M. lignano Tomo-Seq
Mlig455 transcriptome Search Regeneration Regions Sections Download

Data search


search
Exact
Search

Results for MligTC455_06092

Cluster Total UMI counts Global CPM Transcripts Categories Human homolog Annotation
MligTC455_06092 762 15.88 Mlig455_069915

Neo: -

Age: Down-Up-Down, logFC(26M/2M)=-0.940

 Mlig455_069915 {REF} {Length: 3038} {Pfam: Otopetrin [PF03189.15, score=32.6]} {RNA1509_10108} {RNA1310_8141, RNA1509_10108} {RNA1509_10108, RNA815_2847.1}

Cumulative graph for MligTC455_06092

Region-enriched expression

Region logFC logCPM Pvalue FDR Specificity
RegionR1 -1.028 4.273 0.36413 1.00000
RegionR2 0.617 4.273 0.12246 0.43346
RegionR3 0.214 4.273 0.52292 1.00000
RegionR4 -0.453 4.273 0.26893 0.57412
RegionR5 -0.797 4.273 0.02738 0.12126
RegionR6 -0.405 4.273 0.27823 0.86804
RegionR7 0.796 4.273 0.05303 0.44254
RegionR8 1.055 4.273 0.04242 0.40358

Regeneration-enriched expression

Region logFC logCPM PValue FDR Specificity
RegenerationR1 -7.105 4.273 0.10425 0.82470
RegenerationR2 -0.361 4.273 0.25214 0.69825
RegenerationR3 -0.366 4.273 0.30724 0.73786
RegenerationR4 -0.135 4.273 0.72032 0.96159
RegenerationR5 -0.35 4.273 0.35267 0.76586
RegenerationR6 -0.419 4.273 0.28836 0.63851
RegenerationBL -0.901 4.273 0.03911 0.22408
RegenerationTP -0.882 4.273 0.05348 0.37820


Genes with expression patterns similar to MligTC455_06092

Nr. Cluster Total UMI counts Global CPM Transcripts Categories Human homolog Σ Spearman correlations Int1 Int2 Int3 Reg1 Reg2 Reg3 Annotation
1. MligTC455_06092 762 15.88 Mlig455_069915

Neo: -

Age: Down-Up-Down, logFC(26M/2M)=-0.940

 6 1.000 1.000 1.000 1.000 1.000 1.000 Mlig455_069915 {REF} {Length: 3038} {Pfam: Otopetrin [PF03189.15, score=32.6]} {RNA1509_10108} {RNA1310_8141, RNA1509_10108} {RNA1509_10108, RNA815_2847.1}
2. MligTC455_44679 1192 24.82 Mlig455_015484

Neo: -

Age: -

 CATIP 3.435 - 0.824 - 0.813 0.958 0.840 Mlig455_015484 {REF} {Length: 1772} {Human: ENSG00000158428, CATIP, ciliogenesis associated TTC17 interacting protein, [RH, Score=235, Expect=2e-73]} {Mouse: ENSMUSG00000073650, Catip, ciliogenesis associated TTC17 interacting protein, [RH, Score=199, Expect=1e-58]} {Smed: dd_Smed_v6_5952_0_4, dd_Smed_v6_5952_0_4, [RH, Score=307, Expect=6e-102]} {RNA1509_4430} {RNA1310_17964} {RNA815_14802}
3. MligTC455_44795 953 19.85 Mlig455_013497

Neo: -

Age: -

 LRRC74A 3.339 - 0.833 - 0.968 0.725 0.813 Mlig455_013497 {REF} {Length: 3050} {Pfam: Leucine Rich repeat [PF13516.8, score=58.5]; EF-hand domain pair [PF13499.8, score=32.4]; EF-hand domain [PF13405.8, score=29.5]; EF hand [PF00036.34, score=27.0]; EF-hand domain pair [PF13833.8, score=23.7]; Leucine Rich repeats (2 copies) [PF12799.9, score=21.6]; EF hand [PF13202.8, score=20.1]} {Human: ENSG00000100565, LRRC74A, leucine rich repeat containing 74A, [Score=125, Expect=4e-30]; ENSG00000187905, LRRC74B, leucine rich repeat containing 74B, [Score=120, Expect=8e-29]} {Mouse: ENSMUSG00000059114, Lrrc74a, leucine rich repeat containing 74A, [Score=132, Expect=1e-32]} {Celegans: WBGene00009201, F28C1.3, Protein phosphatase 1 regulatory subunit 37 homolog, [Score=54.3, Expect=2e-07]} {Smed: dd_Smed_v6_10342_0_1, dd_Smed_v6_10342_0_1, [Score=137, Expect=2e-34]} {RNA1509_9378} {RNA1310_8966} {RNA815_2842}
4. MligTC455_37573 1343 27.98 Mlig455_036889

Neo: -

Age: -

 RIBC2 3.094 - 0.711 - 0.702 0.979 0.702 Mlig455_036889 {REF} {Length: 2270} {Pfam: RIB43A [PF05914.14, score=479.9]} {Human: ENSG00000128408, RIBC2, RIB43A domain with coiled-coils 2, [RH, Score=294, Expect=8e-97]} {Mouse: ENSMUSG00000022431, Ribc2, RIB43A domain with coiled-coils 2, [RH, Score=252, Expect=1e-80]} {Dmel: FBgn0036214, CG7264, [RH, Score=135, Expect=3e-36]} {Smed: dd_Smed_v6_26360_0_1, dd_Smed_v6_26360_0_1, [RH, Score=440, Expect=1e-154]} {RNA1509_28669, RNA1509_29035, RNA1509_32630} {RNA1310_14063, RNA1509_28669, RNA1509_29035, RNA1509_32630} {RNA1509_28669, RNA1509_29035, RNA1509_32630, RNA815_3363.1}
5. MligTC455_39968 3050 63.55 Mlig455_038803, Mlig455_038818

