TomoSeq data search

Data search

Results for MligTC455_49345

Cluster

Total UMI counts

Global CPM

Transcripts

Categories

Human homolog

Annotation

MligTC455_49345

298

6.22

Mlig455_039437, Mlig455_039482

Neo: -

Age: Up-Down-Down

Region-enriched R4: 2.924/0.03227

GFI1

Mlig455_039437 {REF} {Length: 3270} {Pfam: Zinc-finger double domain [PF13465.8, score=104.5]; Zinc finger, C2H2 type [PF00096.28, score=98.0]; C2H2-type zinc finger [PF13894.8, score=58.0]; Zinc-finger double-stranded RNA-binding [PF12171.10, score=43.7]; C2H2-type zinc finger [PF13912.8, score=37.0]; Zinc-finger of C2H2 type [PF12874.9, score=19.6]; LYAR-type C2HC zinc finger [PF08790.13, score=19.3]} {Human: ENSG00000162676, GFI1, growth factor independent 1 transcriptional repressor, [RH, Score=312, Expect=2e-100]; ENSG00000165702, GFI1B, growth factor independent 1B transcriptional repressor, [RH, Score=300, Expect=5e-97]} {Mouse: ENSMUSG00000029275, Gfi1, growth factor independent 1 transcription repressor, [RH, Score=314, Expect=2e-100]; ENSMUSG00000026815, Gfi1b, growth factor independent 1B, [RH, Score=303, Expect=4e-98]} {Dmel: FBgn0051632, sens-2, senseless-2, [RH, Score=313, Expect=3e-97]} {Celegans: WBGene00003909, pag-3, Zinc finger protein PAG-3, [RH, Score=239, Expect=1e-73]} {Smed: dd_Smed_v6_14824_0_1, dd_Smed_v6_14824_0_1, [RH, Score=290, Expect=5e-93]} {RNA1509_50869} {RNA1310_15988} {RNA815_35565}

Mlig455_039482 {REF} {Length: 3266} {Pfam: Zinc-finger double domain [PF13465.8, score=104.5]; Zinc finger, C2H2 type [PF00096.28, score=98.0]; C2H2-type zinc finger [PF13894.8, score=58.0]; Zinc-finger double-stranded RNA-binding [PF12171.10, score=43.7]; C2H2-type zinc finger [PF13912.8, score=37.0]; Zinc-finger of C2H2 type [PF12874.9, score=19.6]; LYAR-type C2HC zinc finger [PF08790.13, score=19.3]} {Human: ENSG00000162676, GFI1, growth factor independent 1 transcriptional repressor, [RH, Score=313, Expect=2e-100]; ENSG00000165702, GFI1B, growth factor independent 1B transcriptional repressor, [RH, Score=300, Expect=4e-97]} {Mouse: ENSMUSG00000029275, Gfi1, growth factor independent 1 transcription repressor, [RH, Score=314, Expect=2e-100]; ENSMUSG00000026815, Gfi1b, growth factor independent 1B, [RH, Score=303, Expect=4e-98]} {Dmel: FBgn0051632, sens-2, senseless-2, [RH, Score=313, Expect=3e-97]} {Celegans: WBGene00003909, pag-3, Zinc finger protein PAG-3, [RH, Score=239, Expect=1e-73]} {Smed: dd_Smed_v6_14824_0_1, dd_Smed_v6_14824_0_1, [RH, Score=290, Expect=5e-93]} {RNA1509_50869} {RNA1310_15988} {RNA815_35565}

Cumulative graph for MligTC455_49345

Region-enriched expression

Region	logFC	logCPM	Pvalue	FDR	Specificity
RegionR1	-5.991	2.968	0.15559	0.77416
RegionR2	0.218	2.968	0.77597	1.00000
RegionR3	0.98	2.968	0.34559	0.88075
RegionR4	2.924	2.968	0.00429	0.03227
RegionR5	-1.406	2.968	0.99596	1.00000
RegionR6	0.036	2.968	0.84425	1.00000
RegionR7	1.736	2.968	0.08654	0.56580
RegionR8	1.504	2.968	0.21527	0.81970

