_063087

Neo: Int S/G2/M

Age: logFC(26M/2M)=0.462

Region-enriched R5: 2.379/0.00000

3.418 0.880 - 0.969 0.731 - 0.838

Mlig455_061698 {REF} {Length: 2311} {TRANSSPLICED} {RNA1509_44862, RNA1509_7216} {RNA1310_10758.1, RNA1509_44862} {RNA1509_44862, RNA815_5923}

Mlig455_063087 {REF} {Length: 2275} {TRANSSPLICED} {RNA1509_7216} {RNA1310_10758.1} {RNA815_5923}
3. MligTC455_44338 719 14.98 Mlig455_041655

Neo: Irradiation

Age: -

Region-enriched R5: 2.104/0.00000

TECTB 2.615 0.952 0.720 0.943 - - - Mlig455_041655 {REF} {Length: 2872} {TRANSSPLICED} {Pfam: Zona pellucida-like domain [PF00100.25, score=93.9]} {Human: ENSG00000119913, TECTB, tectorin beta, [RH, Score=50.4, Expect=4e-06]} {Mouse: ENSMUSG00000024979, Tectb, tectorin beta, [RH, Score=48.9, Expect=3e-06]} {RNA1509_39057, RNA1509_7245} {RNA1310_6151.1, RNA1509_39057, RNA1509_7245} {RNA1509_39057, RNA1509_7245, RNA815_1844}
4. MligTC455_49268 2079 43.32 Mlig455_062583

Neo: Int S/G2/M

Age: logFC(26M/2M)=0.294

Region-enriched R5: 1.458/0.00000

SRP9 2.596 - 0.902 0.723 - - 0.971 Mlig455_062583 {REF} {Length: 1976} {TRANSSPLICED} {Pfam: Signal recognition particle 9 kDa protein (SRP9) [PF05486.14, score=46.3]} {Human: ENSG00000143742, SRP9, signal recognition particle 9, [RH, Score=75.1, Expect=4e-19]} {Mouse: ENSMUSG00000026511, Srp9, signal recognition particle 9, [RH, Score=73.6, Expect=9e-19]} {Celegans: WBGene00013984, ZK512.4, Signal recognition particle 9 kDa protein, [RH, Score=73.2, Expect=6e-19]} {Smed: dd_Smed_v6_739_0_1, dd_Smed_v6_739_0_1, [RH, Score=88.2, Expect=6e-25]} {RNA1509_18191, RNA1509_21028, RNA1509_35416, RNA1509_51607} {RNA1310_28679.1, RNA1509_18191, RNA1509_21028, RNA1509_35416, RNA1509_51607} {RNA1509_18191, RNA1509_21028, RNA1509_35416, RNA1509_51607, RNA815_21839.1}
5. MligTC455_22815 529 11.01 Mlig455_038811

Neo: Int S/G2/M

Age: logFC(26M/2M)=0.353

Region-enriched R5: 1.481/0.00573

PDCD2 2.507 - 0.705 0.951 0.851 - - Mlig455_038811 {REF} {Length: 2963} {Pfam: Programmed cell death protein 2, C-terminal putative domain [PF04194.15, score=100.5]} {Human: ENSG00000071994, PDCD2, programmed cell death 2, [RH, Score=89.4, Expect=3e-19]} {Mouse: ENSMUSG00000014771, Pdcd2, programmed cell death 2, [RH, Score=104, Expect=6e-25]} {Dmel: FBgn0021875, Zfrp8, Zinc finger protein RP-8, [RH, Score=111, Expect=7e-27]} {Celegans: WBGene00011116, pdcd-2, Vacuolar ATPase assembly integral membrane protein VMA21 homolog, [RH, Score=86.7, Expect=3e-18]} {RNA1509_24796, RNA1509_46537} {RNA1310_18277, RNA1509_46537} {RNA1509_46537, RNA815_12771}
6. MligTC455_49426 990 20.63 Mlig455_046826