Neo: -

Age: -

 ARMH1 2.768 - - - 0.965 0.937 0.866

Mlig455_038803 {REF} {Length: 1521} {TRANSSPLICED} {Pfam: Family of unknown function (DUF5578) [PF17741.3, score=307.3]; Diaphanous GTPase-binding Domain [PF06371.15, score=24.8]} {Human: ENSG00000198520, ARMH1, armadillo-like helical domain containing 1, [Score=330, Expect=1e-109]} {Mouse: ENSMUSG00000060268, Armh1, armadillo-like helical domain containing 1, [Score=348, Expect=9e-117]} {Smed: dd_Smed_v6_18133_0_1, dd_Smed_v6_18133_0_1, [Score=452, Expect=2e-158]} {RNA1509_47565} {RNA1310_17500.2} {RNA815_7289}

Mlig455_038818 {REF} {Length: 1590} {TRANSSPLICED} {Pfam: Family of unknown function (DUF5578) [PF17741.3, score=371.8]; Diaphanous GTPase-binding Domain [PF06371.15, score=24.7]; HEAT repeats [PF13646.8, score=23.6]} {Human: ENSG00000198520, ARMH1, armadillo-like helical domain containing 1, [RH, Score=388, Expect=4e-132]} {Mouse: ENSMUSG00000060268, Armh1, armadillo-like helical domain containing 1, [RH, Score=405, Expect=9e-139]} {Smed: dd_Smed_v6_18133_0_1, dd_Smed_v6_18133_0_1, [RH, Score=512, Expect=0.0]} {RNA1509_47565, RNA1509_5763} {RNA1310_17500.1, RNA1509_47565, RNA1509_5763} {RNA1509_47565, RNA1509_5763, RNA815_7289}
6. MligTC455_43588 1419 29.57 Mlig455_002159, Mlig455_002304

Neo: -

Age: logFC(26M/2M)=0.283

Region-enriched R4: 2.039/0.00360

 CYP2J2 2.732 - - - 0.955 0.859 0.918

Mlig455_002159 {REF} {Length: 1922} {TRANSSPLICED} {Pfam: Cytochrome P450 [PF00067.24, score=324.8]} {Human: ENSG00000134716, CYP2J2, cytochrome P450 family 2 subfamily J member 2, [Score=194, Expect=3e-55]; ENSG00000138061, CYP1B1, cytochrome P450 family 1 subfamily B member 1, [Score=188, Expect=8e-53]} {Mouse: ENSMUSG00000003555, Cyp17a1, cytochrome P450, family 17, subfamily a, polypeptide 1, [RH, Score=197, Expect=2e-56]} {Dmel: FBgn0004959, phm, Peptidylglycine-alpha-hydroxylating monooxygenase, [Score=143, Expect=2e-36]} {Celegans: WBGene00016697, cyp-33C2, CYtochrome P450 family, [Score=160, Expect=3e-43]} {Smed: dd_Smed_v6_3919_0_1, dd_Smed_v6_3919_0_1, [Score=156, Expect=8e-42]} {RNA1509_5363} {RNA1310_11839} {RNA815_5371}

Mlig455_002304 {REF} {Length: 2481} {TRANSSPLICED} {Pfam: Cytochrome P450 [PF00067.24, score=324.8]} {Human: ENSG00000134716, CYP2J2, cytochrome P450 family 2 subfamily J member 2, [Score=194, Expect=3e-55]; ENSG00000138061, CYP1B1, cytochrome P450 family 1 subfamily B member 1, [Score=188, Expect=8e-53]} {Mouse: ENSMUSG00000003555, Cyp17a1, cytochrome P450, family 17, subfamily a, polypeptide 1, [RH, Score=197, Expect=2e-56]} {Dmel: FBgn0004959, phm, Peptidylglycine-alpha-hydroxylating monooxygenase, [Score=143, Expect=2e-36]} {Celegans: WBGene00016697, cyp-33C2, CYtochrome P450 family, [Score=160, Expect=3e-43]} {Smed: dd_Smed_v6_3919_0_1, dd_Smed_v6_3919_0_1, [Score=156, Expect=8e-42]} {RNA1509_5363} {RNA1310_11839, RNA1509_5363} {RNA1509_5363, RNA815_5371}
7. MligTC455_35886 941 19.59 Mlig455_013877

Neo: -

Age: Down-Up-Down, logFC(26M/2M)=-0.313

Region-specific R4: 1.689

Region-enriched R4: 1.129/0.00623

Regeneration-downregulated R4: -1.365

Regeneration-depleted R4: -1.365

 HRASLS2 2.541 - - - 0.977 0.815 0.749 Mlig455_013877 {REF} {Length: 1953} {Pfam: Lecithin retinol acyltransferase [PF04970.15, score=65.8]} {Human: ENSG00000133328, HRASLS2, HRAS like suppressor 2, [Score=52.4, Expect=7e-08]} {Mouse: ENSMUSG00000028003, Lrat, lecithin-retinol acyltransferase (phosphatidylcholine-retinol-O-acyltransferase), [RH, Score=50.4, Expect=5e-07]} {RNA1509_5071, RNA1509_56927} {RNA1310_21690, RNA1509_56927} {RNA1509_56927, RNA815_8872}
8. MligTC455_33383 1668 34.76 Mlig455_025532

