Data search
Results for MligTC455_49556
| Cluster | Total UMI counts | Global CPM | Transcripts | Categories | Human homolog | Annotation |
|---|---|---|---|---|---|---|
| MligTC455_49556 | 198 | 4.12 | Mlig455_050578 | Neo: - Age: Down-Up-Down |
CXXC1 | Mlig455_050578 {REF} {Length: 4819} {TRANSSPLICED} {Pfam: PHD-finger [PF00628.31, score=40.5]; CXXC zinc finger domain [PF02008.22, score=35.1]} {Human: ENSG00000154832, CXXC1, CXXC finger protein 1, [RH, Score=84.3, Expect=1e-17]} {Mouse: ENSMUSG00000024560, Cxxc1, CXXC finger 1 (PHD domain), [Score=83.6, Expect=3e-16]} {Dmel: FBgn0030120, CG17440, [Score=87.0, Expect=4e-18]} {Celegans: WBGene00009180, nurf-1, Nucleosome-remodeling factor subunit NURF301-like, [Score=58.2, Expect=1e-08]} {Smed: dd_Smed_v6_15324_0_2, dd_Smed_v6_15324_0_2, [Score=90.9, Expect=3e-20]} {RNA1509_12196} {RNA1310_12173, RNA1509_12196} {RNA1509_12196, RNA815_16181} |
Cumulative graph for MligTC455_49556
Region-enriched expression
| Region | logFC | logCPM | Pvalue | FDR | Specificity |
|---|---|---|---|---|---|
| RegionR1 | 1.579 | 2.606 | 0.39637 | 1.00000 | |
| RegionR2 | -0.858 | 2.606 | 0.29531 | 0.68400 | |
| RegionR3 | -1.826 | 2.606 | 0.02955 | 0.29463 | |
| RegionR4 | 1.963 | 2.606 | 0.02151 | 0.10753 | |
| RegionR5 | 1.42 | 2.606 | 0.01469 | 0.07701 | |
| RegionR6 | 0.304 | 2.606 | 0.64477 | 1.00000 | |
| RegionR7 | -1.755 | 2.606 | 0.16463 | 0.74888 | |
| RegionR8 | -0.828 | 2.606 | 0.55966 | 1.00000 |
Regeneration-enriched expression
| Region | logFC | logCPM | PValue | FDR | Specificity |
|---|---|---|---|---|---|
| RegenerationR1 | -6.007 | 2.606 | 0.24836 | 0.96633 | |
| RegenerationR2 | 0.323 | 2.606 | 0.61166 | 0.91997 | |
| RegenerationR3 | 1.6 | 2.606 | 0.06438 | 0.42774 | |
| RegenerationR4 | -0.419 | 2.606 | 0.57276 | 0.90278 | |
| RegenerationR5 | -0.203 | 2.606 | 0.73107 | 0.96439 | |
| RegenerationR6 | 0.614 | 2.606 | 0.38541 | 0.72589 | |
| RegenerationBL | 1.526 | 2.606 | 0.09377 | 0.36009 | |
| RegenerationTP | 1.854 | 2.606 | 0.09093 | 0.47349 |
Genes with expression patterns similar to MligTC455_49556
| Nr. | Cluster | Total UMI counts | Global CPM | Transcripts | Categories | Human homolog | Σ Spearman correlations | Int1 | Int2 | Int3 | Reg1 | Reg2 | Reg3 | Annotation |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1. | MligTC455_49556 | 198 | 4.12 | Mlig455_050578 | Neo: - Age: Down-Up-Down |
CXXC1 | 5 | 1.000 | - | 1.000 | 1.000 | 1.000 | 1.000 | Mlig455_050578 {REF} {Length: 4819} {TRANSSPLICED} {Pfam: PHD-finger [PF00628.31, score=40.5]; CXXC zinc finger domain [PF02008.22, score=35.1]} {Human: ENSG00000154832, CXXC1, CXXC finger protein 1, [RH, Score=84.3, Expect=1e-17]} {Mouse: ENSMUSG00000024560, Cxxc1, CXXC finger 1 (PHD domain), [Score=83.6, Expect=3e-16]} {Dmel: FBgn0030120, CG17440, [Score=87.0, Expect=4e-18]} {Celegans: WBGene00009180, nurf-1, Nucleosome-remodeling factor subunit NURF301-like, [Score=58.2, Expect=1e-08]} {Smed: dd_Smed_v6_15324_0_2, dd_Smed_v6_15324_0_2, [Score=90.9, Expect=3e-20]} {RNA1509_12196} {RNA1310_12173, RNA1509_12196} {RNA1509_12196, RNA815_16181} |
