TomoSeq data search

Data search

Results for MligTC455_49336

Cluster	Total UMI counts	Global CPM	Transcripts	Categories	Human homolog	Annotation
MligTC455_49336	279	5.81	Mlig455_057549	Neo: - Age: - Region-enriched R5: 1.778/0.03040		Mlig455_057549 {REF} {Length: 2119} {TRANSSPLICED} {Pfam: Universal stress protein family [PF00582.28, score=89.8]} {Smed: dd_Smed_v6_1092_0_1, dd_Smed_v6_1092_0_1, [Score=114, Expect=3e-33]} {RNA1509_32546, RNA1509_38417} {RNA1310_25109, RNA1509_32546, RNA1509_38417} {RNA1509_32546, RNA1509_38417, RNA815_6959}

Cluster

Total UMI counts

Global CPM

Transcripts

Cumulative graph for MligTC455_49336

Region-enriched expression

Region	logFC	logCPM	Pvalue	FDR
RegionR1	-6.441	2.987	0.08038	0.61994
RegionR2	0.156	2.987	0.79026	1.00000
RegionR3	-0.134	2.987	0.89362	1.00000
RegionR4	1.314	2.987	0.13204	0.36853
RegionR5	1.778	2.987	0.00421	0.03040
RegionR6	1.617	2.987	0.01717	0.23177
RegionR7	0.646	2.987	0.53377	1.00000
RegionR8	1.064	2.987	0.37313	1.00000

Regeneration-enriched expression

Region	logFC	logCPM	PValue	FDR
RegenerationR1	5.705	2.987	0.23660	0.96575
RegenerationR2	0.167	2.987	0.67233	0.94610
RegenerationR3	0.572	2.987	0.28753	0.71952
RegenerationR4	-0.19	2.987	0.71980	0.96135
RegenerationR5	-0.441	2.987	0.27957	0.70910
RegenerationR6	-1.567	2.987	0.00186	0.04890
RegenerationBL	-1.701	2.987	0.02765	0.18414
RegenerationTP	-0.002	2.987	0.99346	1.00000

Genes with expression patterns similar to MligTC455_49336

Nr.	Cluster	Total UMI counts	Global CPM	Transcripts	Categories	Human homolog	Σ Spearman correlations	Int1	Int2	Int3	Reg1	Reg2	Reg3	Annotation
1.	MligTC455_49336	279	5.81	Mlig455_057549	Neo: - Age: - Region-enriched R5: 1.778/0.03040		6	1.000	1.000	1.000	1.000	1.000	1.000	Mlig455_057549 {REF} {Length: 2119} {TRANSSPLICED} {Pfam: Universal stress protein family [PF00582.28, score=89.8]} {Smed: dd_Smed_v6_1092_0_1, dd_Smed_v6_1092_0_1, [Score=114, Expect=3e-33]} {RNA1509_32546, RNA1509_38417} {RNA1310_25109, RNA1509_32546, RNA1509_38417} {RNA1509_32546, RNA1509_38417, RNA815_6959}
2.	MligTC455_50696	848	17.66	Mlig455_055962	Neo: - Age: - Region-enriched R5: 1.248/0.00024	HNRNPF	1.66	-	0.952	-	-	-	0.708	Mlig455_055962 {REF} {Length: 2357} {TRANSSPLICED} {Pfam: RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) [PF00076.24, score=59.3]; MYND finger [PF01753.20, score=34.1]} {Human: ENSG00000169813, HNRNPF, heterogeneous nuclear ribonucleoprotein F, [Score=107, Expect=1e-24]; ENSG00000132463, GRSF1, G-rich RNA sequence binding factor 1, [Score=106, Expect=5e-24]} {Mouse: ENSMUSG00000044221, Grsf1, G-rich RNA sequence binding factor 1, [Score=107, Expect=8e-25]; ENSMUSG00000042079, Hnrnpf, heterogeneous nuclear ribonucleoprotein F, [Score=106, Expect=2e-24]} {Dmel: FBgn0259139, glo, glorund, [Score=84.3, Expect=7e-17]} {Celegans: WBGene00022253, hrpf-2, HnRNP F homolog, [Score=69.7, Expect=3e-12]} {Smed: dd_Smed_v6_1957_0_1, dd_Smed_v6_1957_0_1, [Score=89.4, Expect=3e-19]} {RNA1509_19824} {RNA1310_25244} {RNA815_4729}

Nr.

Cluster

Total UMI counts

Global CPM

Transcripts

Categories

Human homolog

Σ Spearman correlations

Int1

Int2

Int3

Reg1

Reg2

Reg3

Annotation

MligTC455_49336

279

5.81

Mlig455_057549

Neo: -

Age: -

Region-enriched R5: 1.778/0.03040

1.000

MligTC455_50696

848

17.66

Mlig455_055962

Neo: -

Age: -

Region-enriched R5: 1.248/0.00024

HNRNPF

1.66

0.952

0.708

Mlig455_055962 {REF} {Length: 2357} {TRANSSPLICED} {Pfam: RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) [PF00076.24, score=59.3]; MYND finger [PF01753.20, score=34.1]} {Human: ENSG00000169813, HNRNPF, heterogeneous nuclear ribonucleoprotein F, [Score=107, Expect=1e-24]; ENSG00000132463, GRSF1, G-rich RNA sequence binding factor 1, [Score=106, Expect=5e-24]} {Mouse: ENSMUSG00000044221, Grsf1, G-rich RNA sequence binding factor 1, [Score=107, Expect=8e-25]; ENSMUSG00000042079, Hnrnpf, heterogeneous nuclear ribonucleoprotein F, [Score=106, Expect=2e-24]} {Dmel: FBgn0259139, glo, glorund, [Score=84.3, Expect=7e-17]} {Celegans: WBGene00022253, hrpf-2, HnRNP F homolog, [Score=69.7, Expect=3e-12]} {Smed: dd_Smed_v6_1957_0_1, dd_Smed_v6_1957_0_1, [Score=89.4, Expect=3e-19]} {RNA1509_19824} {RNA1310_25244} {RNA815_4729}