Regeneration-enriched expression

Region	logFC	logCPM	PValue	FDR	Specificity
RegenerationR1	-0.215	2.968	1.00000	1.00000
RegenerationR2	1.366	2.968	0.09602	0.49176
RegenerationR3	0.66	2.968	0.44185	0.82796
RegenerationR4	-1.94	2.968	0.03642	0.30782
RegenerationR5	1.624	2.968	0.08669	0.45376
RegenerationR6	1.157	2.968	0.20918	0.55225
RegenerationBL	1.525	2.968	0.05430	0.26968
RegenerationTP	-0.403	2.968	0.67495	1.00000

Genes with expression patterns similar to MligTC455_49345

Nr.	Cluster	Total UMI counts	Global CPM	Transcripts	Categories	Human homolog	Σ Spearman correlations	Int1	Int2	Int3	Reg1	Reg2	Reg3	Annotation
1.	MligTC455_49345	298	6.22	Mlig455_039437, Mlig455_039482	Neo: - Age: Up-Down-Down Region-enriched R4: 2.924/0.03227	GFI1	6	1.000	1.000	1.000	1.000	1.000	1.000	Mlig455_039437 {REF} {Length: 3270} {Pfam: Zinc-finger double domain [PF13465.8, score=104.5]; Zinc finger, C2H2 type [PF00096.28, score=98.0]; C2H2-type zinc finger [PF13894.8, score=58.0]; Zinc-finger double-stranded RNA-binding [PF12171.10, score=43.7]; C2H2-type zinc finger [PF13912.8, score=37.0]; Zinc-finger of C2H2 type [PF12874.9, score=19.6]; LYAR-type C2HC zinc finger [PF08790.13, score=19.3]} {Human: ENSG00000162676, GFI1, growth factor independent 1 transcriptional repressor, [RH, Score=312, Expect=2e-100]; ENSG00000165702, GFI1B, growth factor independent 1B transcriptional repressor, [RH, Score=300, Expect=5e-97]} {Mouse: ENSMUSG00000029275, Gfi1, growth factor independent 1 transcription repressor, [RH, Score=314, Expect=2e-100]; ENSMUSG00000026815, Gfi1b, growth factor independent 1B, [RH, Score=303, Expect=4e-98]} {Dmel: FBgn0051632, sens-2, senseless-2, [RH, Score=313, Expect=3e-97]} {Celegans: WBGene00003909, pag-3, Zinc finger protein PAG-3, [RH, Score=239, Expect=1e-73]} {Smed: dd_Smed_v6_14824_0_1, dd_Smed_v6_14824_0_1, [RH, Score=290, Expect=5e-93]} {RNA1509_50869} {RNA1310_15988} {RNA815_35565} Mlig455_039482 {REF} {Length: 3266} {Pfam: Zinc-finger double domain [PF13465.8, score=104.5]; Zinc finger, C2H2 type [PF00096.28, score=98.0]; C2H2-type zinc finger [PF13894.8, score=58.0]; Zinc-finger double-stranded RNA-binding [PF12171.10, score=43.7]; C2H2-type zinc finger [PF13912.8, score=37.0]; Zinc-finger of C2H2 type [PF12874.9, score=19.6]; LYAR-type C2HC zinc finger [PF08790.13, score=19.3]} {Human: ENSG00000162676, GFI1, growth factor independent 1 transcriptional repressor, [RH, Score=313, Expect=2e-100]; ENSG00000165702, GFI1B, growth factor independent 1B transcriptional repressor, [RH, Score=300, Expect=4e-97]} {Mouse: ENSMUSG00000029275, Gfi1, growth factor independent 1 transcription repressor, [RH, Score=314, Expect=2e-100]; ENSMUSG00000026815, Gfi1b, growth factor independent 1B, [RH, Score=303, Expect=4e-98]} {Dmel: FBgn0051632, sens-2, senseless-2, [RH, Score=313, Expect=3e-97]} {Celegans: WBGene00003909, pag-3, Zinc finger protein PAG-3, [RH, Score=239, Expect=1e-73]} {Smed: dd_Smed_v6_14824_0_1, dd_Smed_v6_14824_0_1, [RH, Score=290, Expect=5e-93]} {RNA1509_50869} {RNA1310_15988} {RNA815_35565}