| 2. | MligTC455_25480 | 454 | 9.45 | Mlig455_002934 | Neo: - Age: - |
ITK | 1.676 | - | - | 0.717 | - | - | 0.959 | Mlig455_002934 {REF} {Length: 6820} {TRANSSPLICED} {Pfam: Protein tyrosine and serine/threonine kinase [PF07714.19, score=267.9]; Protein kinase domain [PF00069.27, score=133.8]; SH2 domain [PF00017.26, score=77.3]; PH domain [PF00169.31, score=32.0]; Variant SH3 domain [PF14604.8, score=28.5]; SH3 domain [PF00018.30, score=27.5]; BTK motif [PF00779.21, score=24.1]; SH3 domain [PF17902.3, score=18.6]} {Human: ENSG00000113263, ITK, IL2 inducible T cell kinase, [Score=432, Expect=5e-143]; ENSG00000010671, BTK, Bruton tyrosine kinase, [Score=427, Expect=2e-140]; ENSG00000135605, TEC, tec protein tyrosine kinase, [Score=416, Expect=2e-136]} {Mouse: ENSMUSG00000020395, Itk, IL2 inducible T cell kinase, [RH, Score=420, Expect=3e-138]} {Dmel: FBgn0003502, Btk29A, Btk family kinase at 29A, [RH, Score=451, Expect=2e-148]} {Celegans: WBGene00005077, src-1, Tyrosine protein-kinase src-1, [Score=294, Expect=7e-92]} {Smed: dd_Smed_v6_4818_0_1, dd_Smed_v6_4818_0_1, [RH, Score=641, Expect=0.0]} {RNA1509_14892} {RNA1310_2046, RNA1509_14892} {RNA1509_14892, RNA815_350} |
| 3. | MligTC455_35474 | 846 | 17.62 | Mlig455_052170, Mlig455_060717 | Neo: - Age: - |
RSU1 | 1.662 | - | - | - | 0.953 | - | 0.709 | Mlig455_052170 {REF} {Length: 1611} {TRANSSPLICED} {Pfam: Leucine rich repeat [PF13855.8, score=78.4]; Leucine Rich repeats (2 copies) [PF12799.9, score=55.9]; Leucine Rich Repeat [PF00560.35, score=37.6]} {Human: ENSG00000148484, RSU1, Ras suppressor protein 1, [RH, Score=288, Expect=3e-97]} {Mouse: ENSMUSG00000026727, Rsu1, Ras suppressor protein 1, [RH, Score=283, Expect=1e-95]} {Dmel: FBgn0028546, ics, icarus, [RH, Score=264, Expect=4e-88]} {Celegans: WBGene00007924, rsu-1, Ras SUppressor homolog, [RH, Score=261, Expect=1e-87]} {Smed: dd_Smed_v6_2259_0_1, dd_Smed_v6_2259_0_1, [RH, Score=269, Expect=1e-90]} {RNA1509_19119, RNA1509_42064} {RNA1310_19340, RNA1509_42064} {RNA1509_42064, RNA815_8744} Mlig455_060717 {REF} {Length: 1612} {TRANSSPLICED} {Pfam: Leucine rich repeat [PF13855.8, score=81.7]; Leucine Rich repeats (2 copies) [PF12799.9, score=55.2]; Leucine Rich Repeat [PF00560.35, score=35.9]} {Human: ENSG00000148484, RSU1, Ras suppressor protein 1, [RH, Score=288, Expect=1e-97]} {Mouse: ENSMUSG00000026727, Rsu1, Ras suppressor protein 1, [RH, Score=284, Expect=4e-96]} {Dmel: FBgn0028546, ics, icarus, [RH, Score=264, Expect=4e-88]} {Celegans: WBGene00007924, rsu-1, Ras SUppressor homolog, [RH, Score=263, Expect=6e-88]} {Smed: dd_Smed_v6_2259_0_1, dd_Smed_v6_2259_0_1, [RH, Score=271, Expect=3e-91]} {RNA1509_19119} {RNA1310_19340, RNA1509_19119} {RNA1509_19119, RNA815_8744} |