Neo: -

Age: -

 DRC3 2.539 - 0.782 - 0.951 0.806 - Mlig455_025532 {REF} {Length: 2067} {Pfam: Leucine-rich repeat [PF14580.8, score=49.6]; Leucine Rich repeats (2 copies) [PF12799.9, score=41.9]; Leucine rich repeat [PF13855.8, score=35.4]} {Human: ENSG00000171962, DRC3, dynein regulatory complex subunit 3, [RH, Score=478, Expect=1e-164]} {Mouse: ENSMUSG00000056598, Drc3, dynein regulatory complex subunit 3, [RH, Score=488, Expect=8e-169]} {Dmel: FBgn0032163, TbCMF46, [RH, Score=274, Expect=4e-85]} {Celegans: WBGene00011637, sds-22, Protein phosphatase 1 regulatory subunit SDS22 homolog, [Score=74.7, Expect=2e-14]} {Smed: dd_Smed_v6_12541_0_1, dd_Smed_v6_12541_0_1, [RH, Score=492, Expect=8e-171]} {RNA1509_3282} {RNA1310_13530, RNA1509_3282} {RNA1509_3282, RNA815_1485.1}
9. MligTC455_46574 1300 27.09 Mlig455_064492, Mlig455_066053

Neo: -

Age: logFC(26M/2M)=-0.519

 2.529 - - - 0.793 0.779 0.957

Mlig455_064492 {REF} {Length: 994} {RNA1509_19156} {RNA1310_40992.1} {RNA815_20608}

Mlig455_066053 {REF} {Length: 994} {RNA1509_19156, RNA1509_29134} {RNA1310_40992.1, RNA1509_19156, RNA1509_29134} {RNA1509_19156, RNA1509_29134, RNA815_20608}
10. MligTC455_53692 2518 52.45 Mlig455_040714

Neo: -

Age: -

 2.517 - - - 0.962 0.753 0.802 Mlig455_040714 {REF} {Length: 844} {TRANSSPLICED} {RNA1509_41711, RNA1509_4919} {RNA1310_41175, RNA1509_41711, RNA1509_4919} {RNA1509_41711, RNA1509_4919, RNA815_21835}
11. MligTC455_38449 1049 21.85 Mlig455_057986

Neo: -

Age: logFC(26M/2M)=-0.283

 KIAA1257 2.467 0.766 - - 0.744 - 0.957 Mlig455_057986 {REF} {Length: 4685} {Pfam: Domain of unknown function (DUF4550) [PF15084.8, score=87.9]} {Human: ENSG00000114656, KIAA1257, KIAA1257, [RH, Score=334, Expect=8e-96]} {Smed: dd_Smed_v6_10058_0_1, dd_Smed_v6_10058_0_1, [RH, Score=244, Expect=6e-66]} {RNA1509_37750, RNA1509_4262} {RNA1310_1732, RNA1509_37750, RNA1509_4262} {RNA1509_37750, RNA1509_4262, RNA815_2079}
12. MligTC455_45527 2426 50.54 Mlig455_045403

Neo: -

Age: logFC(26M/2M)=-0.359

 GGT1 2.462 - - 0.790 0.971 - 0.701 Mlig455_045403 {REF} {Length: 2378} {Pfam: Gamma-glutamyltranspeptidase [PF01019.23, score=514.6]} {Human: ENSG00000100031, GGT1, gamma-glutamyltransferase 1, [RH, Score=403, Expect=2e-133]} {Mouse: ENSMUSG00000006345, Ggt1, gamma-glutamyltransferase 1, [RH, Score=389, Expect=5e-128]} {Dmel: FBgn0030796, CG4829, [RH, Score=332, Expect=1e-104]} {Celegans: WBGene00016906, C53D5.5, [RH, Score=372, Expect=7e-121]} {Smed: dd_Smed_v6_4591_0_1, dd_Smed_v6_4591_0_1, [RH, Score=425, Expect=6e-142]} {RNA1509_21080, RNA1509_24704, RNA1509_35437} {RNA1310_10883.2, RNA1509_21080, RNA1509_24704, RNA1509_35437} {RNA1509_21080, RNA1509_24704, RNA1509_35437, RNA815_3555.1}
13. MligTC455_43589 1667 34.74 Mlig455_002261

Neo: -

Age: -

 CYP2J2 1.895 - - - 0.960 0.935 - Mlig455_002261 {REF} {Length: 1924} {TRANSSPLICED} {Pfam: Cytochrome P450 [PF00067.24, score=326.4]} {Human: ENSG00000134716, CYP2J2, cytochrome P450 family 2 subfamily J member 2, [Score=196, Expect=6e-56]} {Mouse: ENSMUSG00000003555, Cyp17a1, cytochrome P450, family 17, subfamily a, polypeptide 1, [RH, Score=195, Expect=1e-55]} {Dmel: FBgn0004959, phm, Peptidylglycine-alpha-hydroxylating monooxygenase, [Score=144, Expect=4e-37]} {Celegans: WBGene00016697, cyp-33C2, CYtochrome P450 family, [Score=162, Expect=9e-44]} {Smed: dd_Smed_v6_3919_0_1, dd_Smed_v6_3919_0_1, [Score=156, Expect=9e-42]} {RNA1509_35172, RNA1509_5363} {RNA1310_11839, RNA1509_35172} {RNA1509_35172, RNA815_5371}
14. MligTC455_35442 359 7.49 Mlig455_037038

Neo: -

Age: -

 1.809 - - - 0.953 0.856 - Mlig455_037038 {REF} {Length: 2728} {Pfam: Acyltransferase family [PF01757.24, score=100.8]; Nose resistant-to-fluoxetine protein, N-terminal domain [PF20146.1, score=67.3]} {Mouse: ENSMUSG00000046610, Oacyl, O-acyltransferase like, [Score=169, Expect=1e-43]} {Dmel: FBgn0052645, CG32645, [Score=259, Expect=3e-74]} {Celegans: WBGene00007833, oac-6, O-ACyltransferase homolog, [RH, Score=235, Expect=1e-66]} {RNA1509_19999} {RNA1310_7490.1, RNA1509_19999} {RNA1509_19999, RNA815_17892}
15. MligTC455_19007 1131 23.57 Mlig455_044120

