TomoSeq data search

Data search

Results for MligTC455_49414

Cluster

Total UMI counts

Global CPM

Transcripts

Categories

Human homolog

Annotation

MligTC455_49414

575

11.98

Mlig455_012712

Neo: -

Age: -

AMN1

Mlig455_012712 {REF} {Length: 1408} {Pfam: Leucine Rich repeats (2 copies) [PF12799.9, score=29.0]; Leucine Rich repeat [PF13516.8, score=21.0]} {Human: ENSG00000151743, AMN1, antagonist of mitotic exit network 1 homolog, [RH, Score=141, Expect=8e-41]} {Mouse: ENSMUSG00000068250, Amn1, antagonist of mitotic exit network 1, [RH, Score=127, Expect=3e-35]} {Dmel: FBgn0038385, Fbxl7, F-box and leucine-rich repeat protein 7, [Score=63.2, Expect=5e-11]} {Celegans: WBGene00015350, fbxl-1, Uncharacterized F-box/LRR-repeat protein C02F5.7, [Score=61.6, Expect=9e-11]} {Smed: dd_Smed_v6_10175_0_1, dd_Smed_v6_10175_0_1, [RH, Score=108, Expect=2e-28]} {RNA1509_22504, RNA1509_39590, RNA1509_40159} {RNA1310_24489.2, RNA1509_22504, RNA1509_39590, RNA1509_40159} {RNA1509_22504, RNA1509_39590, RNA1509_40159, RNA815_10701}

Cumulative graph for MligTC455_49414

Region-enriched expression

Region	logFC	logCPM	Pvalue	FDR	Specificity
RegionR1	0.442	3.924	0.70374	1.00000
RegionR2	0.317	3.924	0.50317	0.88243
RegionR3	0.111	3.924	0.78357	1.00000
RegionR4	0.378	3.924	0.41720	0.74465
RegionR5	0.296	3.924	0.43791	0.79820
RegionR6	-0.449	3.924	0.34535	0.93143
RegionR7	0.982	3.924	0.05287	0.44159
RegionR8	-2.079	3.924	0.06527	0.49409

Regeneration-enriched expression

Region	logFC	logCPM	PValue	FDR	Specificity
RegenerationR1	-7.619	3.924	0.05570	0.71415
RegenerationR2	0.258	3.924	0.44734	0.84435
RegenerationR3	-0.098	3.924	0.80892	0.98453
RegenerationR4	-0.267	3.924	0.51868	0.87891
RegenerationR5	-0.071	3.924	0.84744	1.00000
RegenerationR6	0.319	3.924	0.47326	0.78663
RegenerationBL	0.943	3.924	0.10460	0.38180
RegenerationTP	1.318	3.924	0.06056	0.39872