2.	MligTC455_39235	523	10.9	Mlig455_058236	Neo: - Age: logFC(26M/2M)=-0.695	MUC4	1.862	-	-	-	0.957	-	0.905	Mlig455_058236 {REF} {Length: 9547} {Pfam: Calcium-binding EGF domain [PF07645.17, score=73.7]; EGF-like domain [PF00008.29, score=73.3]; Complement Clr-like EGF-like [PF12662.9, score=63.6]; von Willebrand factor type D domain [PF00094.27, score=52.5]; Human growth factor-like EGF [PF12661.9, score=44.5]; EGF domain [PF12947.9, score=44.1]; Coagulation Factor Xa inhibitory site [PF14670.8, score=33.7]; Nidogen-like [PF06119.16, score=22.0]; MSP1 EGF domain 1 [PF12946.9, score=21.2]} {Human: ENSG00000277585, MUC4, mucin 4, cell surface associated, [Score=175, Expect=8e-43]; ENSG00000276613, MUC4, mucin 4, cell surface associated, [Score=171, Expect=1e-41]; ENSG00000273984, MUC4, mucin 4, cell surface associated, [Score=171, Expect=1e-41]; ENSG00000273822, MUC4, mucin 4, cell surface associated, [Score=171, Expect=1e-41]; ENSG00000278303, MUC4, mucin 4, cell surface associated, [Score=171, Expect=1e-41]; ENSG00000145113, MUC4, mucin 4, cell surface associated, [Score=171, Expect=2e-41]; ENSG00000278468, MUC4, mucin 4, cell surface associated, [Score=169, Expect=7e-41]} {Mouse: ENSMUSG00000028369, Svep1, sushi, von Willebrand factor type A, EGF and pentraxin domain containing 1, [Score=116, Expect=5e-25]; ENSMUSG00000063681, Crb1, crumbs family member 1, photoreceptor morphogenesis associated, [Score=115, Expect=3e-25]; ENSMUSG00000079620, Muc4, mucin 4, [Score=111, Expect=1e-23]} {Dmel: FBgn0051665, wry, weary, [Score=119, Expect=2e-26]} {Celegans: WBGene00001403, fbl-1, Fibulin-1, [Score=105, Expect=2e-22]} {Smed: dd_Smed_v6_7067_0_1, dd_Smed_v6_7067_0_1, [Score=95.5, Expect=4e-19]} {RNA1509_14436, RNA1509_2591} {RNA1310_1268.1, RNA1509_14436} {RNA1509_14436, RNA815_473}
3.	MligTC455_46217	213	4.43	Mlig455_057532	Neo: - Age: Down-Up-Down	RBPMS2	1.805	-	-	-	0.955	-	0.850	Mlig455_057532 {REF} {Length: 5470} {Pfam: RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) [PF00076.24, score=53.4]} {Human: ENSG00000166831, RBPMS2, RNA binding protein, mRNA processing factor 2, [RH, Score=128, Expect=2e-35]} {Mouse: ENSMUSG00000031586, Rbpms, RNA binding protein gene with multiple splicing, [RH, Score=125, Expect=3e-35]} {Dmel: FBgn0263995, cpo, couch potato, [Score=164, Expect=7e-46]} {Celegans: WBGene00003172, mec-8, Mec-8 protein, [Score=124, Expect=4e-33]} {Smed: dd_Smed_v6_4296_0_4, dd_Smed_v6_4296_0_4, [Score=150, Expect=3e-43]} {RNA1509_30119} {RNA1310_16586.1} {RNA815_23894}