Neo: Irradiation

Age: -

Region-enriched R5: 1.926/0.00000

Regeneration-upregulated BL: 1.864

Regeneration-enriched BL: 1.864

CNOT9 1.837 0.880 - - - - 0.957 Mlig455_046826 {REF} {Length: 1688} {Pfam: Cell differentiation family, Rcd1-like [PF04078.15, score=257.2]} {Human: ENSG00000144580, CNOT9, CCR4-NOT transcription complex subunit 9, [Score=260, Expect=6e-87]} {Mouse: ENSMUSG00000026174, Cnot9, CCR4-NOT transcription complex, subunit 9, [Score=260, Expect=4e-87]} {Dmel: FBgn0031047, Rcd-1, Required for cell differentiation 1, [Score=239, Expect=6e-79]} {Celegans: WBGene00016139, ntl-9, NOT-Like (Yeast CCR4/NOT complex component), [Score=213, Expect=1e-68]} {Smed: dd_Smed_v6_2344_0_1, dd_Smed_v6_2344_0_1, [Score=269, Expect=3e-90]} {RNA1509_5386} {RNA1310_13428.2} {RNA815_5416.2}
7. MligTC455_20452 725 15.1 Mlig455_068384, Mlig455_068393

Neo: Int S/G2/M

Age: Down-Up-Up, logFC(26M/2M)=0.348

Region-specific R5: 3.269

Region-enriched R5: 2.907/0.00000
Region-enriched R4: 2.349/0.01316

1.826 - - 0.950 0.876 - -

Mlig455_068384 {REF} {Length: 3173} {RNA1509_25509} {RNA1310_31646} {RNA815_14776.1}

Mlig455_068393 {REF} {Length: 1739} {TRANSSPLICED} {RNA1509_25509, RNA1509_60017} {RNA1310_31646, RNA1509_25509, RNA1509_60017} {RNA1509_25509, RNA1509_60017, RNA815_14776.1}
8. MligTC455_27379 321 6.69 Mlig455_025230

Neo: Int S/G2/M

Age: Up-Down-Up

Region-enriched R5: 1.557/0.00520

1.801 - - 0.850 - 0.951 - Mlig455_025230 {REF} {Length: 4138} {TRANSSPLICED} {RNA1509_24579} {RNA1310_5913.1} {RNA815_3696}
9. MligTC455_16933 502 10.45 Mlig455_022729

Neo: Irradiation

Age: -

Region-enriched R5: 1.943/0.00000

KIF23 1.703 - - 0.965 - 0.738 - Mlig455_022729 {REF} {Length: 3615} {TRANSSPLICED} {Pfam: Kinesin motor domain [PF00225.25, score=298.5]; Arf6-interacting domain of mitotic kinesin-like protein 1 [PF16540.7, score=92.9]; Microtubule binding [PF16796.7, score=60.9]} {Human: ENSG00000137807, KIF23, kinesin family member 23, [RH, Score=428, Expect=1e-136]} {Mouse: ENSMUSG00000032254, Kif23, kinesin family member 23, [RH, Score=384, Expect=5e-119]} {Dmel: FBgn0011692, pav, pavarotti, [RH, Score=434, Expect=6e-139]} {Celegans: WBGene00006974, zen-4, Kinesin-like protein, [RH, Score=377, Expect=8e-119]} {Smed: dd_Smed_v6_9585_0_1, dd_Smed_v6_9585_0_1, [RH, Score=276, Expect=9e-82]} {RNA1509_39292} {RNA1310_6447.1, RNA1509_39292} {RNA1509_39292, RNA815_8976}
10. MligTC455_27382 716 14.93 Mlig455_025254, Mlig455_025632

Neo: -

Age: -

Region-enriched R5: 1.621/0.00178

Regeneration-upregulated TP: 2.721

Regeneration-enriched TP: 2.721

APEH 1.68 - - 0.724 - 0.956 -

Mlig455_025254 {REF} {Length: 4964} {TRANSSPLICED} {Pfam: Prolyl oligopeptidase family [PF00326.23, score=162.9]; Dienelactone hydrolase family [PF01738.20, score=25.5]; X-Pro dipeptidyl-peptidase (S15 family) [PF02129.20, score=21.5]; Pectinacetylesterase [PF03283.15, score=18.6]} {Human: ENSG00000164062, APEH, acylaminoacyl-peptide hydrolase, [Score=82.0, Expect=3e-15]} {Mouse: ENSMUSG00000032590, Apeh, acylpeptide hydrolase, [Score=90.1, Expect=7e-18]} {Celegans: WBGene00001057, dpf-4, Dipeptidyl Peptidase Four (IV) family, [Score=330, Expect=7e-100]} {Smed: dd_Smed_v6_3723_0_1, dd_Smed_v6_3723_0_1, [Score=390, Expect=5e-122]} {RNA1509_3789} {RNA1310_6314.1} {RNA815_1799}