Genes with expression patterns similar to MligTC455_49414

Nr.	Cluster	Total UMI counts	Global CPM	Transcripts	Categories	Human homolog	Σ Spearman correlations	Int1	Int2	Int3	Reg1	Reg2	Reg3	Annotation
1.	MligTC455_49414	575	11.98	Mlig455_012712	Neo: - Age: -	AMN1	6	1.000	1.000	1.000	1.000	1.000	1.000	Mlig455_012712 {REF} {Length: 1408} {Pfam: Leucine Rich repeats (2 copies) [PF12799.9, score=29.0]; Leucine Rich repeat [PF13516.8, score=21.0]} {Human: ENSG00000151743, AMN1, antagonist of mitotic exit network 1 homolog, [RH, Score=141, Expect=8e-41]} {Mouse: ENSMUSG00000068250, Amn1, antagonist of mitotic exit network 1, [RH, Score=127, Expect=3e-35]} {Dmel: FBgn0038385, Fbxl7, F-box and leucine-rich repeat protein 7, [Score=63.2, Expect=5e-11]} {Celegans: WBGene00015350, fbxl-1, Uncharacterized F-box/LRR-repeat protein C02F5.7, [Score=61.6, Expect=9e-11]} {Smed: dd_Smed_v6_10175_0_1, dd_Smed_v6_10175_0_1, [RH, Score=108, Expect=2e-28]} {RNA1509_22504, RNA1509_39590, RNA1509_40159} {RNA1310_24489.2, RNA1509_22504, RNA1509_39590, RNA1509_40159} {RNA1509_22504, RNA1509_39590, RNA1509_40159, RNA815_10701}
2.	MligTC455_53783	2276	47.42	Mlig455_033616, Mlig455_033717, Mlig455_050113	Neo: - Age: Down-Up-Up	GLIPR2	2.558	-	-	0.791	0.815	0.952	-	Mlig455_033616 {REF} {Length: 1910} {Pfam: Cysteine-rich secretory protein family [PF00188.28, score=126.1]} {Human: ENSG00000122694, GLIPR2, GLI pathogenesis related 2, [Score=115, Expect=5e-30]} {Mouse: ENSMUSG00000028480, Glipr2, GLI pathogenesis-related 2, [Score=122, Expect=2e-32]} {Dmel: FBgn0051482, CG31482, [RH, Score=102, Expect=8e-25]} {Celegans: WBGene00010192, F57B7.2, [Score=77.8, Expect=1e-15]} {Smed: dd_Smed_v6_12963_0_1, dd_Smed_v6_12963_0_1, [Score=164, Expect=2e-45]} {RNA1509_9849} {RNA1310_14470.1} {RNA815_13662.1} Mlig455_033717 {REF} {Length: 1817} {Pfam: Cysteine-rich secretory protein family [PF00188.28, score=129.2]} {Human: ENSG00000122694, GLIPR2, GLI pathogenesis related 2, [Score=115, Expect=5e-30]} {Mouse: ENSMUSG00000028480, Glipr2, GLI pathogenesis-related 2, [Score=122, Expect=1e-32]} {Dmel: FBgn0051482, CG31482, [RH, Score=102, Expect=5e-25]} {Celegans: WBGene00010192, F57B7.2, [Score=77.4, Expect=1e-15]} {Smed: dd_Smed_v6_1988_0_1, dd_Smed_v6_1988_0_1, [Score=196, Expect=2e-57]} {RNA1509_9849} {RNA1310_14470.1} {RNA815_13662.1} Mlig455_050113 {REF} {Length: 1934} {Pfam: Cysteine-rich secretory protein family [PF00188.28, score=129.1]} {Human: ENSG00000122694, GLIPR2, GLI pathogenesis related 2, [Score=116, Expect=5e-30]} {Mouse: ENSMUSG00000028480, Glipr2, GLI pathogenesis-related 2, [Score=122, Expect=2e-32]} {Dmel: FBgn0051482, CG31482, [RH, Score=102, Expect=8e-25]} {Celegans: WBGene00010192, F57B7.2, [Score=79.3, Expect=3e-16]} {Smed: dd_Smed_v6_1988_0_1, dd_Smed_v6_1988_0_1, [Score=196, Expect=3e-57]} {RNA1509_9849} {RNA1310_14470.1, RNA1509_9849} {RNA1509_9849, RNA815_13662.1}
3.	MligTC455_32309	828	17.24	Mlig455_050857	Neo: - Age: Up-Down-Down, logFC(26M/2M)=-0.573	ZAN	2.48	-	-	0.799	0.725	0.956	-	Mlig455_050857 {REF} {Length: 9674} {Human: ENSG00000146839, ZAN, zonadhesin (gene/pseudogene), [Score=57.8, Expect=5e-07]} {RNA1509_20499, RNA1509_31314, RNA1509_37922, RNA1509_38195, RNA1509_458, RNA1509_7032} {RNA1310_3777.1, RNA1509_20499, RNA1509_31314, RNA1509_37922, RNA1509_38195, RNA1509_7032} {RNA1509_20499, RNA1509_31314, RNA1509_37922, RNA1509_38195, RNA1509_7032, RNA815_49.1}