| 4. | MligTC455_43197 | 2985 | 62.18 | Mlig455_005091, Mlig455_005219 | Neo: - Age: - Regeneration-upregulated BL: 1.707 Regeneration-enriched BL: 1.707 |
SMARCD1 | 0.969 | - | - | - | 0.969 | - | - | Mlig455_005091 {REF} {Length: 2227} {Pfam: SWIB/MDM2 domain [PF02201.20, score=55.0]} {Human: ENSG00000066117, SMARCD1, SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 1, [RH, Score=491, Expect=7e-170]} {Mouse: ENSMUSG00000023018, Smarcd1, SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 1, [RH, Score=491, Expect=9e-170]} {Dmel: FBgn0025463, Bap60, Brahma associated protein 60kD, [RH, Score=473, Expect=3e-163]} {Celegans: WBGene00044072, ham-3, [RH, Score=420, Expect=2e-143]} {Smed: dd_Smed_v6_3916_0_1, dd_Smed_v6_3916_0_1, [RH, Score=429, Expect=5e-147]} {RNA1509_5497} {RNA1310_11706, RNA1509_5497} {RNA1509_5497, RNA815_6713} Mlig455_005219 {REF} {Length: 2215} {TRANSSPLICED} {Pfam: SWIB/MDM2 domain [PF02201.20, score=55.0]} {Human: ENSG00000066117, SMARCD1, SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 1, [RH, Score=491, Expect=7e-170]} {Mouse: ENSMUSG00000023018, Smarcd1, SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 1, [RH, Score=491, Expect=9e-170]} {Dmel: FBgn0025463, Bap60, Brahma associated protein 60kD, [RH, Score=473, Expect=3e-163]} {Celegans: WBGene00044072, ham-3, [RH, Score=420, Expect=2e-143]} {Smed: dd_Smed_v6_3916_0_1, dd_Smed_v6_3916_0_1, [RH, Score=429, Expect=5e-147]} {RNA1509_5497} {RNA1310_11706} {RNA815_6713} |
| 5. | MligTC455_37688 | 246 | 5.12 | Mlig455_059640 | Neo: - Age: Down-Up-Down |
0.964 | - | - | - | 0.964 | - | - | Mlig455_059640 {REF} {Length: 2286} {NoTransDecoderORF} {RNA1509_41398, RNA1509_47923} {RNA1310_42251.1, RNA1509_47923} {RNA1509_47923, RNA815_43706} | |
| 6. | MligTC455_45247 | 241 | 5.02 | Mlig455_011888 | Neo: - Age: Down-Up-Up |
NLK | 0.964 | - | - | - | 0.964 | - | - | Mlig455_011888 {REF} {Length: 3725} {Pfam: Protein kinase domain [PF00069.27, score=208.6]; Protein tyrosine and serine/threonine kinase [PF07714.19, score=94.9]; ABC1 atypical kinase-like domain [PF03109.18, score=19.9]; Fungal protein kinase [PF17667.3, score=19.4]} {Human: ENSG00000087095, NLK, nemo like kinase, [RH, Score=445, Expect=8e-151]} {Mouse: ENSMUSG00000017376, Nlk, nemo like kinase, [RH, Score=445, Expect=6e-151]} {Dmel: FBgn0011817, nmo, nemo, [RH, Score=450, Expect=2e-154]} {Celegans: WBGene00003048, lit-1, Serine/threonine kinase NLK, [RH, Score=394, Expect=1e-130]} {Smed: dd_Smed_v6_4172_0_3, dd_Smed_v6_4172_0_3, [RH, Score=431, Expect=1e-146]} {RNA1509_38882, RNA1509_6933} {RNA1310_7196.1, RNA1509_38882} {RNA1509_38882, RNA815_3487.2} |
| 7. | MligTC455_34165 | 1247 | 25.99 | Mlig455_044821 | Neo: - Age: Up-Down-Up |
