Data search
Results for MligTC455_50696
| Cluster | Total UMI counts | Global CPM | Transcripts | Categories | Human homolog | Annotation |
|---|---|---|---|---|---|---|
| MligTC455_50696 | 848 | 17.66 | Mlig455_055962 | Neo: - Age: - Region-enriched R5: 1.248/0.00024 |
HNRNPF | Mlig455_055962 {REF} {Length: 2357} {TRANSSPLICED} {Pfam: RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) [PF00076.24, score=59.3]; MYND finger [PF01753.20, score=34.1]} {Human: ENSG00000169813, HNRNPF, heterogeneous nuclear ribonucleoprotein F, [Score=107, Expect=1e-24]; ENSG00000132463, GRSF1, G-rich RNA sequence binding factor 1, [Score=106, Expect=5e-24]} {Mouse: ENSMUSG00000044221, Grsf1, G-rich RNA sequence binding factor 1, [Score=107, Expect=8e-25]; ENSMUSG00000042079, Hnrnpf, heterogeneous nuclear ribonucleoprotein F, [Score=106, Expect=2e-24]} {Dmel: FBgn0259139, glo, glorund, [Score=84.3, Expect=7e-17]} {Celegans: WBGene00022253, hrpf-2, HnRNP F homolog, [Score=69.7, Expect=3e-12]} {Smed: dd_Smed_v6_1957_0_1, dd_Smed_v6_1957_0_1, [Score=89.4, Expect=3e-19]} {RNA1509_19824} {RNA1310_25244} {RNA815_4729} |
Cumulative graph for MligTC455_50696
Region-enriched expression
| Region | logFC | logCPM | Pvalue | FDR | Specificity |
|---|---|---|---|---|---|
| RegionR1 | -1.115 | 4.45 | 0.26624 | 0.91538 | |
| RegionR2 | -0.261 | 4.45 | 0.52697 | 0.89917 | |
| RegionR3 | -0.619 | 4.45 | 0.08823 | 0.52468 | |
| RegionR4 | 0.039 | 4.45 | 0.92071 | 1.00000 | |
| RegionR5 | 1.248 | 4.45 | 0.00001 | 0.00024 | |
| RegionR6 | 0.342 | 4.45 | 0.30855 | 0.89926 | |
| RegionR7 | -0.271 | 4.45 | 0.55707 | 1.00000 | |
| RegionR8 | 0.636 | 4.45 | 0.18884 | 0.77896 |
Regeneration-enriched expression
| Region | logFC | logCPM | PValue | FDR | Specificity |
|---|---|---|---|---|---|
| RegenerationR1 | -6.926 | 4.45 | 0.10189 | 0.81947 | |
| RegenerationR2 | 0.193 | 4.45 | 0.57057 | 0.90252 | |
| RegenerationR3 | 0.746 | 4.45 | 0.05448 | 0.40094 | |
| RegenerationR4 | 0.257 | 4.45 | 0.50082 | 0.86996 | |
| RegenerationR5 | -0.581 | 4.45 | 0.07527 | 0.42918 | |
| RegenerationR6 | 0.168 | 4.45 | 0.64732 | 0.89707 | |
| RegenerationBL | -0.765 | 4.45 | 0.09909 | 0.36997 | |
| RegenerationTP | -0.003 | 4.45 | 0.99442 | 1.00000 |
Genes with expression patterns similar to MligTC455_50696
| Nr. | Cluster | Total UMI counts | Global CPM | Transcripts | Categories | Human homolog | Σ Spearman correlations | Int1 | Int2 | Int3 | Reg1 | Reg2 | Reg3 | Annotation |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1. | MligTC455_50696 | 848 | 17.66 | Mlig455_055962 | Neo: - Age: - Region-enriched R5: 1.248/0.00024 |
HNRNPF | 6 | 1.000 | 1.000 | 1.000 | 1.000 | 1.000 | 1.000 | Mlig455_055962 {REF} {Length: 2357} {TRANSSPLICED} {Pfam: RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) [PF00076.24, score=59.3]; MYND finger [PF01753.20, score=34.1]} {Human: ENSG00000169813, HNRNPF, heterogeneous nuclear ribonucleoprotein F, [Score=107, Expect=1e-24]; ENSG00000132463, GRSF1, G-rich RNA sequence binding factor 1, [Score=106, Expect=5e-24]} {Mouse: ENSMUSG00000044221, Grsf1, G-rich RNA sequence binding factor 1, [Score=107, Expect=8e-25]; ENSMUSG00000042079, Hnrnpf, heterogeneous nuclear ribonucleoprotein F, [Score=106, Expect=2e-24]} {Dmel: FBgn0259139, glo, glorund, [Score=84.3, Expect=7e-17]} {Celegans: WBGene00022253, hrpf-2, HnRNP F homolog, [Score=69.7, Expect=3e-12]} {Smed: dd_Smed_v6_1957_0_1, dd_Smed_v6_1957_0_1, [Score=89.4, Expect=3e-19]} {RNA1509_19824} {RNA1310_25244} {RNA815_4729} |
| 2. | MligTC455_34628 | 701 | 14.61 | Mlig455_023838 | Neo: - Age: - Region-enriched R5: 1.430/0.00656 |