4.	MligTC455_38084	643	13.39	Mlig455_044428, Mlig455_044462	Neo: - Age: -	ZNF347, ZNF850	1.781	-	-	-	0.950	-	0.831	Mlig455_044428 {REF} {Length: 5133} {Pfam: Zinc finger, C2H2 type [PF00096.28, score=53.4]; C2H2-type zinc finger [PF13894.8, score=28.2]; Zinc-finger of C2H2 type [PF12874.9, score=19.4]} {Human: ENSG00000267041, ZNF850, zinc finger protein 850, [Score=54.7, Expect=6e-07]} {RNA1509_7797} {RNA1310_1145} {RNA815_319.1} Mlig455_044462 {REF} {Length: 6499} {Pfam: Zinc finger, C2H2 type [PF00096.28, score=88.8]; C2H2-type zinc finger [PF13894.8, score=73.9]; C2H2-type zinc finger [PF13912.8, score=39.0]; C2HE / C2H2 / C2HC zinc-binding finger [PF16278.7, score=19.0]} {Human: ENSG00000197937, ZNF347, zinc finger protein 347, [Score=80.5, Expect=1e-14]; ENSG00000281709, ZNF197, zinc finger protein 197, [Score=78.2, Expect=9e-14]; ENSG00000186448, ZNF197, zinc finger protein 197, [Score=78.2, Expect=9e-14]} {Mouse: ENSMUSG00000034538, Zfp418, zinc finger protein 418, [Score=72.8, Expect=2e-12]; ENSMUSG00000058883, Zfp708, zinc finger protein 708, [Score=72.0, Expect=3e-12]; ENSMUSG00000037640, Zfp60, zinc finger protein 60, [Score=70.9, Expect=9e-12]} {Dmel: FBgn0261679, CG42726, [Score=57.0, Expect=7e-08]} {Celegans: WBGene00003847, blmp-1, B lymphocyte-induced maturation protein 1 homolog, [Score=52.0, Expect=3e-06]} {RNA1509_47351} {RNA1310_1145} {RNA815_319.1}
5.	MligTC455_25359	89	1.85	Mlig455_026764, Mlig455_051780	Neo: - Age: -		1.717	-	-	-	0.951	0.766	-	Mlig455_026764 {REF} {Length: 465} {RNA1310_85091} Mlig455_051780 {REF} {Length: 1387} {RNA1310_85091} {RNA815_62404}
6.	MligTC455_12088	61	1.26	Mlig455_057931, Mlig455_057966	Neo: - Age: -		1.696	-	-	-	0.967	0.729	-	Mlig455_057931 {REF} {Length: 396} {RNA1310_75258} {RNA815_44558} Mlig455_057966 {REF} {Length: 396} {RNA1310_75258} {RNA815_44558}
7.	MligTC455_17960	44	0.92	Mlig455_021047	Neo: - Age: - Region-enriched R2: 4.515/0.04131 Region-enriched R4: 3.266/0.03072		0.994	-	-	-	0.994	-	-	Mlig455_021047 {REF} {Length: 2114} {Pfam: SH3 domain [PF17902.3, score=25.9]; Plectin repeat [PF00681.22, score=23.8]} {Smed: dd_Smed_v6_16329_0_1, dd_Smed_v6_16329_0_1, [Score=56.6, Expect=2e-08]} {RNA1509_53557} {RNA1310_11354} {RNA815_18566}
8.	MligTC455_49265	4822	100.45	Mlig455_062250	Neo: - Age: - Regeneration-enriched BL: 2.528		0.961	-	-	-	0.961	-	-	Mlig455_062250 {REF} {Length: 11199} {RNA1509_4161} {RNA1310_2565} {RNA815_853}
9.	MligTC455_11059	54	1.13	Mlig455_034683	Neo: - Age: -		0.96	-	-	-	0.960	-	-	Mlig455_034683 {REF} {Length: 1017} {NoTransDecoderORF} {RNA1509_16318} {RNA1310_94190} {RNA815_40826}
10.	MligTC455_41327	6480	135	Mlig455_007904, Mlig455_008008	Neo: - Age: Down-Up-Down Regeneration-upregulated BL: 2.831 Regeneration-enriched BL: 2.831		0.958	-	-	-	0.958	-	-	Mlig455_007904 {REF} {Length: 2479} {Pfam: F5/8 type C domain [PF00754.27, score=52.7]} {Dmel: FBgn0001083, fw, furrowed, [Score=50.4, Expect=4e-06]} {Smed: dd_Smed_v6_83746_0_1, dd_Smed_v6_83746_0_1, [Score=46.2, Expect=4e-06]} {RNA1509_53019} {RNA1310_2657.1} {RNA815_2454} Mlig455_008008 {REF} {Length: 2766} {Pfam: F5/8 type C domain [PF00754.27, score=48.7]} {Dmel: FBgn0001083, fw, furrowed, [Score=50.4, Expect=4e-06]} {Smed: dd_Smed_v6_83746_0_1, dd_Smed_v6_83746_0_1, [Score=45.8, Expect=7e-06]} {RNA1509_53019} {RNA1310_2657.1} {RNA815_2454}