Mlig455_025632 {REF} {Length: 7313} {Pfam: Prolyl oligopeptidase family [PF00326.23, score=162.0]; Integrase zinc binding domain [PF17921.3, score=27.1]; gag-polyprotein putative aspartyl protease [PF13975.8, score=25.0]; Dienelactone hydrolase family [PF01738.20, score=24.7]; Aspartyl protease [PF13650.8, score=21.1]; X-Pro dipeptidyl-peptidase (S15 family) [PF02129.20, score=20.2]} {Human: ENSG00000164062, APEH, acylaminoacyl-peptide hydrolase, [Score=82.0, Expect=6e-15]} {Mouse: ENSMUSG00000032590, Apeh, acylpeptide hydrolase, [Score=90.1, Expect=1e-17]} {Celegans: WBGene00001057, dpf-4, Dipeptidyl Peptidase Four (IV) family, [RH, Score=371, Expect=3e-112]} {Smed: dd_Smed_v6_3723_0_1, dd_Smed_v6_3723_0_1, [RH, Score=473, Expect=3e-149]} {RNA1509_3789} {RNA1310_6314.1} {RNA815_1799}
11. MligTC455_25954 1082 22.55 Mlig455_013581, Mlig455_013633, Mlig455_061452

Neo: Int S/G2/M

Age: -

1.665 0.705 - 0.960 - - -

Mlig455_013581 {REF} {Length: 3748} {TRANSSPLICED} {Pfam: PTB domain (IRS-1 type) [PF02174.19, score=22.7]} {RNA1509_27081} {RNA1310_19348.1} {RNA815_9481}

Mlig455_013633 {REF} {Length: 3545} {TRANSSPLICED} {Pfam: PTB domain (IRS-1 type) [PF02174.19, score=22.7]} {RNA1509_41932} {RNA1310_19348.1, RNA1509_41932} {RNA1509_41932, RNA815_9481}

Mlig455_061452 {REF} {Length: 3602} {TRANSSPLICED} {Pfam: PTB domain (IRS-1 type) [PF02174.19, score=22.7]} {RNA1509_27081} {RNA1310_19348.1} {RNA815_9481}
12. MligTC455_35558 1840 38.32 Mlig455_023540

Neo: Irradiation

Age: logFC(26M/2M)=0.247

Region-enriched R5: 2.341/0.00000

SYTL4 0.976 - - - - - 0.976 Mlig455_023540 {REF} {Length: 3619} {Pfam: C2 domain [PF00168.32, score=93.7]; FYVE-type zinc finger [PF02318.18, score=34.3]; Nuclear RNA-splicing-associated protein [PF10500.11, score=24.0]; Proline-rich membrane anchor 1 [PF16101.7, score=20.5]} {Human: ENSG00000102362, SYTL4, synaptotagmin like 4, [RH, Score=206, Expect=6e-56]} {Mouse: ENSMUSG00000031255, Sytl4, synaptotagmin-like 4, [RH, Score=206, Expect=6e-56]} {Dmel: FBgn0266756, btsz, bitesize, [Score=189, Expect=8e-49]} {Celegans: WBGene00004316, rbf-1, Rabphilin-1, [Score=80.1, Expect=4e-15]} {Smed: dd_Smed_v6_4335_0_1, dd_Smed_v6_4335_0_1, [RH, Score=190, Expect=2e-51]} {RNA1509_13768, RNA1509_5480} {RNA1310_4613, RNA1509_13768, RNA1509_5480} {RNA1509_13768, RNA1509_5480, RNA815_6873}
13. MligTC455_20224 1225 25.53 Mlig455_009689, Mlig455_063053

Neo: -

Age: -

NAGK 0.974 - - 0.974 - - -

Mlig455_009689 {REF} {Length: 1932} {TRANSSPLICED} {Pfam: BadF/BadG/BcrA/BcrD ATPase family [PF01869.22, score=65.2]} {Human: ENSG00000124357, NAGK, N-acetylglucosamine kinase, [RH, Score=201, Expect=6e-61]} {Mouse: ENSMUSG00000034744, Nagk, N-acetylglucosamine kinase, [RH, Score=205, Expect=2e-62]} {Dmel: FBgn0038321, CG6218, [RH, Score=193, Expect=4e-58]} {Celegans: WBGene00021057, W06B4.2, [RH, Score=133, Expect=2e-34]} {Smed: dd_Smed_v6_643_0_1, dd_Smed_v6_643_0_1, [RH, Score=132, Expect=3e-35]} {RNA1509_32084, RNA1509_59002} {RNA1310_24603, RNA1509_32084, RNA1509_59002} {RNA1509_32084, RNA1509_59002, RNA815_11105}