4.	MligTC455_23041	1502	31.29	Mlig455_043274, Mlig455_043300	Neo: - Age: -	FOXJ1	1.813	-	-	0.963	-	0.850	-	Mlig455_043274 {REF} {Length: 3849} {TRANSSPLICED} {RNA1509_6271} {RNA1310_4486.1} {RNA815_9655} Mlig455_043300 {REF} {Length: 4018} {TRANSSPLICED} {Pfam: Forkhead domain [PF00250.20, score=92.4]; Anti-sigma-K factor rskA [PF10099.11, score=26.3]} {Human: ENSG00000129654, FOXJ1, forkhead box J1, [Score=107, Expect=5e-24]} {Mouse: ENSMUSG00000034227, Foxj1, forkhead box J1, [Score=107, Expect=2e-24]} {Dmel: FBgn0004896, fd59A, forkhead domain 59A, [Score=76.6, Expect=2e-14]} {Celegans: WBGene00006853, unc-130, [Score=83.2, Expect=4e-17]} {Smed: dd_Smed_v6_14635_0_1, dd_Smed_v6_14635_0_1, [Score=106, Expect=2e-24]} {RNA1509_6271} {RNA1310_4486.1, RNA1509_6271} {RNA1509_6271, RNA815_9655}
5.	MligTC455_25183	587	12.22	Mlig455_005102	Neo: - Age: Down-Up-Down Region-enriched R8: 2.221/0.00519		1.77	-	-	-	0.820	-	0.950	Mlig455_005102 {REF} {Length: 3024} {Pfam: Amiloride-sensitive sodium channel [PF00858.26, score=136.2]} {Celegans: WBGene00009073, delm-1, DEgenerin Linked to Mechanosensation, [Score=49.7, Expect=5e-06]} {Smed: dd_Smed_v6_20466_0_2, dd_Smed_v6_20466_0_2, [Score=84.3, Expect=5e-17]} {RNA1509_9013} {RNA1310_7298} {RNA815_2337}
6.	MligTC455_06092	762	15.88	Mlig455_069915	Neo: - Age: Down-Up-Down, logFC(26M/2M)=-0.940		1.757	-	-	-	0.799	0.958	-	Mlig455_069915 {REF} {Length: 3038} {Pfam: Otopetrin [PF03189.15, score=32.6]} {RNA1509_10108} {RNA1310_8141, RNA1509_10108} {RNA1509_10108, RNA815_2847.1}
7.	MligTC455_46822	605	12.61	Mlig455_034621	Neo: - Age: Down-Up-Down, logFC(26M/2M)=-0.538		1.751	-	-	-	0.787	0.964	-	Mlig455_034621 {REF} {Length: 4106} {TRANSSPLICED} {RNA1509_53831} {RNA1310_22633.1} {RNA815_28333}
8.	MligTC455_15674	2877	59.94	Mlig455_064112	Neo: - Age: Down-Up-Down	LKAAEAR1	1.74	-	-	-	0.784	0.956	-	Mlig455_064112 {REF} {Length: 1020} {Pfam: Family of unknown function with LKAAEAR motif [PF15478.8, score=102.2]} {Human: ENSG00000171695, LKAAEAR1, LKAAEAR motif containing 1, [RH, Score=47.0, Expect=2e-06]} {Smed: dd_Smed_v6_8554_0_1, dd_Smed_v6_8554_0_1, [RH, Score=102, Expect=1e-28]} {RNA1509_12943, RNA1509_8205} {RNA1310_37956, RNA1509_12943, RNA1509_8205} {RNA1509_12943, RNA1509_8205, RNA815_16434.2}
9.	MligTC455_52249	1365	28.44	Mlig455_007872	Neo: - Age: Down-Down-Up Region-enriched R2: 1.111/0.04280		1.715	-	-	-	0.763	0.952	-	Mlig455_007872 {REF} {Length: 2081} {Pfam: Transmembrane protein 237 [PF15383.8, score=91.3]} {Mouse: ENSMUSG00000038079, Tmem237, transmembrane protein 237, [Score=55.1, Expect=1e-07]} {RNA1509_6211} {RNA1310_13658, RNA1509_6211} {RNA1509_6211, RNA815_1318.1}
