Data search
Results for MligTC455_49643
| Cluster | Total UMI counts | Global CPM | Transcripts | Categories | Human homolog | Annotation |
|---|---|---|---|---|---|---|
| MligTC455_49643 | 1190 | 24.79 | Mlig455_035158 | Neo: - Age: - |
GRAMD1B | Mlig455_035158 {REF} {Length: 3651} {TRANSSPLICED} {Pfam: VAD1 Analog of StAR-related lipid transfer domain [PF16016.7, score=89.9]; GRAM domain [PF02893.22, score=69.8]} {Human: ENSG00000023171, GRAMD1B, GRAM domain containing 1B, [RH, Score=224, Expect=1e-62]; ENSG00000178075, GRAMD1C, GRAM domain containing 1C, [RH, Score=219, Expect=5e-61]} {Mouse: ENSMUSG00000040111, Gramd1b, GRAM domain containing 1B, [RH, Score=223, Expect=3e-62]; ENSMUSG00000036292, Gramd1c, GRAM domain containing 1C, [RH, Score=212, Expect=1e-58]} {Dmel: FBgn0085423, CG34394, [Score=142, Expect=2e-34]} {Celegans: WBGene00022593, ZC328.3, [RH, Score=132, Expect=8e-32]} {Smed: dd_Smed_v6_9149_0_1, dd_Smed_v6_9149_0_1, [RH, Score=188, Expect=5e-51]} {RNA1509_11905, RNA1509_14267} {RNA1310_5700, RNA1509_11905, RNA1509_14267} {RNA1509_11905, RNA1509_14267, RNA815_13670} |
Cumulative graph for MligTC455_49643
Region-enriched expression
| Region | logFC | logCPM | Pvalue | FDR | Specificity |
|---|---|---|---|---|---|
| RegionR1 | -0.901 | 4.818 | 0.28954 | 0.94131 | |
| RegionR2 | -0.45 | 4.818 | 0.21162 | 0.57617 | |
| RegionR3 | -0.222 | 4.818 | 0.46741 | 0.97396 | |
| RegionR4 | 0.539 | 4.818 | 0.12175 | 0.35000 | |
| RegionR5 | 0.054 | 4.818 | 0.84711 | 1.00000 | |
| RegionR6 | 0.441 | 4.818 | 0.12965 | 0.65052 | |
| RegionR7 | 0.574 | 4.818 | 0.09022 | 0.57526 | |
| RegionR8 | -0.036 | 4.818 | 0.93766 | 1.00000 |
Regeneration-enriched expression
| Region | logFC | logCPM | PValue | FDR | Specificity |
|---|---|---|---|---|---|
| RegenerationR1 | -1.6 | 4.818 | 0.30715 | 1.00000 | |
| RegenerationR2 | -0.169 | 4.818 | 0.59478 | 0.91319 | |
| RegenerationR3 | -0.447 | 4.818 | 0.19389 | 0.62946 | |
| RegenerationR4 | -0.769 | 4.818 | 0.02605 | 0.25910 | |
| RegenerationR5 | -0.204 | 4.818 | 0.53314 | 0.87614 | |
| RegenerationR6 | -0.687 | 4.818 | 0.04408 | 0.26245 | |
| RegenerationBL | -0.45 | 4.818 | 0.23267 | 0.58450 | |
| RegenerationTP | -0.978 | 4.818 | 0.02242 | 0.25496 |
Genes with expression patterns similar to MligTC455_49643
| Nr. | Cluster | Total UMI counts | Global CPM | Transcripts | Categories | Human homolog | Σ Spearman correlations | Int1 | Int2 | Int3 | Reg1 | Reg2 | Reg3 | Annotation |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1. | MligTC455_49643 | 1190 | 24.79 | Mlig455_035158 | Neo: - Age: - |