Neo: -

Age: -

 1.771 0.809 - - - 0.962 - Mlig455_044120 {REF} {Length: 3090} {TRANSSPLICED} {Smed: dd_Smed_v6_14979_0_1, dd_Smed_v6_14979_0_1, [RH, Score=170, Expect=8e-50]} {RNA1509_26326, RNA1509_52456} {RNA1310_23856, RNA1509_26326, RNA1509_52456} {RNA1509_26326, RNA1509_52456, RNA815_10081}
16. MligTC455_49414 575 11.98 Mlig455_012712

Neo: -

Age: -

 AMN1 1.757 - - - 0.799 0.958 - Mlig455_012712 {REF} {Length: 1408} {Pfam: Leucine Rich repeats (2 copies) [PF12799.9, score=29.0]; Leucine Rich repeat [PF13516.8, score=21.0]} {Human: ENSG00000151743, AMN1, antagonist of mitotic exit network 1 homolog, [RH, Score=141, Expect=8e-41]} {Mouse: ENSMUSG00000068250, Amn1, antagonist of mitotic exit network 1, [RH, Score=127, Expect=3e-35]} {Dmel: FBgn0038385, Fbxl7, F-box and leucine-rich repeat protein 7, [Score=63.2, Expect=5e-11]} {Celegans: WBGene00015350, fbxl-1, Uncharacterized F-box/LRR-repeat protein C02F5.7, [Score=61.6, Expect=9e-11]} {Smed: dd_Smed_v6_10175_0_1, dd_Smed_v6_10175_0_1, [RH, Score=108, Expect=2e-28]} {RNA1509_22504, RNA1509_39590, RNA1509_40159} {RNA1310_24489.2, RNA1509_22504, RNA1509_39590, RNA1509_40159} {RNA1509_22504, RNA1509_39590, RNA1509_40159, RNA815_10701}
17. MligTC455_50280 992 20.66 Mlig455_026022

Neo: -

Age: Down-Up-Down, logFC(26M/2M)=-0.315

 SYNGR2 1.751 - - - - 0.951 0.800 Mlig455_026022 {REF} {Length: 1457} {Pfam: Membrane-associating domain [PF01284.25, score=58.8]} {Human: ENSG00000108639, SYNGR2, synaptogyrin 2, [RH, Score=133, Expect=4e-38]} {Mouse: ENSMUSG00000048277, Syngr2, synaptogyrin 2, [RH, Score=135, Expect=5e-39]} {Dmel: FBgn0033876, Syngr, Synaptogyrin, [Score=134, Expect=2e-38]} {Celegans: WBGene00004912, sng-1, Synaptogyrin homolog 1, [Score=78.2, Expect=2e-17]} {Smed: dd_Smed_v6_6478_0_1, dd_Smed_v6_6478_0_1, [Score=174, Expect=4e-54]} {RNA1509_17036} {RNA1310_20206.1, RNA1509_17036} {RNA1509_17036, RNA815_11114}
18. MligTC455_50462 697 14.52 Mlig455_007876, Mlig455_007979, Mlig455_021146

Neo: -

Age: logFC(26M/2M)=0.575

Region-enriched R4: 1.899/0.03615

 1.747 - - - 0.955 0.792 -

Mlig455_007876 {REF} {Length: 1922} {RNA1509_25746} {RNA1310_24431.1} {RNA815_8813.1}

Mlig455_007979 {REF} {Length: 2471} {RNA1509_25746} {RNA1310_24431.1} {RNA815_8813.1}

Mlig455_021146 {REF} {Length: 2129} {RNA1509_25746} {RNA1310_24431.1} {RNA815_8813.1}
19. MligTC455_24519 1035 21.55 Mlig455_026505

Neo: -

Age: Up-Down-Down

Region-enriched R2: 1.364/0.03756

 DNAH10 1.743 - 0.757 - - 0.986 - Mlig455_026505 {REF} {Length: 14733} {Pfam: Hydrolytic ATP binding site of dynein motor region [PF12774.9, score=521.9]; Dynein heavy chain, N-terminal region 2 [PF08393.15, score=390.5]; P-loop containing dynein motor region D4 [PF12780.9, score=341.0]; Dynein heavy chain C-terminal domain [PF18199.3, score=306.8]; ATP-binding dynein motor region [PF12781.9, score=282.5]; P-loop containing dynein motor region [PF12775.9, score=264.2]; Microtubule-binding stalk of dynein motor [PF12777.9, score=214.4]; Dynein heavy chain AAA lid domain [PF18198.3, score=174.9]; Dynein heavy chain region D6 P-loop domain [PF03028.17, score=142.3]; AAA domain (dynein-related subfamily) [PF07728.16, score=92.9]; Dynein heavy chain AAA lid domain [PF17852.3, score=81.8]; AAA+ lid domain [PF17857.3, score=63.2]; AAA domain [PF13401.8, score=44.6]; ATPase family associated with various cellular activities (AAA) [PF00004.31, score=34.7]; AAA ATPase domain [PF13191.8, score=31.6]; AAA domain [PF13238.8, score=24.7]; MoxR domain in the MoxR-vWA-beta-propeller ternary systems [PF20030.1, score=21.4]; Sigma-54 interaction domain [PF00158.28, score=21.3]} {Human: ENSG00000281935, DNAH10, dynein axonemal heavy chain 10, [RH, Score=4662, Expect=0.0]} {Mouse: ENSMUSG00000038011, Dnah10, dynein, axonemal, heavy chain 10, [Score=4676, Expect=0.0]} {Dmel: FBgn0013813, Dhc98D, Dynein heavy chain at 89D, [RH, Score=3860, Expect=0.0]} {Celegans: WBGene00000962, dhc-1, Dynein heavy chain, cytoplasmic, [Score=1408, Expect=0.0]} {Smed: dd_Smed_v6_5169_0_1, dd_Smed_v6_5169_0_1, [RH, Score=4698, Expect=0.0]} {RNA1509_19877, RNA1509_2715, RNA1509_29080, RNA1509_395} {RNA1310_40.1, RNA1509_19877, RNA1509_2715, RNA1509_29080, RNA1509_395} {RNA1509_19877, RNA1509_2715, RNA1509_29080, RNA1509_395, RNA815_20}
20. MligTC455_48616 1121 23.36 Mlig455_045633