11.	MligTC455_27936	16737	348.69	Mlig455_021476	Neo: - Age: logFC(26M/2M)=-0.462		0.957	-	-	-	0.957	-	-	Mlig455_021476 {REF} {Length: 938} {RNA1509_1213, RNA1509_22026, RNA1509_34071, RNA1509_44319} {RNA1310_53541, RNA1509_1213, RNA1509_22026, RNA1509_34071, RNA1509_44319} {RNA1509_1213, RNA1509_22026, RNA1509_34071, RNA1509_44319, RNA815_18818.1}
12.	MligTC455_32621	134	2.79	Mlig455_066523	Neo: - Age: Down-Up-Down, logFC(26M/2M)=-0.439	ADRA1A	0.957	-	-	0.957	-	-	-	Mlig455_066523 {REF} {Length: 4139} {Pfam: 7 transmembrane receptor (rhodopsin family) [PF00001.23, score=179.9]; Serpentine type 7TM GPCR chemoreceptor Srsx [PF10320.11, score=25.0]; Serpentine type 7TM GPCR chemoreceptor Srx [PF10328.11, score=22.1]; Olfactory receptor [PF13853.8, score=20.2]} {Human: ENSG00000120907, ADRA1A, adrenoceptor alpha 1A, [Score=170, Expect=8e-45]; ENSG00000171873, ADRA1D, adrenoceptor alpha 1D, [Score=166, Expect=1e-42]} {Mouse: ENSMUSG00000045875, Adra1a, adrenergic receptor, alpha 1a, [Score=169, Expect=1e-44]} {Dmel: FBgn0024944, Oamb, Octopamine receptor in mushroom bodies, [RH, Score=146, Expect=6e-36]} {Celegans: WBGene00004778, ser-3, SERotonin/octopamine receptor family, [Score=152, Expect=4e-38]} {Smed: dd_Smed_v6_19063_0_1, dd_Smed_v6_19063_0_1, [Score=200, Expect=6e-56]} {RNA1509_45114} {RNA1310_9880.1} {RNA815_4254}
13.	MligTC455_30778	100	2.08	Mlig455_061019	Neo: - Age: -	LRIG2	0.951	-	-	-	-	-	0.951	Mlig455_061019 {REF} {Length: 6620} {Pfam: Leucine rich repeat [PF13855.8, score=95.5]; BspA type Leucine rich repeat region (6 copies) [PF13306.8, score=37.0]; Leucine Rich repeats (2 copies) [PF12799.9, score=36.2]} {Human: ENSG00000198799, LRIG2, leucine rich repeats and immunoglobulin like domains 2, [Score=57.8, Expect=2e-07]; ENSG00000255690, TRIL, TLR4 interactor with leucine rich repeats, [Score=57.0, Expect=2e-07]} {Mouse: ENSMUSG00000043496, Tril, TLR4 interactor with leucine-rich repeats, [Score=62.0, Expect=5e-09]} {Dmel: FBgn0004364, 18w, 18 wheeler, [Score=77.4, Expect=7e-14]} {Celegans: WBGene00006593, tol-1, TOLl (Drosophila) family, [Score=77.4, Expect=7e-14]} {RNA1509_37294} {RNA1310_1523.2} {RNA815_1519}
14.	MligTC455_15514	145	3.02	Mlig455_050604	Neo: Int S/G2/M Age: Up-Down-Down, logFC(26M/2M)=-0.355 Region-enriched R4: 2.082/0.02358	MFSD4A	0.95	-	0.950	-	-	-	-	Mlig455_050604 {REF} {Length: 3347} {Human: ENSG00000174514, MFSD4A, major facilitator superfamily domain containing 4A, [RH, Score=116, Expect=7e-28]} {Mouse: ENSMUSG00000059149, Mfsd4a, major facilitator superfamily domain containing 4A, [Score=125, Expect=6e-31]} {Smed: dd_Smed_v6_10372_0_1, dd_Smed_v6_10372_0_1, [Score=142, Expect=1e-37]} {RNA1509_25745} {RNA1310_14372.1} {RNA815_696}

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