MYH6 | 0.962 | - | - | - | 0.962 | - | - | Mlig455_044821 {REF} {Length: 8028} {Pfam: Myosin head (motor domain) [PF00063.23, score=936.2]; Myosin tail [PF01576.21, score=581.5]; Myosin N-terminal SH3-like domain [PF02736.21, score=58.5]; Protein of unknown function (DUF1664) [PF07889.14, score=41.0]; Crescentin protein [PF19220.2, score=36.6]} {Human: ENSG00000197616, MYH6, myosin heavy chain 6, [RH, Score=2093, Expect=0.0]; ENSG00000092054, MYH7, myosin heavy chain 7, [RH, Score=2086, Expect=0.0]; ENSG00000109061, MYH1, myosin heavy chain 1, [RH, Score=2045, Expect=0.0]; ENSG00000125414, MYH2, myosin heavy chain 2, [RH, Score=2044, Expect=0.0]; ENSG00000133020, MYH8, myosin heavy chain 8, [RH, Score=2035, Expect=0.0]; ENSG00000264424, MYH4, myosin heavy chain 4, [RH, Score=2033, Expect=0.0]; ENSG00000109063, MYH3, myosin heavy chain 3, [RH, Score=1994, Expect=0.0]} {Mouse: ENSMUSG00000040752, Myh6, myosin, heavy polypeptide 6, cardiac muscle, alpha, [RH, Score=2090, Expect=0.0]; ENSMUSG00000053093, Myh7, myosin, heavy polypeptide 7, cardiac muscle, beta, [RH, Score=2084, Expect=0.0]; ENSMUSG00000057003, Myh4, myosin, heavy polypeptide 4, skeletal muscle, [RH, Score=2080, Expect=0.0]; ENSMUSG00000056328, Myh1, myosin, heavy polypeptide 1, skeletal muscle, adult, [RH, Score=2056, Expect=0.0]; ENSMUSG00000033196, Myh2, myosin, heavy polypeptide 2, skeletal muscle, adult, [RH, Score=2053, Expect=0.0]; ENSMUSG00000055775, Myh8, myosin, heavy polypeptide 8, skeletal muscle, perinatal, [RH, Score=2043, Expect=0.0]; ENSMUSG00000020908, Myh3, myosin, heavy polypeptide 3, skeletal muscle, embryonic, [RH, Score=2001, Expect=0.0]; ENSMUSG00000060180, Myh13, myosin, heavy polypeptide 13, skeletal muscle, [RH, Score=2001, Expect=0.0]} {Dmel: FBgn0264695, Mhc, Myosin heavy chain, [RH, Score=2114, Expect=0.0]} {Celegans: WBGene00019064, myo-5, MYOsin heavy chain structural genes, [RH, Score=1969, Expect=0.0]} {Smed: dd_Smed_v6_579_0_1, dd_Smed_v6_579_0_1, [RH, Score=2701, Expect=0.0]} {RNA1509_4871} {RNA1310_412.1} {RNA815_129.1} |
| 8. | MligTC455_45213 | 458 | 9.54 | Mlig455_025798 | Neo: - Age: Up-Down-Down |
PARP1 | 0.962 | - | - | - | 0.962 | - | - | Mlig455_025798 {REF} {Length: 10432} {TRANSSPLICED} {Pfam: Ankyrin repeats (3 copies) [PF12796.9, score=238.2]; Ankyrin repeats (many copies) [PF13637.8, score=214.8]; Ankyrin repeat [PF00023.32, score=149.8]; Ankyrin repeats (many copies) [PF13857.8, score=145.5]; Ankyrin repeat [PF13606.8, score=141.7]; Poly(ADP-ribose) polymerase catalytic domain [PF00644.22, score=77.2]; WGR domain [PF05406.17, score=66.7]; Poly(ADP-ribose) polymerase, regulatory domain [PF02877.16, score=51.9]} {Human: ENSG00000143799, PARP1, poly(ADP-ribose) polymerase 1, [Score=150, Expect=1e-35]} {Mouse: ENSMUSG00000026496, Parp1, poly (ADP-ribose) polymerase family, member 1, [Score=147, Expect=9e-35]} {Dmel: FBgn0010247, Parp, Poly-(ADP-ribose) polymerase, [Score=129, Expect=2e-29]} {Celegans: WBGene00004053, tank-1, Tankyrase-like protein, [RH, Score=188, Expect=4e-47]} {Smed: dd_Smed_v6_10338_0_1, dd_Smed_v6_10338_0_1, [Score=131, Expect=3e-30]} {RNA1509_5179, RNA1509_5717} {RNA1310_174.1, RNA1509_5179, RNA1509_5717} {RNA1509_5179, RNA1509_5717, RNA815_1091} |