10.	MligTC455_24519	1035	21.55	Mlig455_026505	Neo: - Age: Up-Down-Down Region-enriched R2: 1.364/0.03756	DNAH10	0.973	-	-	-	-	0.973	-	Mlig455_026505 {REF} {Length: 14733} {Pfam: Hydrolytic ATP binding site of dynein motor region [PF12774.9, score=521.9]; Dynein heavy chain, N-terminal region 2 [PF08393.15, score=390.5]; P-loop containing dynein motor region D4 [PF12780.9, score=341.0]; Dynein heavy chain C-terminal domain [PF18199.3, score=306.8]; ATP-binding dynein motor region [PF12781.9, score=282.5]; P-loop containing dynein motor region [PF12775.9, score=264.2]; Microtubule-binding stalk of dynein motor [PF12777.9, score=214.4]; Dynein heavy chain AAA lid domain [PF18198.3, score=174.9]; Dynein heavy chain region D6 P-loop domain [PF03028.17, score=142.3]; AAA domain (dynein-related subfamily) [PF07728.16, score=92.9]; Dynein heavy chain AAA lid domain [PF17852.3, score=81.8]; AAA+ lid domain [PF17857.3, score=63.2]; AAA domain [PF13401.8, score=44.6]; ATPase family associated with various cellular activities (AAA) [PF00004.31, score=34.7]; AAA ATPase domain [PF13191.8, score=31.6]; AAA domain [PF13238.8, score=24.7]; MoxR domain in the MoxR-vWA-beta-propeller ternary systems [PF20030.1, score=21.4]; Sigma-54 interaction domain [PF00158.28, score=21.3]} {Human: ENSG00000281935, DNAH10, dynein axonemal heavy chain 10, [RH, Score=4662, Expect=0.0]} {Mouse: ENSMUSG00000038011, Dnah10, dynein, axonemal, heavy chain 10, [Score=4676, Expect=0.0]} {Dmel: FBgn0013813, Dhc98D, Dynein heavy chain at 89D, [RH, Score=3860, Expect=0.0]} {Celegans: WBGene00000962, dhc-1, Dynein heavy chain, cytoplasmic, [Score=1408, Expect=0.0]} {Smed: dd_Smed_v6_5169_0_1, dd_Smed_v6_5169_0_1, [RH, Score=4698, Expect=0.0]} {RNA1509_19877, RNA1509_2715, RNA1509_29080, RNA1509_395} {RNA1310_40.1, RNA1509_19877, RNA1509_2715, RNA1509_29080, RNA1509_395} {RNA1509_19877, RNA1509_2715, RNA1509_29080, RNA1509_395, RNA815_20}
11.	MligTC455_37677	438	9.12	Mlig455_032872	Neo: - Age: -		0.963	-	-	-	-	0.963	-	Mlig455_032872 {REF} {Length: 906} {NoTransDecoderORF} {RNA1509_53375} {RNA1310_18706} {RNA815_8584.1}
12.	MligTC455_44236	8742	182.13	Mlig455_003084, Mlig455_062811	Neo: - Age: -	RSPH3	0.963	-	-	-	-	0.963	-	Mlig455_003084 {REF} {Length: 2211} {Pfam: Radial spoke protein 3 [PF06098.13, score=416.8]} {Human: ENSG00000130363, RSPH3, radial spoke head 3 homolog, [RH, Score=379, Expect=7e-129]} {Mouse: ENSMUSG00000023806, Rsph3b, radial spoke 3B homolog (Chlamydomonas), [RH, Score=319, Expect=7e-104]; ENSMUSG00000073471, Rsph3a, radial spoke 3A homolog (Chlamydomonas), [RH, Score=318, Expect=5e-104]} {Dmel: FBgn0052392, CG32392, [RH, Score=187, Expect=1e-54]} {Smed: dd_Smed_v6_2287_0_1, dd_Smed_v6_2287_0_1, [RH, Score=454, Expect=9e-159]} {RNA1509_928} {RNA1310_13874} {RNA815_5098} Mlig455_062811 {REF} {Length: 2209} {Pfam: Radial spoke protein 3 [PF06098.13, score=416.8]} {Human: ENSG00000130363, RSPH3, radial spoke head 3 homolog, [RH, Score=379, Expect=7e-129]} {Mouse: ENSMUSG00000023806, Rsph3b, radial spoke 3B homolog (Chlamydomonas), [RH, Score=319, Expect=7e-104]; ENSMUSG00000073471, Rsph3a, radial spoke 3A homolog (Chlamydomonas), [RH, Score=318, Expect=5e-104]} {Dmel: FBgn0052392, CG32392, [RH, Score=187, Expect=1e-54]} {Smed: dd_Smed_v6_2287_0_1, dd_Smed_v6_2287_0_1, [RH, Score=454, Expect=9e-159]} {RNA1509_928} {RNA1310_13874, RNA1509_928} {RNA1509_928, RNA815_5098}
13.	MligTC455_54231	270	5.62	Mlig455_059344	Neo: - Age: logFC(26M/2M)=-0.427		0.962	-	-	-	-	0.962	-	Mlig455_059344 {REF} {Length: 1419} {RNA1310_28936} {RNA815_10014.1}
14.	MligTC455_44462	171	3.56	Mlig455_019811	Neo: - Age: Down-Up-Down		0.958	-	-	-	-	0.958	-	Mlig455_019811 {REF} {Length: 1980} {RNA1509_25005} {RNA1310_2380} {RNA815_20909.1}