TRAIP | 1.843 | - | - | 0.881 | 0.962 | - | - | Mlig455_023838 {REF} {Length: 1559} {Pfam: Ring finger domain [PF13639.8, score=49.7]; RING-H2 zinc finger domain [PF12678.9, score=35.9]; Zinc finger, C3HC4 type (RING finger) [PF13923.8, score=34.0]; Zinc finger, C3HC4 type (RING finger) [PF13920.8, score=32.1]; zinc-RING finger domain [PF14634.8, score=30.3]; Zinc finger, C3HC4 type (RING finger) [PF00097.27, score=28.2]; RING-like zinc finger [PF17123.7, score=27.6]; Prokaryotic RING finger family 4 [PF14447.8, score=25.2]; RING-type zinc-finger [PF13445.8, score=23.5]; Zinc-ribbon, C4HC2 type [PF17120.7, score=22.6]; Anaphase-promoting complex subunit 11 RING-H2 finger [PF12861.9, score=21.9]} {Human: ENSG00000183763, TRAIP, TRAF interacting protein, [RH, Score=63.5, Expect=8e-12]} {Mouse: ENSMUSG00000032586, Traip, TRAF-interacting protein, [RH, Score=60.1, Expect=1e-09]} {Dmel: FBgn0034314, nopo, no poles, [RH, Score=62.4, Expect=1e-10]} {Celegans: WBGene00004768, sel-11, E3 ubiquitin-protein ligase hrd-1, [Score=56.6, Expect=8e-09]} {Smed: dd_Smed_v6_15562_0_1, dd_Smed_v6_15562_0_1, [Score=56.2, Expect=7e-09]} {RNA1509_35680, RNA1509_42720} {RNA1310_19972.2, RNA1509_42720} {RNA1509_42720, RNA815_11021.1} |
| 3. | MligTC455_49336 | 279 | 5.81 | Mlig455_057549 | Neo: - Age: - Region-enriched R5: 1.778/0.03040 |
1.66 | - | 0.952 | - | - | - | 0.708 | Mlig455_057549 {REF} {Length: 2119} {TRANSSPLICED} {Pfam: Universal stress protein family [PF00582.28, score=89.8]} {Smed: dd_Smed_v6_1092_0_1, dd_Smed_v6_1092_0_1, [Score=114, Expect=3e-33]} {RNA1509_32546, RNA1509_38417} {RNA1310_25109, RNA1509_32546, RNA1509_38417} {RNA1509_32546, RNA1509_38417, RNA815_6959} | |
| 4. | MligTC455_32719 | 387 | 8.06 | Mlig455_053191 | Neo: Int S/G2/M Age: - |
ZNF648 | 0.951 | - | - | - | - | - | 0.951 | Mlig455_053191 {REF} {Length: 2943} {TRANSSPLICED} {Pfam: C2H2-type zinc finger [PF13894.8, score=82.1]; Zinc finger, C2H2 type [PF00096.28, score=69.5]; Zinc-finger double domain [PF13465.8, score=56.4]; Zinc-finger double-stranded RNA-binding [PF12171.10, score=38.3]; Zinc-finger of C2H2 type [PF12874.9, score=35.8]; Drought induced 19 protein (Di19), zinc-binding [PF05605.14, score=27.7]; C2H2-type zinc finger [PF13912.8, score=27.4]; Zinc finger C2H2-type, 3 repeats [PF18868.3, score=24.1]; zinc-finger C2H2-type [PF16622.7, score=23.9]} {Human: ENSG00000179930, ZNF648, zinc finger protein 648, [Score=106, Expect=1e-23]; ENSG00000141956, PRDM15, PR/SET domain 15, [Score=105, Expect=4e-23]; ENSG00000116809, ZBTB17, zinc finger and BTB domain containing 17, [Score=104, Expect=7e-23]; ENSG00000169957, ZNF768, zinc finger protein 768, [Score=102, Expect=2e-22]; ENSG00000198816, ZNF358, zinc finger protein 358, [Score=101, Expect=5e-22]} {Mouse: ENSMUSG00000006215, Zbtb17, zinc finger and BTB domain containing 17, [Score=105, Expect=4e-23]; ENSMUSG00000014039, Prdm15, PR domain containing 15, [Score=105, Expect=4e-23]; ENSMUSG00000062743, Zfp677, zinc finger protein 677, [Score=104, Expect=4e-23]; ENSMUSG00000063108, Zfp26, zinc finger protein 26, [Score=102, Expect=3e-22]; ENSMUSG00000047371, Zfp768, zinc finger protein 768, [Score=102, Expect=1e-22]; ENSMUSG00000048897, Zfp710, zinc finger protein 710, [Score=101, Expect=5e-22]; ENSMUSG00000049755, Zfp672, zinc finger protein 672, [Score=100, Expect=6e-22]; ENSMUSG00000047264, Zfp358, zinc finger protein 358, [Score=100, Expect=6e-22]; ENSMUSG00000045519, Zfp560, zinc finger protein 560, [Score=100, Expect=9e-22]; ENSMUSG00000023902, Zscan10, zinc finger and SCAN domain containing 10, [Score=100, Expect=1e-21]; ENSMUSG00000047603, Zfp235, zinc finger protein 235, [Score=99.8, Expect=2e-21]} {Dmel: FBgn0033934, CG17385, [Score=91.7, Expect=3e-20]} {Celegans: WBGene00021931, Y55F3AM.14, [Score=95.9, Expect=2e-20]} {Smed: dd_Smed_v6_14824_0_1, dd_Smed_v6_14824_0_1, [Score=100, Expect=6e-23]} {RNA1509_49652} {RNA1310_5118} {RNA815_1631} |
| 5. | MligTC455_40232 | 1386 | 28.87 | Mlig455_067893 | Neo: - Age: - |
0.951 | - | - | 0.951 | - | - | - | Mlig455_067893 {REF} {Length: 2466} {TRANSSPLICED} {Pfam: Mediator complex subunit 3 fungal [PF11593.10, score=18.5]} {RNA1509_32765} {RNA1310_8467} {RNA815_3182.1} |
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