Neo: -

Age: -

 CCDC81 1.728 - - - - 0.955 0.773 Mlig455_045633 {REF} {Length: 4045} {Pfam: CCDC81 eukaryotic HU domain 2 [PF18289.3, score=77.2]; CCDC81 eukaryotic HU domain 1 [PF14908.8, score=72.1]; Bacterial DNA-binding protein [PF00216.23, score=21.4]; HU domain fused to wHTH, Ig, or Glycine-rich motif [PF18291.3, score=18.8]} {Human: ENSG00000149201, CCDC81, coiled-coil domain containing 81, [RH, Score=242, Expect=6e-70]} {Mouse: ENSMUSG00000039391, Ccdc81, coiled-coil domain containing 81, [RH, Score=217, Expect=5e-61]} {Smed: dd_Smed_v6_6753_0_1, dd_Smed_v6_6753_0_1, [RH, Score=586, Expect=0.0]} {RNA1509_2273} {RNA1310_2378} {RNA815_610}
21. MligTC455_28580 2302 47.96 Mlig455_017982

Neo: -

Age: logFC(26M/2M)=-0.378

 1.708 - - 0.752 0.956 - - Mlig455_017982 {REF} {Length: 2973} {Pfam: Rel homology DNA-binding domain [PF00554.24, score=54.0]} {RNA1509_2844} {RNA1310_12994} {RNA815_4102.2}
22. MligTC455_44236 8742 182.13 Mlig455_003084, Mlig455_062811

Neo: -

Age: -

 RSPH3 1.695 - - - - 0.961 0.734

Mlig455_003084 {REF} {Length: 2211} {Pfam: Radial spoke protein 3 [PF06098.13, score=416.8]} {Human: ENSG00000130363, RSPH3, radial spoke head 3 homolog, [RH, Score=379, Expect=7e-129]} {Mouse: ENSMUSG00000023806, Rsph3b, radial spoke 3B homolog (Chlamydomonas), [RH, Score=319, Expect=7e-104]; ENSMUSG00000073471, Rsph3a, radial spoke 3A homolog (Chlamydomonas), [RH, Score=318, Expect=5e-104]} {Dmel: FBgn0052392, CG32392, [RH, Score=187, Expect=1e-54]} {Smed: dd_Smed_v6_2287_0_1, dd_Smed_v6_2287_0_1, [RH, Score=454, Expect=9e-159]} {RNA1509_928} {RNA1310_13874} {RNA815_5098}

Mlig455_062811 {REF} {Length: 2209} {Pfam: Radial spoke protein 3 [PF06098.13, score=416.8]} {Human: ENSG00000130363, RSPH3, radial spoke head 3 homolog, [RH, Score=379, Expect=7e-129]} {Mouse: ENSMUSG00000023806, Rsph3b, radial spoke 3B homolog (Chlamydomonas), [RH, Score=319, Expect=7e-104]; ENSMUSG00000073471, Rsph3a, radial spoke 3A homolog (Chlamydomonas), [RH, Score=318, Expect=5e-104]} {Dmel: FBgn0052392, CG32392, [RH, Score=187, Expect=1e-54]} {Smed: dd_Smed_v6_2287_0_1, dd_Smed_v6_2287_0_1, [RH, Score=454, Expect=9e-159]} {RNA1509_928} {RNA1310_13874, RNA1509_928} {RNA1509_928, RNA815_5098}
23. MligTC455_47284 1985 41.36 Mlig455_035332, Mlig455_035375

Neo: -

Age: Down-Up-Up

Region-enriched R2: 2.254/0.00001

 PANK4 1.686 - 0.731 - - 0.955 -

Mlig455_035332 {REF} {Length: 1878} {Pfam: Fumble [PF03630.16, score=120.1]} {Human: ENSG00000273494, PANK4, pantothenate kinase 4, [Score=106, Expect=2e-24]; ENSG00000157881, PANK4, pantothenate kinase 4, [Score=106, Expect=2e-24]} {Mouse: ENSMUSG00000029056, Pank4, pantothenate kinase 4, [Score=102, Expect=5e-23]} {Dmel: FBgn0011205, fbl, fumble, [Score=73.6, Expect=3e-14]} {Celegans: WBGene00004068, pnk-1, PaNtothenate Kinase, [Score=68.2, Expect=2e-12]} {Smed: dd_Smed_v6_994_0_1, dd_Smed_v6_994_0_1, [Score=152, Expect=9e-43]} {RNA1509_12908, RNA1509_25097, RNA1509_42106} {RNA1310_12126.1, RNA1509_12908, RNA1509_25097, RNA1509_42106} {RNA1509_12908, RNA1509_25097, RNA1509_42106, RNA815_8093.2}

Mlig455_035375 {REF} {Length: 1877} {Pfam: Fumble [PF03630.16, score=118.3]} {Human: ENSG00000157881, PANK4, pantothenate kinase 4, [Score=101, Expect=1e-22]; ENSG00000273494, PANK4, pantothenate kinase 4, [Score=101, Expect=9e-23]} {Mouse: ENSMUSG00000029056, Pank4, pantothenate kinase 4, [Score=97.1, Expect=2e-21]} {Dmel: FBgn0011205, fbl, fumble, [Score=71.6, Expect=1e-13]} {Celegans: WBGene00004068, pnk-1, PaNtothenate Kinase, [Score=66.2, Expect=9e-12]} {Smed: dd_Smed_v6_994_0_1, dd_Smed_v6_994_0_1, [Score=148, Expect=5e-41]} {RNA1509_12908} {RNA1310_12126.1} {RNA815_8093.2}
24. MligTC455_16583 1882 39.21 Mlig455_035277