| 9. | MligTC455_36483 | 572 | 11.91 | Mlig455_050189 | Neo: - Age: - |
0.96 | - | - | - | 0.960 | - | - | Mlig455_050189 {REF} {Length: 1797} {TRANSSPLICED} {Pfam: Soluble NSF attachment protein, SNAP [PF14938.8, score=64.3]} {RNA1509_49807, RNA1509_51105, RNA1509_56141} {RNA1310_16558, RNA1509_49807, RNA1509_51105, RNA1509_56141} {RNA1509_49807, RNA1509_51105, RNA1509_56141, RNA815_8079} | |
| 10. | MligTC455_47139 | 2009 | 41.85 | Mlig455_044514 | Neo: - Age: logFC(26M/2M)=0.379 |
HSPA5 | 0.958 | - | - | - | 0.958 | - | - | Mlig455_044514 {REF} {Length: 3227} {TRANSSPLICED} {Pfam: Hsp70 protein [PF00012.22, score=111.5]} {Human: ENSG00000044574, HSPA5, heat shock protein family A (Hsp70) member 5, [Score=197, Expect=1e-57]} {Mouse: ENSMUSG00000026864, Hspa5, heat shock protein 5, [Score=199, Expect=3e-58]} {Dmel: FBgn0001218, Hsc70-3, Heat shock 70-kDa protein cognate 3, [Score=186, Expect=7e-54]} {Celegans: WBGene00002007, hsp-3, Heat shock 70 kDa protein C, [Score=190, Expect=2e-58]} {Smed: dd_Smed_v6_2648_0_1, dd_Smed_v6_2648_0_1, [Score=228, Expect=2e-69]} {RNA1509_14123, RNA1509_23097, RNA1509_25501, RNA1509_31115, RNA1509_37821} {RNA1310_10295, RNA1509_14123, RNA1509_23097, RNA1509_31115, RNA1509_37821} {RNA1509_14123, RNA1509_23097, RNA1509_31115, RNA1509_37821, RNA815_3701} |
| 11. | MligTC455_37017 | 345 | 7.2 | Mlig455_035238 | Neo: - Age: - |
0.954 | - | - | - | 0.954 | - | - | Mlig455_035238 {REF} {Length: 1969} {TRANSSPLICED} {Pfam: Profilin [PF00235.21, score=70.1]} {Celegans: WBGene00003991, pfn-3, Profilin-3, [Score=50.4, Expect=9e-09]} {RNA1509_18199, RNA1509_28431} {RNA1310_37032.1, RNA1509_28431} {RNA1509_28431, RNA815_15418} | |
| 12. | MligTC455_37816 | 417 | 8.68 | Mlig455_039722 | Neo: - Age: - |
0.952 | - | - | - | 0.952 | - | - | Mlig455_039722 {REF} {Length: 3491} {Pfam: Domain of unknown function (DUF4139) [PF13598.8, score=126.5]; N-terminal domain of unknown function (DUF4140) [PF13600.8, score=58.5]} {Celegans: WBGene00016877, C52D10.3, [Score=223, Expect=5e-64]} {Smed: dd_Smed_v6_3629_0_3, dd_Smed_v6_3629_0_3, [Score=356, Expect=4e-114]} {RNA1509_39697} {RNA1310_4611.1} {RNA815_16159} | |
| 13. | MligTC455_10201 | 32 | 0.66 | Mlig455_063510 | Neo: - Age: Up-Down-Down Region-enriched R4: 5.161/0.01817 |
0.95 | - | - | - | 0.950 | - | - | Mlig455_063510 {REF} {Length: 377} {RNA1509_57251} {RNA1310_40651} {RNA815_22600.1} |
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