Mlig455_063053 {REF} {Length: 2927} {TRANSSPLICED} {Pfam: BadF/BadG/BcrA/BcrD ATPase family [PF01869.22, score=65.3]} {Human: ENSG00000124357, NAGK, N-acetylglucosamine kinase, [RH, Score=200, Expect=2e-60]} {Mouse: ENSMUSG00000034744, Nagk, N-acetylglucosamine kinase, [RH, Score=204, Expect=5e-62]} {Dmel: FBgn0038321, CG6218, [RH, Score=192, Expect=1e-57]} {Celegans: WBGene00021057, W06B4.2, [RH, Score=134, Expect=1e-34]} {Smed: dd_Smed_v6_643_0_1, dd_Smed_v6_643_0_1, [RH, Score=134, Expect=8e-36]} {RNA1509_33354} {RNA1310_24603} {RNA815_11105}
14. MligTC455_48976 3958 82.46 Mlig455_004420

Neo: -

Age: -

Region-enriched R5: 1.033/0.00324
Region-enriched R4: 1.008/0.02346

SNRPF 0.974 - - - - 0.974 - Mlig455_004420 {REF} {Length: 622} {TRANSSPLICED} {Pfam: LSM domain [PF01423.24, score=76.3]; Ataxin 2 SM domain [PF14438.8, score=19.3]} {Human: ENSG00000139343, SNRPF, small nuclear ribonucleoprotein polypeptide F, [Score=123, Expect=5e-38]} {Mouse: ENSMUSG00000020018, Snrpf, small nuclear ribonucleoprotein polypeptide F, [Score=123, Expect=4e-38]} {Dmel: FBgn0000426, SmF, Small ribonucleoprotein particle protein SmF, [RH, Score=123, Expect=3e-38]} {Celegans: WBGene00004918, snr-5, Probable small nuclear ribonucleoprotein F, [RH, Score=123, Expect=2e-38]} {Smed: dd_Smed_v6_1056_0_1, dd_Smed_v6_1056_0_1, [Score=135, Expect=4e-43]} {RNA1509_17054, RNA1509_36621} {RNA1310_37237.1, RNA1509_17054, RNA1509_36621} {RNA1509_17054, RNA1509_36621, RNA815_25270.1}
15. MligTC455_48977 4051 84.39 Mlig455_037261

Neo: Int S/G2/M

Age: logFC(26M/2M)=0.540

Region-enriched R5: 1.037/0.00266

SNRPF 0.969 - - - - 0.969 - Mlig455_037261 {REF} {Length: 790} {TRANSSPLICED} {Pfam: LSM domain [PF01423.24, score=76.3]; Ataxin 2 SM domain [PF14438.8, score=19.3]} {Human: ENSG00000139343, SNRPF, small nuclear ribonucleoprotein polypeptide F, [RH, Score=123, Expect=6e-38]} {Mouse: ENSMUSG00000020018, Snrpf, small nuclear ribonucleoprotein polypeptide F, [RH, Score=123, Expect=4e-38]} {Dmel: FBgn0000426, SmF, Small ribonucleoprotein particle protein SmF, [RH, Score=122, Expect=6e-38]} {Celegans: WBGene00004918, snr-5, Probable small nuclear ribonucleoprotein F, [RH, Score=123, Expect=2e-38]} {Smed: dd_Smed_v6_1056_0_1, dd_Smed_v6_1056_0_1, [RH, Score=136, Expect=1e-43]} {RNA1509_17908, RNA1509_9741} {RNA1310_69914, RNA1509_17908, RNA1509_9741} {RNA1509_17908, RNA1509_9741, RNA815_25270.1}
16. MligTC455_54088 830 17.29 Mlig455_018243