Neo: -

Age: -

 TTC26 0.981 - - - - 0.981 - Mlig455_035277 {REF} {Length: 2402} {Pfam: Tetratricopeptide repeat [PF14559.8, score=65.1]; Anaphase-promoting complex, cyclosome, subunit 3 [PF12895.9, score=50.0]; Tetratricopeptide repeat [PF07719.19, score=36.6]; Tetratricopeptide repeat [PF13371.8, score=34.4]; Tetratricopeptide repeat [PF13428.8, score=34.3]; Tetratricopeptide repeat [PF00515.30, score=25.1]; Tetratricopeptide repeat [PF13174.8, score=24.7]; Tetratricopeptide repeat [PF13181.8, score=24.7]; Tetratricopeptide repeat [PF13176.8, score=21.5]} {Human: ENSG00000105948, TTC26, tetratricopeptide repeat domain 26, [RH, Score=871, Expect=0.0]} {Mouse: ENSMUSG00000056832, Ttc26, tetratricopeptide repeat domain 26, [RH, Score=878, Expect=0.0]} {Dmel: FBgn0038358, CG4525, [RH, Score=577, Expect=0.0]} {Celegans: WBGene00001129, dyf-13, Intraflagellar transport protein 56 homolog, [RH, Score=399, Expect=1e-131]} {Smed: dd_Smed_v6_12618_0_1, dd_Smed_v6_12618_0_1, [RH, Score=868, Expect=0.0]} {RNA1509_27276, RNA1509_35708, RNA1509_3925} {RNA1310_10479, RNA1509_27276, RNA1509_35708, RNA1509_3925} {RNA1509_27276, RNA1509_35708, RNA1509_3925, RNA815_3824}
25. MligTC455_16582 2436 50.75 Mlig455_035232

Neo: -

Age: Down-Down-Down

 TTC26 0.975 - - - - 0.975 - Mlig455_035232 {REF} {Length: 2109} {Pfam: Tetratricopeptide repeat [PF14559.8, score=65.1]; Anaphase-promoting complex, cyclosome, subunit 3 [PF12895.9, score=50.0]; Tetratricopeptide repeat [PF07719.19, score=36.6]; Tetratricopeptide repeat [PF13371.8, score=34.4]; Tetratricopeptide repeat [PF13428.8, score=34.3]; Tetratricopeptide repeat [PF00515.30, score=25.1]; Tetratricopeptide repeat [PF13174.8, score=24.7]; Tetratricopeptide repeat [PF13181.8, score=24.7]; Tetratricopeptide repeat [PF13176.8, score=21.5]} {Human: ENSG00000105948, TTC26, tetratricopeptide repeat domain 26, [RH, Score=871, Expect=0.0]} {Mouse: ENSMUSG00000056832, Ttc26, tetratricopeptide repeat domain 26, [RH, Score=878, Expect=0.0]} {Dmel: FBgn0038358, CG4525, [RH, Score=577, Expect=0.0]} {Celegans: WBGene00001129, dyf-13, Intraflagellar transport protein 56 homolog, [RH, Score=399, Expect=1e-131]} {Smed: dd_Smed_v6_12618_0_1, dd_Smed_v6_12618_0_1, [RH, Score=868, Expect=0.0]} {RNA1509_3925} {RNA1310_10479} {RNA815_3824}
26. MligTC455_42965 425 8.85 Mlig455_053567

Neo: -

Age: Down-Up-Down, logFC(26M/2M)=-0.299

 SPATA6L 0.975 - - - - - 0.975 Mlig455_053567 {REF} {Length: 2164} {TRANSSPLICED} {Pfam: Spermatogenesis-assoc protein 6 [PF14909.8, score=127.3]} {Human: ENSG00000106686, SPATA6L, spermatogenesis associated 6 like, [RH, Score=96.7, Expect=5e-22]} {Mouse: ENSMUSG00000064202, 4430402I18Rik, RIKEN cDNA 4430402I18 gene, [RH, Score=98.6, Expect=3e-22]} {Smed: dd_Smed_v6_10543_0_1, dd_Smed_v6_10543_0_1, [RH, Score=191, Expect=2e-57]} {RNA1509_23645} {RNA1310_24559} {RNA815_31401}
27. MligTC455_52491 413 8.61 Mlig455_041906

Neo: -

Age: logFC(26M/2M)=-0.855

Region-specific R2: 3.229

Region-enriched R2: 2.944/0.00036

 0.975 - - - - - 0.975 Mlig455_041906 {REF} {Length: 712} {RNA1509_31700} {RNA1310_225.1, RNA1509_31700} {RNA1509_31700, RNA815_107.1}
28. MligTC455_37677 438 9.12 Mlig455_032872

Neo: -

Age: -

 0.972 - - - - 0.972 - Mlig455_032872 {REF} {Length: 906} {NoTransDecoderORF} {RNA1509_53375} {RNA1310_18706} {RNA815_8584.1}
29. MligTC455_08873 198 4.13 Mlig455_022707

Neo: -

Age: -

 0.971 - - - - - 0.971 Mlig455_022707 {REF} {Length: 1291} {NoTransDecoderORF} {RNA1509_54108} {RNA1310_112068, RNA1509_54108} {RNA1509_54108, RNA815_23859}
30. MligTC455_30749 730 15.2 Mlig455_027647, Mlig455_070947