GRAMD1B | 6 | 1.000 | 1.000 | 1.000 | 1.000 | 1.000 | 1.000 | Mlig455_035158 {REF} {Length: 3651} {TRANSSPLICED} {Pfam: VAD1 Analog of StAR-related lipid transfer domain [PF16016.7, score=89.9]; GRAM domain [PF02893.22, score=69.8]} {Human: ENSG00000023171, GRAMD1B, GRAM domain containing 1B, [RH, Score=224, Expect=1e-62]; ENSG00000178075, GRAMD1C, GRAM domain containing 1C, [RH, Score=219, Expect=5e-61]} {Mouse: ENSMUSG00000040111, Gramd1b, GRAM domain containing 1B, [RH, Score=223, Expect=3e-62]; ENSMUSG00000036292, Gramd1c, GRAM domain containing 1C, [RH, Score=212, Expect=1e-58]} {Dmel: FBgn0085423, CG34394, [Score=142, Expect=2e-34]} {Celegans: WBGene00022593, ZC328.3, [RH, Score=132, Expect=8e-32]} {Smed: dd_Smed_v6_9149_0_1, dd_Smed_v6_9149_0_1, [RH, Score=188, Expect=5e-51]} {RNA1509_11905, RNA1509_14267} {RNA1310_5700, RNA1509_11905, RNA1509_14267} {RNA1509_11905, RNA1509_14267, RNA815_13670} |
| 2. | MligTC455_29980 | 27384 | 570.51 | Mlig455_063970 | Neo: - Age: - Regeneration-upregulated BL: 1.061 Regeneration-enriched BL: 1.061 |
DYNLL2 | 0.957 | - | - | - | - | - | 0.957 | Mlig455_063970 {REF} {Length: 1043} {Pfam: Dynein light chain type 1 [PF01221.20, score=71.4]} {Human: ENSG00000264364, DYNLL2, dynein light chain LC8-type 2, [Score=50.4, Expect=3e-09]; ENSG00000088986, DYNLL1, dynein light chain LC8-type 1, [Score=49.3, Expect=7e-09]} {Mouse: ENSMUSG00000020483, Dynll2, dynein light chain LC8-type 2, [Score=50.4, Expect=2e-09]; ENSMUSG00000064063, BC048507, cDNA sequence BC048507, [Score=50.1, Expect=2e-09]; ENSMUSG00000009013, Dynll1, dynein light chain LC8-type 1, [Score=49.3, Expect=4e-09]} {Dmel: FBgn0011760, ctp, cut up, [Score=48.5, Expect=8e-09]} {Celegans: WBGene00001005, dlc-1, Dynein light chain 1, cytoplasmic, [Score=48.9, Expect=4e-09]} {Smed: dd_Smed_v6_11037_0_1, dd_Smed_v6_11037_0_1, [Score=55.5, Expect=2e-11]} {RNA1509_360, RNA1509_38199} {RNA1310_2610.4, RNA1509_360, RNA1509_38199} {RNA1509_360, RNA1509_38199, RNA815_788.1} |
| 3. | MligTC455_35958 | 770 | 16.04 | Mlig455_026638 | Neo: - Age: Up-Down-Up |
RAB32 | 0.953 | - | - | - | 0.953 | - | - | Mlig455_026638 {REF} {Length: 3064} {TRANSSPLICED} {Pfam: Ras family [PF00071.24, score=147.9]; Ras of Complex, Roc, domain of DAPkinase [PF08477.15, score=102.9]; ADP-ribosylation factor family [PF00025.23, score=55.1]; 50S ribosome-binding GTPase [PF01926.25, score=24.9]; Gtr1/RagA G protein conserved region [PF04670.14, score=24.4]; Signal recognition particle receptor beta subunit [PF09439.12, score=24.3]; Elongation factor Tu GTP binding domain [PF00009.29, score=23.2]; Conserved hypothetical ATP binding protein [PF03029.19, score=23.1]; RsgA GTPase [PF03193.18, score=19.0]} {Human: ENSG00000118508, RAB32, RAB32, member RAS oncogene family, [Score=184, Expect=8e-58]; ENSG00000123892, RAB38, RAB38, member RAS oncogene family, [Score=177, Expect=1e-55]} {Mouse: ENSMUSG00000019832, Rab32, RAB32, member RAS oncogene family, [Score=182, Expect=2e-57]; ENSMUSG00000030559, Rab38, RAB38, member RAS oncogene family, [Score=177, Expect=8e-56]} {Dmel: FBgn0002567, Rab32, [Score=190, Expect=6e-61]} {Celegans: WBGene00011083, glo-1, Gut granule LOss; Rab GTPase GLO-1, [Score=159, Expect=1e-48]} {Smed: dd_Smed_v6_1037_0_1, dd_Smed_v6_1037_0_1, [Score=161, Expect=9e-50]} {RNA1509_49076} {RNA1310_25952} {RNA815_23958.2} |
Berezikov Lab - 2020-2021 © ERIBA