Neo: Int S/G2/M

Age: logFC(26M/2M)=0.349

Region-enriched R5: 1.438/0.00423

RNF4 0.963 - - - - - 0.963 Mlig455_018243 {REF} {Length: 916} {TRANSSPLICED} {Pfam: RING-type zinc-finger [PF13445.8, score=34.3]; Ring finger domain [PF13639.8, score=26.9]; Zinc finger, C3HC4 type (RING finger) [PF00097.27, score=26.2]; zinc-RING finger domain [PF14634.8, score=24.3]; Zinc finger, C3HC4 type (RING finger) [PF13920.8, score=23.5]; Zinc finger, C3HC4 type (RING finger) [PF13923.8, score=21.4]; zinc finger of C3HC4-type, RING [PF15227.8, score=21.4]; RING-like zinc finger [PF17123.7, score=18.3]} {Human: ENSG00000063978, RNF4, ring finger protein 4, [RH, Score=50.4, Expect=2e-07]} {Mouse: ENSMUSG00000029110, Rnf4, ring finger protein 4, [RH, Score=49.7, Expect=3e-07]} {RNA1509_19140} {RNA1310_35879, RNA1509_19140} {RNA1509_19140, RNA815_15878}
17. MligTC455_20916 1097 22.84 Mlig455_058503

Neo: Irradiation

Age: logFC(26M/2M)=0.732

Region-enriched R5: 1.791/0.00001

0.962 - - - - - 0.962 Mlig455_058503 {REF} {Length: 1692} {TRANSSPLICED} {RNA1509_13876, RNA1509_17592} {RNA1310_3867.1, RNA1509_17592} {RNA1509_17592, RNA815_27028}
18. MligTC455_53775 449 9.35 Mlig455_012089

Neo: Int S/G2/M

Age: -

0.961 - - - 0.961 - - Mlig455_012089 {REF} {Length: 2012} {NoTransDecoderORF} {RNA1509_35827} {RNA1310_45584} {RNA815_12875}
19. MligTC455_20917 1103 22.98 Mlig455_000241, Mlig455_058509

Neo: Int S/G2/M

Age: -

Region-enriched R5: 1.798/0.00000

CAMK2B 0.96 - - - - - 0.960

Mlig455_000241 {REF} {Length: 4500} {Pfam: Protein kinase domain [PF00069.27, score=174.6]; Calcium/calmodulin dependent protein kinase II association domain [PF08332.12, score=168.3]; Cupin-like domain [PF13621.8, score=108.9]; Protein tyrosine and serine/threonine kinase [PF07714.19, score=73.3]; Domain of unknown function (DUF4440) [PF14534.8, score=28.1]; SnoaL-like domain [PF13474.8, score=25.4]; JmjC domain, hydroxylase [PF02373.24, score=20.1]; Fungal protein kinase [PF17667.3, score=18.0]} {Human: ENSG00000058404, CAMK2B, calcium/calmodulin dependent protein kinase II beta, [Score=607, Expect=0.0]; ENSG00000145349, CAMK2D, calcium/calmodulin dependent protein kinase II delta, [Score=607, Expect=0.0]; ENSG00000148660, CAMK2G, calcium/calmodulin dependent protein kinase II gamma, [Score=594, Expect=0.0]; ENSG00000070808, CAMK2A, calcium/calmodulin dependent protein kinase II alpha, [Score=593, Expect=0.0]} {Mouse: ENSMUSG00000053819, Camk2d, calcium/calmodulin-dependent protein kinase II, delta, [Score=608, Expect=0.0]; ENSMUSG00000057897, Camk2b, calcium/calmodulin-dependent protein kinase II, beta, [Score=606, Expect=0.0]; ENSMUSG00000021820, Camk2g, calcium/calmodulin-dependent protein kinase II gamma, [Score=594, Expect=0.0]; ENSMUSG00000024617, Camk2a, calcium/calmodulin-dependent protein kinase II alpha, [Score=593, Expect=0.0]} {Dmel: FBgn0264607, CaMKII, Calcium/calmodulin-dependent protein kinase II, [Score=606, Expect=0.0]} {Celegans: WBGene00006779, unc-43, Calcium/calmodulin-dependent protein kinase type II, [Score=545, Expect=0.0]} {Smed: dd_Smed_v6_7480_0_2, dd_Smed_v6_7480_0_2, [Score=584, Expect=0.0]} {RNA1509_10552} {RNA1310_5878.1} {RNA815_1565.1}