Neo: -

Age: Up-Down-Down, logFC(26M/2M)=-0.459

 TRPM7 0.964 - - - - 0.964 -

Mlig455_027647 {REF} {Length: 5803} {Pfam: Ankyrin repeats (3 copies) [PF12796.9, score=49.1]; Ankyrin repeats (many copies) [PF13637.8, score=48.0]; Ankyrin repeats (many copies) [PF13857.8, score=41.9]; Ion transport protein [PF00520.33, score=35.3]; Ankyrin repeat [PF13606.8, score=21.9]; Ankyrin repeat [PF00023.32, score=21.5]} {Human: ENSG00000092439, TRPM7, transient receptor potential cation channel subfamily M member 7, [Score=85.5, Expect=5e-16]} {Mouse: ENSMUSG00000027365, Trpm7, transient receptor potential cation channel, subfamily M, member 7, [Score=87.0, Expect=1e-16]} {Dmel: FBgn0265194, Trpm, Transient receptor potential cation channel, subfamily M, [Score=82.4, Expect=2e-15]} {Celegans: WBGene00001651, gon-2, Transient receptor potential channel, [Score=67.0, Expect=8e-11]} {Smed: dd_Smed_v6_26251_0_1, dd_Smed_v6_26251_0_1, [Score=100, Expect=2e-21]} {RNA1509_11072} {RNA1310_3939.1} {RNA815_478}

Mlig455_070947 {REF} {Length: 5801} {Pfam: Ankyrin repeats (3 copies) [PF12796.9, score=48.0]; Ankyrin repeats (many copies) [PF13637.8, score=44.0]; Ankyrin repeats (many copies) [PF13857.8, score=43.3]; Ankyrin repeat [PF00023.32, score=19.6]} {RNA1509_11072} {RNA1310_3939.1, RNA1509_11072} {RNA1509_11072, RNA815_478}
31. MligTC455_32306 476 9.91 Mlig455_011146

Neo: -

Age: Up-Down-Down, logFC(26M/2M)=-0.714

 0.964 - - - - 0.964 - Mlig455_011146 {REF} {Length: 15000} {RNA1509_4044, RNA1509_4722} {RNA1310_655.1, RNA1509_4044} {RNA1509_4044, RNA815_335.1}
32. MligTC455_39417 2459 51.22 Mlig455_053947

Neo: -

Age: Down-Up-Down, logFC(26M/2M)=-0.367

 0.964 - - - - 0.964 - Mlig455_053947 {REF} {Length: 3184} {RNA1509_19407} {RNA1310_3937} {RNA815_2591.1}
33. MligTC455_52249 1365 28.44 Mlig455_007872

Neo: -

Age: Down-Down-Up

Region-enriched R2: 1.111/0.04280

 0.963 - - - - 0.963 - Mlig455_007872 {REF} {Length: 2081} {Pfam: Transmembrane protein 237 [PF15383.8, score=91.3]} {Mouse: ENSMUSG00000038079, Tmem237, transmembrane protein 237, [Score=55.1, Expect=1e-07]} {RNA1509_6211} {RNA1310_13658, RNA1509_6211} {RNA1509_6211, RNA815_1318.1}
34. MligTC455_28330 214 4.46 Mlig455_032193

Neo: -

Age: -

 0.961 - - - - 0.961 - Mlig455_032193 {REF} {Length: 7051} {TRANSSPLICED} {Pfam: Adenovirus late L2 mu core protein (Protein X) [PF05829.14, score=30.0]} {RNA1509_28643} {RNA1310_576.1} {RNA815_2733.1}
35. MligTC455_06949 100 2.07 Mlig455_043277

Neo: -

Age: -

 0.957 - - - - - 0.957 Mlig455_043277 {REF} {Length: 1489} {TRANSSPLICED} {RNA1509_49118} {RNA1310_24738.1} {RNA815_3785.1}
36. MligTC455_24735 1026 21.38 Mlig455_003136

Neo: -

Age: logFC(26M/2M)=-0.296

 VWA3B 0.957 - - - - 0.957 - Mlig455_003136 {REF} {Length: 2787} {Pfam: Domain of unknown function (DUF4537) [PF15057.8, score=231.3]; DNA repair protein Crb2 Tudor domain [PF18115.3, score=42.4]; SGF29 tudor-like domain [PF07039.13, score=39.7]; Jumonji domain-containing protein 2A Tudor domain [PF18104.3, score=33.4]; SPX domain [PF03105.21, score=20.6]} {Human: ENSG00000168658, VWA3B, von Willebrand factor A domain containing 3B, [RH, Score=79.7, Expect=4e-15]} {RNA1509_5206} {RNA1310_5951.1, RNA1509_5206} {RNA1509_5206, RNA815_1760.1}
37. MligTC455_02940 663 13.8 Mlig455_062945

Neo: -

Age: -

 0.955 - - - - 0.955 - Mlig455_062945 {REF} {Length: 642} {NoTransDecoderORF} {RNA1509_7018} {RNA1310_17786} {RNA815_7590}
38. MligTC455_28145 71 1.48 Mlig455_024749

Neo: -

Age: -

 0.955 - - - - 0.955 - Mlig455_024749 {REF} {Length: 1469} {TRANSSPLICED} {NoTransDecoderORF} {RNA1509_13222} {RNA1310_34828.2} {RNA815_11419.1}
39. MligTC455_30283 243 5.06 Mlig455_050829

Neo: -

Age: -

 0.953 - - - - 0.953 - Mlig455_050829 {REF} {Length: 1893} {NoTransDecoderORF} {RNA1509_32404} {RNA1310_58903} {RNA815_47584}
40. MligTC455_44030 257 5.36 Mlig455_035454

Neo: -

Age: Down-Up-Down

 0.953 - - - - - 0.953 Mlig455_035454 {REF} {Length: 2210} {Pfam: Lectin C-type domain [PF00059.23, score=25.6]} {RNA1509_32990} {RNA1310_18199, RNA1509_32990} {RNA1509_32990, RNA815_7340}
41. MligTC455_14484 84 1.75 Mlig455_033326

Neo: -

Age: -

Regeneration-upregulated R2: 3.966

Regeneration-enriched R2: 3.966

 0.952 - - - - 0.952 - Mlig455_033326 {REF} {Length: 379} {NoTransDecoderORF} {RNA1509_9817} {RNA1310_60793} {RNA815_8584.1}
42. MligTC455_31789 97 2.02 Mlig455_052721