15.	MligTC455_47284	1985	41.36	Mlig455_035332, Mlig455_035375	Neo: - Age: Down-Up-Up Region-enriched R2: 2.254/0.00001	PANK4	0.955	-	-	-	-	0.955	-	Mlig455_035332 {REF} {Length: 1878} {Pfam: Fumble [PF03630.16, score=120.1]} {Human: ENSG00000273494, PANK4, pantothenate kinase 4, [Score=106, Expect=2e-24]; ENSG00000157881, PANK4, pantothenate kinase 4, [Score=106, Expect=2e-24]} {Mouse: ENSMUSG00000029056, Pank4, pantothenate kinase 4, [Score=102, Expect=5e-23]} {Dmel: FBgn0011205, fbl, fumble, [Score=73.6, Expect=3e-14]} {Celegans: WBGene00004068, pnk-1, PaNtothenate Kinase, [Score=68.2, Expect=2e-12]} {Smed: dd_Smed_v6_994_0_1, dd_Smed_v6_994_0_1, [Score=152, Expect=9e-43]} {RNA1509_12908, RNA1509_25097, RNA1509_42106} {RNA1310_12126.1, RNA1509_12908, RNA1509_25097, RNA1509_42106} {RNA1509_12908, RNA1509_25097, RNA1509_42106, RNA815_8093.2} Mlig455_035375 {REF} {Length: 1877} {Pfam: Fumble [PF03630.16, score=118.3]} {Human: ENSG00000157881, PANK4, pantothenate kinase 4, [Score=101, Expect=1e-22]; ENSG00000273494, PANK4, pantothenate kinase 4, [Score=101, Expect=9e-23]} {Mouse: ENSMUSG00000029056, Pank4, pantothenate kinase 4, [Score=97.1, Expect=2e-21]} {Dmel: FBgn0011205, fbl, fumble, [Score=71.6, Expect=1e-13]} {Celegans: WBGene00004068, pnk-1, PaNtothenate Kinase, [Score=66.2, Expect=9e-12]} {Smed: dd_Smed_v6_994_0_1, dd_Smed_v6_994_0_1, [Score=148, Expect=5e-41]} {RNA1509_12908} {RNA1310_12126.1} {RNA815_8093.2}
16.	MligTC455_24852	1411	29.39	Mlig455_012420	Neo: - Age: Down-Down-Up, logFC(26M/2M)=-0.287	FBXO16	0.95	-	-	-	-	0.950	-	Mlig455_012420 {REF} {Length: 3757} {Pfam: F-box-like [PF12937.9, score=34.0]; F-box domain [PF00646.35, score=22.7]} {Human: ENSG00000214050, FBXO16, F-box protein 16, [Score=110, Expect=5e-26]} {Mouse: ENSMUSG00000034532, Fbxo16, F-box protein 16, [Score=107, Expect=5e-25]} {Dmel: FBgn0041171, ago, archipelago, [Score=58.2, Expect=2e-08]} {Smed: dd_Smed_v6_12714_0_1, dd_Smed_v6_12714_0_1, [Score=112, Expect=3e-27]} {RNA1509_8187} {RNA1310_37024} {RNA815_17035}
17.	MligTC455_25808	419	8.73	Mlig455_031559	Neo: - Age: -	ENDOV	0.95	-	-	-	-	-	0.950	Mlig455_031559 {REF} {Length: 2203} {Pfam: Endonuclease V [PF04493.16, score=203.3]} {Human: ENSG00000173818, ENDOV, endonuclease V, [RH, Score=202, Expect=9e-63]} {Mouse: ENSMUSG00000039850, Endov, endonuclease V, [RH, Score=207, Expect=4e-64]} {Celegans: WBGene00007464, C08H9.3, Probable dolichyl pyrophosphate Glc1Man9GlcNAc2 alpha-1,3-glucosyltransferase, [Score=97.8, Expect=4e-22]} {Smed: dd_Smed_v6_9595_0_3, dd_Smed_v6_9595_0_3, [RH, Score=112, Expect=9e-29]} {RNA1509_46904} {RNA1310_32480} {RNA815_14313.1}
18.	MligTC455_52834	181	3.78	Mlig455_033318	Neo: - Age: -	CCDC112	0.95	-	-	-	-	0.950	-	Mlig455_033318 {REF} {Length: 3199} {TRANSSPLICED} {Pfam: Transcriptional regulator, Out at first [PF14941.8, score=49.7]} {Human: ENSG00000164221, CCDC112, coiled-coil domain containing 112, [Score=184, Expect=2e-49]} {Mouse: ENSMUSG00000071855, Ccdc112, coiled-coil domain containing 112, [Score=174, Expect=3e-46]} {Smed: dd_Smed_v6_12448_0_1, dd_Smed_v6_12448_0_1, [RH, Score=201, Expect=2e-56]} {RNA1509_16362, RNA1509_36234, RNA1509_46670} {RNA1310_3182, RNA1509_16362, RNA1509_36234} {RNA1509_16362, RNA1509_36234, RNA815_6554}

Berezikov Lab - 2020-2021 © ERIBA