Mlig455_058509 {REF} {Length: 1430} {TRANSSPLICED} {RNA1509_13876} {RNA1310_3867.1} {RNA815_27028}
20. MligTC455_03563 760 15.83 Mlig455_025786

Neo: Int S/G2/M

Age: -

POLR2B 0.958 - - 0.958 - - - Mlig455_025786 {REF} {Length: 1377} {Pfam: RNA polymerase Rpb2, domain 6 [PF00562.30, score=427.0]; RNA polymerase beta subunit [PF04563.17, score=208.1]; RNA polymerase Rpb2, domain 2 [PF04561.16, score=176.6]; RNA polymerase Rpb2, domain 7 [PF04560.22, score=117.0]; RNA polymerase Rpb2, domain 3 [PF04565.18, score=90.9]; RNA polymerase Rpb2, domain 4 [PF04566.15, score=82.5]; RNA polymerase Rpb2, domain 5 [PF04567.19, score=62.5]} {Human: ENSG00000047315, POLR2B, RNA polymerase II subunit B, [RH, Score=2034, Expect=0.0]} {Mouse: ENSMUSG00000029250, Polr2b, polymerase (RNA) II (DNA directed) polypeptide B, [RH, Score=2033, Expect=0.0]} {Dmel: FBgn0262955, RpII140, RNA polymerase II 140kD subunit, [RH, Score=1983, Expect=0.0]} {Celegans: WBGene00016140, rpb-2, DNA-directed RNA polymerase II subunit RPB2, [RH, Score=1895, Expect=0.0]} {Smed: dd_Smed_v6_2182_0_1, dd_Smed_v6_2182_0_1, [RH, Score=1716, Expect=0.0]} {RNA1509_1580} {RNA1310_264.1} {RNA815_603}
21. MligTC455_05622 661 13.77 Mlig455_022610, Mlig455_063633

Neo: -

Age: -

Region-enriched R5: 1.393/0.01070

MTRR 0.958 - - - - 0.958 -

Mlig455_022610 {REF} {Length: 3064} {TRANSSPLICED} {Pfam: FAD binding domain [PF00667.22, score=111.3]; Flavodoxin [PF00258.27, score=78.5]; Oxidoreductase NAD-binding domain [PF00175.23, score=36.5]; Flavodoxin domain [PF12724.9, score=23.7]} {Human: ENSG00000124275, MTRR, 5-methyltetrahydrofolate-homocysteine methyltransferase reductase, [RH, Score=279, Expect=3e-83]} {Mouse: ENSMUSG00000034617, Mtrr, 5-methyltetrahydrofolate-homocysteine methyltransferase reductase, [RH, Score=285, Expect=6e-86]} {Dmel: FBgn0015623, Cpr, Cytochrome P450 reductase, [Score=143, Expect=2e-35]} {Celegans: WBGene00006510, mtrr-1, Putative methionine synthase reductase, [RH, Score=249, Expect=8e-73]} {Smed: dd_Smed_v6_3947_0_1, dd_Smed_v6_3947_0_1, [RH, Score=315, Expect=6e-98]} {RNA1509_30683} {RNA1310_10032.1} {RNA815_3421.1}

Mlig455_063633 {REF} {Length: 3360} {TRANSSPLICED} {Pfam: FAD binding domain [PF00667.22, score=111.3]; Flavodoxin [PF00258.27, score=78.5]; Oxidoreductase NAD-binding domain [PF00175.23, score=36.2]; Flavodoxin domain [PF12724.9, score=23.8]} {Human: ENSG00000124275, MTRR, 5-methyltetrahydrofolate-homocysteine methyltransferase reductase, [RH, Score=280, Expect=1e-83]} {Mouse: ENSMUSG00000034617, Mtrr, 5-methyltetrahydrofolate-homocysteine methyltransferase reductase, [RH, Score=284, Expect=2e-85]} {Dmel: FBgn0015623, Cpr, Cytochrome P450 reductase, [Score=142, Expect=2e-35]} {Celegans: WBGene00006510, mtrr-1, Putative methionine synthase reductase, [RH, Score=253, Expect=4e-74]} {Smed: dd_Smed_v6_3947_0_1, dd_Smed_v6_3947_0_1, [RH, Score=317, Expect=2e-98]} {RNA1509_30683, RNA1509_52263} {RNA1310_10032.1, RNA1509_30683, RNA1509_52263} {RNA1509_30683, RNA1509_52263, RNA815_3421.1}
22. MligTC455_26720 581 12.11 Mlig455_009059, Mlig455_058126