Neo: -

Age: Up-Down-Down

 TRIM3 0.952 - - - - 0.952 - Mlig455_052721 {REF} {Length: 4303} {TRANSSPLICED} {Pfam: NHL repeat [PF01436.23, score=19.4]} {Human: ENSG00000110171, TRIM3, tripartite motif containing 3, [Score=63.9, Expect=4e-10]; ENSG00000109654, TRIM2, tripartite motif containing 2, [Score=63.5, Expect=5e-10]} {Mouse: ENSMUSG00000036989, Trim3, tripartite motif-containing 3, [Score=63.9, Expect=2e-10]; ENSMUSG00000027993, Trim2, tripartite motif-containing 2, [Score=63.5, Expect=3e-10]} {RNA1509_23300} {RNA1310_14145.1} {RNA815_3900.1}
43. MligTC455_32309 828 17.24 Mlig455_050857

Neo: -

Age: Up-Down-Down, logFC(26M/2M)=-0.573

 ZAN 0.952 - - - - 0.952 - Mlig455_050857 {REF} {Length: 9674} {Human: ENSG00000146839, ZAN, zonadhesin (gene/pseudogene), [Score=57.8, Expect=5e-07]} {RNA1509_20499, RNA1509_31314, RNA1509_37922, RNA1509_38195, RNA1509_458, RNA1509_7032} {RNA1310_3777.1, RNA1509_20499, RNA1509_31314, RNA1509_37922, RNA1509_38195, RNA1509_7032} {RNA1509_20499, RNA1509_31314, RNA1509_37922, RNA1509_38195, RNA1509_7032, RNA815_49.1}
44. MligTC455_44462 171 3.56 Mlig455_019811

Neo: -

Age: Down-Up-Down

 0.952 - - - - 0.952 - Mlig455_019811 {REF} {Length: 1980} {RNA1509_25005} {RNA1310_2380} {RNA815_20909.1}
45. MligTC455_32430 1195 24.9 Mlig455_011237

Neo: -

Age: Up-Down-Down

Region-enriched R8: 2.184/0.00516

 MYO7A 0.951 - - - - 0.951 - Mlig455_011237 {REF} {Length: 9218} {TRANSSPLICED} {Pfam: Myosin head (motor domain) [PF00063.23, score=618.5]; MyTH4 domain [PF00784.19, score=207.6]; FERM central domain [PF00373.20, score=76.8]; IQ calmodulin-binding motif [PF00612.29, score=52.2]; Variant SH3 domain [PF14604.8, score=31.6]; Variant SH3 domain [PF07653.19, score=23.3]; FERM N-terminal domain [PF09379.12, score=19.5]} {Human: ENSG00000137474, MYO7A, myosin VIIA, [RH, Score=2524, Expect=0.0]} {Mouse: ENSMUSG00000030761, Myo7a, myosin VIIA, [RH, Score=2538, Expect=0.0]} {Dmel: FBgn0000317, ck, crinkled, [RH, Score=2582, Expect=0.0]} {Celegans: WBGene00002039, hum-6, Unconventional myosin heavy chain 6, [RH, Score=1936, Expect=0.0]} {Smed: dd_Smed_v6_5823_0_1, dd_Smed_v6_5823_0_1, [RH, Score=2107, Expect=0.0]} {RNA1509_1498, RNA1509_16258, RNA1509_17857, RNA1509_27893} {RNA1310_167.1, RNA1509_1498, RNA1509_16258, RNA1509_17857, RNA1509_27893} {RNA1509_1498, RNA1509_16258, RNA1509_17857, RNA1509_27893, RNA815_130.1}
46. MligTC455_21593 425 8.84 Mlig455_013101, Mlig455_013193

Neo: -

Age: Down-Down-Up

 0.95 - - - - 0.950 -

Mlig455_013101 {REF} {Length: 542} {RNA1509_56841} {RNA1310_116243} {RNA815_22112}

Mlig455_013193 {REF} {Length: 528} {RNA1509_56841} {RNA1310_116243} {RNA815_22112}
47. MligTC455_31854 186 3.88 Mlig455_041999

Neo: -

Age: Down-Up-Down, logFC(26M/2M)=-0.550

 0.95 - - - - - 0.950 Mlig455_041999 {REF} {Length: 2238} {Pfam: Autophagy-related protein 27 [PF09451.12, score=37.0]; Mannose-6-phosphate receptor [PF02157.17, score=25.3]} {RNA1509_47393} {RNA1310_19973, RNA1509_47393} {RNA1509_47393, RNA815_5295}
48. MligTC455_46750 122 2.55 Mlig455_009720

Neo: -

Age: Up-Down-Down

 FAXC 0.95 - - - - - 0.950 Mlig455_009720 {REF} {Length: 4246} {Pfam: Glutathione S-transferase N-terminal domain [PF17172.6, score=81.9]; Glutathione S-transferase, C-terminal domain [PF17171.6, score=61.5]; Glutathione S-transferase, C-terminal domain [PF13410.8, score=23.8]; Outer mitochondrial membrane transport complex protein [PF10568.11, score=21.4]} {Human: ENSG00000146267, FAXC, failed axon connections homolog, [Score=113, Expect=6e-28]} {Mouse: ENSMUSG00000028246, Faxc, failed axon connections homolog, [Score=114, Expect=3e-28]} {Dmel: FBgn0014163, fax, failed axon connections, [RH, Score=161, Expect=5e-46]} {Celegans: WBGene00012987, Y48C3A.3, [RH, Score=178, Expect=2e-53]} {Smed: dd_Smed_v6_1736_0_1, dd_Smed_v6_1736_0_1, [Score=203, Expect=6e-64]} {RNA1509_17322} {RNA1310_2517.1} {RNA815_2965}

Refine r cutoff to:    Show

Berezikov Lab - 2020-2021 © ERIBA