Neo: -

Age: -

Region-enriched R5: 2.110/0.00447

RFX7 0.953 - - 0.953 - - -

Mlig455_009059 {REF} {Length: 3272} {TRANSSPLICED} {Pfam: RNase H-like domain found in reverse transcriptase [PF17919.3, score=97.4]; RNase H-like domain found in reverse transcriptase [PF17917.3, score=92.6]; RFX DNA-binding domain [PF02257.17, score=92.2]; Integrase zinc binding domain [PF17921.3, score=64.6]; Reverse transcriptase (RNA-dependent DNA polymerase) [PF00078.29, score=64.4]; Integrase core domain [PF00665.28, score=34.5]; RFX5 N-terminal domain [PF18326.3, score=21.9]} {Human: ENSG00000181827, RFX7, regulatory factor X7, [RH, Score=136, Expect=1e-31]} {Mouse: ENSMUSG00000037674, Rfx7, regulatory factor X, 7, [RH, Score=162, Expect=1e-39]} {Dmel: FBgn0037445, CG9727, [Score=143, Expect=5e-34]} {Celegans: WBGene00000914, daf-19, RFX-like transcription factor daf-19, [Score=62.0, Expect=3e-09]} {Smed: dd_Smed_v6_6563_0_1, dd_Smed_v6_6563_0_1, [Score=243, Expect=8e-66]} {RNA1509_29202, RNA1509_50190} {RNA1310_11045, RNA1509_29202, RNA1509_50190} {RNA1509_29202, RNA1509_50190, RNA815_20856}

Mlig455_058126 {REF} {Length: 5865} {Pfam: RNase H-like domain found in reverse transcriptase [PF17919.3, score=97.4]; RNase H-like domain found in reverse transcriptase [PF17917.3, score=92.6]; RFX DNA-binding domain [PF02257.17, score=92.2]; Integrase zinc binding domain [PF17921.3, score=64.6]; Reverse transcriptase (RNA-dependent DNA polymerase) [PF00078.29, score=64.4]; Integrase core domain [PF00665.28, score=34.5]; RFX5 N-terminal domain [PF18326.3, score=21.9]} {Human: ENSG00000181827, RFX7, regulatory factor X7, [RH, Score=136, Expect=1e-31]} {Mouse: ENSMUSG00000037674, Rfx7, regulatory factor X, 7, [RH, Score=162, Expect=1e-39]} {Dmel: FBgn0037445, CG9727, [Score=143, Expect=5e-34]} {Celegans: WBGene00000914, daf-19, RFX-like transcription factor daf-19, [Score=62.0, Expect=3e-09]} {Smed: dd_Smed_v6_6563_0_1, dd_Smed_v6_6563_0_1, [Score=243, Expect=8e-66]} {RNA1509_29202} {RNA1310_11045} {RNA815_20856}
23. MligTC455_54123 611 12.72 Mlig455_052009

Neo: -

Age: logFC(26M/2M)=-0.288

Region-enriched R6: 2.051/0.00658

0.952 - - - - 0.952 - Mlig455_052009 {REF} {Length: 1837} {Pfam: Tropomyosin [PF00261.22, score=75.9]; Tropomyosin like [PF12718.9, score=26.9]; Crescentin protein [PF19220.2, score=20.2]} {Celegans: WBGene00002978, lev-11, Tropomyosin isoforms a/b/d/f, [Score=50.8, Expect=2e-07]} {Smed: dd_Smed_v6_1790_0_1, dd_Smed_v6_1790_0_1, [Score=54.3, Expect=8e-09]} {RNA1509_20736, RNA1509_29863} {RNA1310_27668, RNA1509_29863} {RNA1509_29863, RNA815_13494}
24. MligTC455_33485 1296 27.01 Mlig455_048627, Mlig455_048705, Mlig455_069750

Neo: Neoblast

Age: Down-Up-Up, logFC(26M/2M)=0.383

0.951 - - 0.951 - - -

Mlig455_048627 {REF} {Length: 1569} {TRANSSPLICED} {RNA1509_18958, RNA1509_37074} {RNA1310_22957, RNA1509_18958, RNA1509_37074} {RNA1509_18958, RNA1509_37074, RNA815_949}

Mlig455_048705 {REF} {Length: 1875} {RNA1509_37074} {RNA1310_22957} {RNA815_949}

Mlig455_069750 {REF} {Length: 1555} {TRANSSPLICED} {RNA1509_27010, RNA1509_37074} {RNA1310_22957, RNA1509_27010} {RNA1509_27010, RNA815_949}
25. MligTC455_15340 613 12.78 Mlig455_041048, Mlig455_041153, Mlig455_070076

Neo: Int S/G2/M

Age: -

Region-enriched R5: 1.686/0.04561

WEE2 0.95 - - 0.950 - - -

Mlig455_041048 {REF} {Length: 3300} {TRANSSPLICED} {Pfam: Protein kinase domain [PF00069.27, score=105.1]; Protein tyrosine and serine/threonine kinase [PF07714.19, score=72.1]} {Human: ENSG00000214102, WEE2, WEE1 homolog 2, [RH, Score=120, Expect=3e-28]; ENSG00000263042, WEE2, WEE1 homolog 2, [RH, Score=120, Expect=3e-28]; ENSG00000166483, WEE1, WEE1 G2 checkpoint kinase, [RH, Score=114, Expect=8e-26]} {Mouse: ENSMUSG00000037159, Wee2, WEE1 homolog 2 (S. pombe), [RH, Score=122, Expect=8e-29]; ENSMUSG00000031016, Wee1, WEE 1 homolog 1 (S. pombe), [RH, Score=119, Expect=1e-27]} {Dmel: FBgn0011737, Wee1, Wee1 kinase, [Score=106, Expect=1e-23]} {Celegans: WBGene00006786, unc-51, Serine/threonine-protein kinase unc-51, [Score=58.5, Expect=1e-08]} {Smed: dd_Smed_v6_17244_0_1, dd_Smed_v6_17244_0_1, [Score=68.2, Expect=7e-12]} {RNA1509_36826, RNA1509_45600} {RNA1310_8775, RNA1509_36826, RNA1509_45600} {RNA1509_36826, RNA1509_45600, RNA815_13868}

Mlig455_041153 {REF} {Length: 3290} {TRANSSPLICED} {Pfam: Protein kinase domain [PF00069.27, score=103.9]; Protein tyrosine and serine/threonine kinase [PF07714.19, score=73.5]} {Human: ENSG00000214102, WEE2, WEE1 homolog 2, [RH, Score=122, Expect=1e-28]; ENSG00000263042, WEE2, WEE1 homolog 2, [RH, Score=122, Expect=1e-28]} {Mouse: ENSMUSG00000037159, Wee2, WEE1 homolog 2 (S. pombe), [RH, Score=122, Expect=9e-29]} {Dmel: FBgn0011737, Wee1, Wee1 kinase, [RH, Score=109, Expect=1e-24]} {Celegans: WBGene00006786, unc-51, Serine/threonine-protein kinase unc-51, [Score=62.0, Expect=1e-09]} {Smed: dd_Smed_v6_17244_0_1, dd_Smed_v6_17244_0_1, [Score=70.9, Expect=8e-13]} {RNA1509_36826} {RNA1310_8775} {RNA815_13868}

Mlig455_070076 {REF} {Length: 3140} {TRANSSPLICED} {Pfam: Protein kinase domain [PF00069.27, score=103.9]; Protein tyrosine and serine/threonine kinase [PF07714.19, score=72.2]} {Human: ENSG00000214102, WEE2, WEE1 homolog 2, [RH, Score=120, Expect=4e-28]; ENSG00000263042, WEE2, WEE1 homolog 2, [RH, Score=120, Expect=4e-28]} {Mouse: ENSMUSG00000037159, Wee2, WEE1 homolog 2 (S. pombe), [RH, Score=121, Expect=2e-28]} {Dmel: FBgn0011737, Wee1, Wee1 kinase, [Score=106, Expect=9e-24]} {Celegans: WBGene00006786, unc-51, Serine/threonine-protein kinase unc-51, [Score=59.7, Expect=5e-09]} {Smed: dd_Smed_v6_17244_0_1, dd_Smed_v6_17244_0_1, [Score=68.6, Expect=5e-12]} {RNA1509_36826} {RNA1310_8775} {RNA815_13868}

Refine r cutoff to:    Show

Berezikov Lab - 2020-2021 © ERIBA